RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 ERMAPQ96PL5 475 aaPredicted RBP13.45□□□□□ -0.26
PDLIM7-213ENST00000505074 GPX7Q96SL4 187 aaPredicted RBP13.45□□□□□ -0.26
PDLIM7-213ENST00000505074 MRI1Q9BV20 369 aa13.45□□□□□ -0.26
PDLIM7-213ENST00000505074 MS4A7Q9GZW8 240 aaPredicted RBP13.45□□□□□ -0.26
PDLIM7-213ENST00000505074 FAM107BQ9H098 131 aa13.45□□□□□ -0.26
PDLIM7-213ENST00000505074 PATZ1Q9HBE1 687 aaKnown RBP13.45□□□□□ -0.26
PDLIM7-213ENST00000505074 BEX1Q9HBH7 125 aa13.45□□□□□ -0.26
PDLIM7-213ENST00000505074 SPAG4Q9NPE6 437 aa13.45□□□□□ -0.26
PDLIM7-213ENST00000505074 OR5V1Q9UGF6 321 aa13.45□□□□□ -0.26
PDLIM7-213ENST00000505074 AUP1Q9Y679 476 aa13.45□□□□□ -0.26
PDLIM7-213ENST00000505074 IGHV3-64DA0A0J9YX35 117 aa13.44□□□□□ -0.26
PDLIM7-213ENST00000505074 PTP4A3O75365 173 aa13.44□□□□□ -0.26
PDLIM7-213ENST00000505074 RENP00797 406 aa13.44□□□□□ -0.26
PDLIM7-213ENST00000505074 RAC2P15153 192 aa13.44□□□□□ -0.26
PDLIM7-213ENST00000505074 CRABP1P29762 137 aa13.44□□□□□ -0.26
PDLIM7-213ENST00000505074 CDKN2AP42771 156 aaKnown RBP13.44□□□□□ -0.26
PDLIM7-213ENST00000505074 MTNR1AP48039 350 aa13.44□□□□□ -0.26
PDLIM7-213ENST00000505074 SEC61A1P61619 476 aaKnown RBP13.44□□□□□ -0.26
PDLIM7-213ENST00000505074 SPIBQ01892 262 aa13.44□□□□□ -0.26
PDLIM7-213ENST00000505074 SEC23BQ15437 767 aa13.44□□□□□ -0.26
PDLIM7-213ENST00000505074 TMEM155Q4W5P6 130 aa13.44□□□□□ -0.26
PDLIM7-213ENST00000505074 KLF17Q5JT82 389 aaPredicted RBP13.44□□□□□ -0.26
PDLIM7-213ENST00000505074 ZNF362Q5T0B9 420 aaPredicted RBP13.44□□□□□ -0.26
PDLIM7-213ENST00000505074 SLC27A4Q6P1M0 643 aa13.44□□□□□ -0.26
PDLIM7-213ENST00000505074 PGM2L1Q6PCE3 622 aa13.44□□□□□ -0.26
PDLIM7-213ENST00000505074 SMARCD3Q6STE5 483 aa13.44□□□□□ -0.26
PDLIM7-213ENST00000505074 MUC20Q8N307 709 aaPredicted RBP13.44□□□□□ -0.26
PDLIM7-213ENST00000505074 KIR3DL3Q8N743 410 aa13.44□□□□□ -0.26
PDLIM7-213ENST00000505074 DEFB108BQ8NET1 73 aa13.44□□□□□ -0.26
PDLIM7-213ENST00000505074 GJC3Q8NFK1 279 aa13.44□□□□□ -0.26
PDLIM7-213ENST00000505074 ZNF420Q8TAQ5 688 aaPredicted RBP13.44□□□□□ -0.26
PDLIM7-213ENST00000505074 APOBEC3DQ96AK3 386 aaPredicted RBP13.44□□□□□ -0.26
PDLIM7-213ENST00000505074 ZNF582Q96NG8 517 aaPredicted RBP13.44□□□□□ -0.26
PDLIM7-213ENST00000505074 CITED1Q99966 193 aa13.44□□□□□ -0.26
PDLIM7-213ENST00000505074 HDHD2Q9H0R4 259 aa13.44□□□□□ -0.26
PDLIM7-213ENST00000505074 WDR76Q9H967 626 aa13.44□□□□□ -0.26
PDLIM7-213ENST00000505074 MMP26Q9NRE1 261 aa13.44□□□□□ -0.26
PDLIM7-213ENST00000505074 ABCD2Q9UBJ2 740 aa13.44□□□□□ -0.26
PDLIM7-213ENST00000505074 ZNF205O95201 554 aa13.43□□□□□ -0.26
PDLIM7-213ENST00000505074 GADD45GO95257 159 aa13.43□□□□□ -0.26
PDLIM7-213ENST00000505074 RPS2P15880 293 aaKnown RBP13.43□□□□□ -0.26
PDLIM7-213ENST00000505074 NOS3P29474 1203 aa13.43□□□□□ -0.26
PDLIM7-213ENST00000505074 MDH2P40926 338 aaKnown RBP13.43□□□□□ -0.26
PDLIM7-213ENST00000505074 SRP9P49458 86 aaKnown RBP13.43□□□□□ -0.26
PDLIM7-213ENST00000505074 MMP16P51512 607 aa13.43□□□□□ -0.26
PDLIM7-213ENST00000505074 ZNF154Q13106 437 aa13.43□□□□□ -0.26
PDLIM7-213ENST00000505074 CORO6Q6QEF8 472 aa13.43□□□□□ -0.26
PDLIM7-213ENST00000505074 LRRC28Q86X40 367 aaPredicted RBP13.43□□□□□ -0.26
PDLIM7-213ENST00000505074 FAM86B1Q8N7N1 296 aa13.43□□□□□ -0.26
PDLIM7-213ENST00000505074 OR13G1Q8NGZ3 307 aa13.43□□□□□ -0.26
PDLIM7-213ENST00000505074 OR4F5Q8NH21 305 aa13.43□□□□□ -0.26
PDLIM7-213ENST00000505074 ELAC2Q9BQ52 826 aaKnown RBP13.43□□□□□ -0.26
PDLIM7-213ENST00000505074 IFT27Q9BW83 186 aa13.43□□□□□ -0.26
PDLIM7-213ENST00000505074 SRA1Q9HD15 236 aaKnown RBP13.43□□□□□ -0.26
PDLIM7-213ENST00000505074 MED4Q9NPJ6 270 aa13.43□□□□□ -0.26
PDLIM7-213ENST00000505074 DCAF13Q9NV06 445 aaKnown RBP13.43□□□□□ -0.26
PDLIM7-213ENST00000505074 ATPIF1Q9UII2 106 aa13.43□□□□□ -0.26
PDLIM7-213ENST00000505074 TMEM178BH3BS89 294 aa13.42□□□□□ -0.26
PDLIM7-213ENST00000505074 J3QW42 95 aa13.42□□□□□ -0.26
PDLIM7-213ENST00000505074 OR10H3O60404 316 aa13.42□□□□□ -0.26
PDLIM7-213ENST00000505074 CYB5R3P00387 301 aaPredicted RBP13.42□□□□□ -0.26
PDLIM7-213ENST00000505074 HLA-DQA2P01906 255 aa13.42□□□□□ -0.26
PDLIM7-213ENST00000505074 SLC6A6P31641 620 aa13.42□□□□□ -0.26
PDLIM7-213ENST00000505074 SLC6A9P48067 706 aa13.42□□□□□ -0.26
PDLIM7-213ENST00000505074 SMIM11AP58511 58 aa13.42□□□□□ -0.26
PDLIM7-213ENST00000505074 FXYD6P3P58550 94 aa13.42□□□□□ -0.26
PDLIM7-213ENST00000505074 FBXW12Q6X9E4 464 aa13.42□□□□□ -0.26
PDLIM7-213ENST00000505074 LINC00346Q8IVM7 164 aa13.42□□□□□ -0.26
PDLIM7-213ENST00000505074 OR8G5Q8NG78 346 aa13.42□□□□□ -0.26
PDLIM7-213ENST00000505074 MCUR1Q96AQ8 359 aa13.42□□□□□ -0.26
PDLIM7-213ENST00000505074 MEGF10Q96KG7 1140 aa13.42□□□□□ -0.26
PDLIM7-213ENST00000505074 C7orf34Q96L11 122 aa13.42□□□□□ -0.26
PDLIM7-213ENST00000505074 SIGLEC11Q96RL6 698 aa13.42□□□□□ -0.26
PDLIM7-213ENST00000505074 NMNAT3Q96T66 252 aa13.42□□□□□ -0.26
PDLIM7-213ENST00000505074 PITX2Q99697 317 aa13.42□□□□□ -0.26
PDLIM7-213ENST00000505074 COQ7Q99807 217 aa13.42□□□□□ -0.26
PDLIM7-213ENST00000505074 RBM4BQ9BQ04 359 aaKnown RBP13.42□□□□□ -0.26
PDLIM7-213ENST00000505074 CDADC1Q9BWV3 514 aa13.42□□□□□ -0.26
PDLIM7-213ENST00000505074 HCAR1Q9BXC0 346 aa13.42□□□□□ -0.26
PDLIM7-213ENST00000505074 OR52D1Q9H346 318 aa13.42□□□□□ -0.26
PDLIM7-213ENST00000505074 GCM1Q9NP62 436 aa13.42□□□□□ -0.26
PDLIM7-213ENST00000505074 RPRD1BQ9NQG5 326 aaKnown RBP13.42□□□□□ -0.26
PDLIM7-213ENST00000505074 LHFPL6Q9Y693 200 aa13.42□□□□□ -0.26
PDLIM7-213ENST00000505074 LRRC30A6NM36 301 aa13.41□□□□□ -0.26
PDLIM7-213ENST00000505074 CEACAM18A8MTB9 384 aa13.41□□□□□ -0.26
PDLIM7-213ENST00000505074 H0YL77 283 aa13.41□□□□□ -0.26
PDLIM7-213ENST00000505074 TRAPPC2LH3BP13 241 aa13.41□□□□□ -0.26
PDLIM7-213ENST00000505074 IFNL4K9M1U5 179 aa13.41□□□□□ -0.26
PDLIM7-213ENST00000505074 DCTN6O00399 190 aa13.41□□□□□ -0.26
PDLIM7-213ENST00000505074 TXNDC12O95881 172 aa13.41□□□□□ -0.26
PDLIM7-213ENST00000505074 CRYBA1P05813 215 aa13.41□□□□□ -0.26
PDLIM7-213ENST00000505074 ZNF12P17014 697 aa13.41□□□□□ -0.26
PDLIM7-213ENST00000505074 PRSS12P56730 875 aa13.41□□□□□ -0.26
PDLIM7-213ENST00000505074 DBPQ10586 325 aaPredicted RBP13.41□□□□□ -0.26
PDLIM7-213ENST00000505074 KCNMB1Q16558 191 aa13.41□□□□□ -0.26
PDLIM7-213ENST00000505074 OLFML2AQ68BL7 652 aa13.41□□□□□ -0.26
PDLIM7-213ENST00000505074 RHOUQ7L0Q8 258 aa13.41□□□□□ -0.26
PDLIM7-213ENST00000505074 MOGAT3Q86VF5 341 aa13.41□□□□□ -0.26
PDLIM7-213ENST00000505074 OR2AJ1Q8NGZ0 328 aa13.41□□□□□ -0.26
PDLIM7-213ENST00000505074 OR4K13Q8NH42 304 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms