RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 RAB12Q6IQ22 244 aa10.61□□□□□ -0.71
UBE3D-206ENST00000505226 UQCC3Q6UW78 93 aa10.61□□□□□ -0.71
UBE3D-206ENST00000505226 CHST4Q8NCG5 386 aa10.61□□□□□ -0.71
UBE3D-206ENST00000505226 FGGYQ96C11 551 aa10.61□□□□□ -0.71
UBE3D-206ENST00000505226 FOXQ1Q9C009 403 aa10.61□□□□□ -0.71
UBE3D-206ENST00000505226 CYB5R1Q9UHQ9 305 aa10.61□□□□□ -0.71
UBE3D-206ENST00000505226 MKL2Q9ULH7 1088 aa10.61□□□□□ -0.71
UBE3D-206ENST00000505226 THADAQ6YHU6 1953 aa10.61□□□□□ -0.71
UBE3D-206ENST00000505226 MSGN1A6NI15 193 aa10.61□□□□□ -0.71
UBE3D-206ENST00000505226 H0YIG0 161 aa10.61□□□□□ -0.71
UBE3D-206ENST00000505226 OR2T1O43869 369 aa10.61□□□□□ -0.71
UBE3D-206ENST00000505226 DDAH2O95865 285 aa10.61□□□□□ -0.71
UBE3D-206ENST00000505226 PMP2P02689 132 aa10.61□□□□□ -0.71
UBE3D-206ENST00000505226 IGKV3-11P04433 115 aa10.61□□□□□ -0.71
UBE3D-206ENST00000505226 IGHV4-34P06331 123 aa10.61□□□□□ -0.71
UBE3D-206ENST00000505226 CRHP06850 196 aa10.61□□□□□ -0.71
UBE3D-206ENST00000505226 AKT2P31751 481 aa10.61□□□□□ -0.71
UBE3D-206ENST00000505226 SERPINF1P36955 418 aa10.61□□□□□ -0.71
UBE3D-206ENST00000505226 NPBWR1P48145 328 aa10.61□□□□□ -0.71
UBE3D-206ENST00000505226 DCDP81605 110 aaKnown RBP10.61□□□□□ -0.71
UBE3D-206ENST00000505226 SCRN3Q0VDG4 424 aa10.61□□□□□ -0.71
UBE3D-206ENST00000505226 FZD2Q14332 565 aa10.61□□□□□ -0.71
UBE3D-206ENST00000505226 MEF2DQ14814 521 aa10.61□□□□□ -0.71
UBE3D-206ENST00000505226 C10orf91Q5T1B1 145 aa10.61□□□□□ -0.71
UBE3D-206ENST00000505226 ZSCAN4Q8NAM6 433 aaPredicted RBP10.61□□□□□ -0.71
UBE3D-206ENST00000505226 INO80EQ8NBZ0 244 aaPredicted RBP10.61□□□□□ -0.71
UBE3D-206ENST00000505226 THAP6Q8TBB0 222 aa10.61□□□□□ -0.71
UBE3D-206ENST00000505226 PHOSPHO2Q8TCD6 241 aa10.61□□□□□ -0.71
UBE3D-206ENST00000505226 GPR119Q8TDV5 335 aa10.61□□□□□ -0.71
UBE3D-206ENST00000505226 ELP5Q8TE02 316 aa10.61□□□□□ -0.71
UBE3D-206ENST00000505226 ZNF721Q8TF20 911 aa10.61□□□□□ -0.71
UBE3D-206ENST00000505226 TMED6Q8WW62 240 aa10.61□□□□□ -0.71
UBE3D-206ENST00000505226 PHB2Q99623 299 aa10.61□□□□□ -0.71
UBE3D-206ENST00000505226 TMEM100Q9NV29 134 aa10.61□□□□□ -0.71
UBE3D-206ENST00000505226 NDRG3Q9UGV2 375 aa10.61□□□□□ -0.71
UBE3D-206ENST00000505226 FBXO9Q9UK97 447 aaPredicted RBP10.61□□□□□ -0.71
UBE3D-206ENST00000505226 A0A0B4J2A0 478 aa10.6□□□□□ -0.71
UBE3D-206ENST00000505226 H7C2Y5 167 aa10.6□□□□□ -0.71
UBE3D-206ENST00000505226 FAM157CP0CG43 387 aa10.6□□□□□ -0.71
UBE3D-206ENST00000505226 VSIG8P0DPA2 414 aa10.6□□□□□ -0.71
UBE3D-206ENST00000505226 MPZP25189 248 aa10.6□□□□□ -0.71
UBE3D-206ENST00000505226 OR1D4P47884 311 aa10.6□□□□□ -0.71
UBE3D-206ENST00000505226 MST1LQ2TV78 715 aa10.6□□□□□ -0.71
UBE3D-206ENST00000505226 ZNF528Q3MIS6 628 aa10.6□□□□□ -0.71
UBE3D-206ENST00000505226 GTPBP8Q8N3Z3 284 aaPredicted RBP10.6□□□□□ -0.71
UBE3D-206ENST00000505226 MARCH1Q8TCQ1 289 aa10.6□□□□□ -0.71
UBE3D-206ENST00000505226 FOXRED1Q96CU9 486 aaPredicted RBP10.6□□□□□ -0.71
UBE3D-206ENST00000505226 ADAT3Q96EY9 351 aaPredicted RBP10.6□□□□□ -0.71
UBE3D-206ENST00000505226 NICN1Q9BSH3 213 aa10.6□□□□□ -0.71
UBE3D-206ENST00000505226 SHPKQ9UHJ6 478 aa10.6□□□□□ -0.71
UBE3D-206ENST00000505226 A0A0A6YYH2 397 aa10.6□□□□□ -0.71
UBE3D-206ENST00000505226 TMEM269A0A1B0GVZ9 245 aa10.6□□□□□ -0.71
UBE3D-206ENST00000505226 FRG2CA6NGY1 282 aa10.6□□□□□ -0.71
UBE3D-206ENST00000505226 A6NJ64 397 aa10.6□□□□□ -0.71
UBE3D-206ENST00000505226 ISG15P05161 165 aa10.6□□□□□ -0.71
UBE3D-206ENST00000505226 ANOS1P23352 680 aa10.6□□□□□ -0.71
UBE3D-206ENST00000505226 PSMB6P28072 239 aa10.6□□□□□ -0.71
UBE3D-206ENST00000505226 CTHP32929 405 aa10.6□□□□□ -0.71
UBE3D-206ENST00000505226 PHF19Q5T6S3 580 aa10.6□□□□□ -0.71
UBE3D-206ENST00000505226 TMEM151BQ8IW70 566 aa10.6□□□□□ -0.71
UBE3D-206ENST00000505226 SVBPQ8N300 66 aa10.6□□□□□ -0.71
UBE3D-206ENST00000505226 ZDHHC22Q8N966 263 aa10.6□□□□□ -0.71
UBE3D-206ENST00000505226 SLC26A10Q8NG04 563 aa10.6□□□□□ -0.71
UBE3D-206ENST00000505226 OR4K17Q8NGC6 315 aa10.6□□□□□ -0.71
UBE3D-206ENST00000505226 CHMP1AQ9HD42 196 aaPredicted RBP10.6□□□□□ -0.71
UBE3D-206ENST00000505226 ACKR4Q9NPB9 350 aa10.6□□□□□ -0.71
UBE3D-206ENST00000505226 PHF3Q92576 2039 aaKnown RBP10.6□□□□□ -0.71
UBE3D-206ENST00000505226 TMED7-TICAM2A0A0A6YYA0 188 aa10.6□□□□□ -0.71
UBE3D-206ENST00000505226 C5orf51A6NDU8 294 aa10.6□□□□□ -0.71
UBE3D-206ENST00000505226 EIF1AYO14602 144 aaKnown RBP10.6□□□□□ -0.71
UBE3D-206ENST00000505226 AKR1D1P51857 326 aa10.6□□□□□ -0.71
UBE3D-206ENST00000505226 GFERP55789 205 aa10.6□□□□□ -0.71
UBE3D-206ENST00000505226 HAGHLQ6PII5 290 aaPredicted RBP10.6□□□□□ -0.71
UBE3D-206ENST00000505226 TMEM200AQ86VY9 491 aa10.6□□□□□ -0.71
UBE3D-206ENST00000505226 C9orf40Q8IXQ3 194 aa10.6□□□□□ -0.71
UBE3D-206ENST00000505226 STOML3Q8TAV4 291 aa10.6□□□□□ -0.71
UBE3D-206ENST00000505226 PTX4Q96A99 478 aa10.6□□□□□ -0.71
UBE3D-206ENST00000505226 SLC46A1Q96NT5 459 aa10.6□□□□□ -0.71
UBE3D-206ENST00000505226 SPACA5Q96QH8 159 aa10.6□□□□□ -0.71
UBE3D-206ENST00000505226 ZNF629Q9UEG4 869 aaPredicted RBP10.6□□□□□ -0.71
UBE3D-206ENST00000505226 MLXQ9UH92 298 aa10.6□□□□□ -0.71
UBE3D-206ENST00000505226 RAB22AQ9UL26 194 aa10.6□□□□□ -0.71
UBE3D-206ENST00000505226 IGHV5-51A0A0C4DH38 117 aa10.59□□□□□ -0.71
UBE3D-206ENST00000505226 TEX13DA0A0J9YY54 714 aaPredicted RBP10.59□□□□□ -0.71
UBE3D-206ENST00000505226 MEGF11A6BM72 1044 aa10.59□□□□□ -0.71
UBE3D-206ENST00000505226 DUS4LO95620 317 aaKnown RBP10.59□□□□□ -0.71
UBE3D-206ENST00000505226 NFYBP25208 207 aa10.59□□□□□ -0.71
UBE3D-206ENST00000505226 NR0B1P51843 470 aaKnown RBP10.59□□□□□ -0.71
UBE3D-206ENST00000505226 GLO1Q04760 184 aa10.59□□□□□ -0.71
UBE3D-206ENST00000505226 C1orf140Q5VVS0 124 aa10.59□□□□□ -0.71
UBE3D-206ENST00000505226 ARMC10Q8N2F6 343 aa10.59□□□□□ -0.71
UBE3D-206ENST00000505226 SLC30A7Q8NEW0 376 aa10.59□□□□□ -0.71
UBE3D-206ENST00000505226 DCUN1D4Q92564 292 aa10.59□□□□□ -0.71
UBE3D-206ENST00000505226 ZNF285Q96NJ3 590 aa10.59□□□□□ -0.71
UBE3D-206ENST00000505226 A0A0A6YYD4 124 aa10.59□□□□□ -0.71
UBE3D-206ENST00000505226 SPTY2D1-AS1A0A0U1RR47 76 aa10.59□□□□□ -0.71
UBE3D-206ENST00000505226 OR5K4A6NMS3 321 aa10.59□□□□□ -0.71
UBE3D-206ENST00000505226 F8W036 122 aa10.59□□□□□ -0.71
UBE3D-206ENST00000505226 NUDT21O43809 227 aaKnown RBP10.59□□□□□ -0.71
UBE3D-206ENST00000505226 ADAP1O75689 374 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms