RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 OR10D4PQ8NGN7 298 aa6.84□□□□□ -1.31
NEDD9-208ENST00000504387 TCTEX1D2Q8WW35 142 aa6.84□□□□□ -1.31
NEDD9-208ENST00000504387 MRPL38Q96DV4 380 aaKnown RBP6.84□□□□□ -1.31
NEDD9-208ENST00000504387 RBM18Q96H35 190 aaKnown RBP6.84□□□□□ -1.31
NEDD9-208ENST00000504387 UTP23Q9BRU9 249 aaKnown RBP6.84□□□□□ -1.31
NEDD9-208ENST00000504387 SEC11CQ9BY50 192 aa6.84□□□□□ -1.31
NEDD9-208ENST00000504387 PTGES2Q9H7Z7 377 aa6.84□□□□□ -1.31
NEDD9-208ENST00000504387 MMP26Q9NRE1 261 aa6.84□□□□□ -1.31
NEDD9-208ENST00000504387 LANCL2Q9NS86 450 aa6.84□□□□□ -1.31
NEDD9-208ENST00000504387 HRASLS2Q9NWW9 162 aa6.84□□□□□ -1.31
NEDD9-208ENST00000504387 CKLFQ9UBR5 152 aa6.84□□□□□ -1.31
NEDD9-208ENST00000504387 LPAR3Q9UBY5 353 aa6.84□□□□□ -1.31
NEDD9-208ENST00000504387 SERTAD3Q9UJW9 196 aa6.84□□□□□ -1.31
NEDD9-208ENST00000504387 C19orf53Q9UNZ5 99 aaPredicted RBP6.84□□□□□ -1.31
NEDD9-208ENST00000504387 TICRRQ7Z2Z1 1910 aa6.84□□□□□ -1.31
NEDD9-208ENST00000504387 FRYQ5TBA9 3013 aa6.84□□□□□ -1.31
NEDD9-208ENST00000504387 TDRD6O60522 2096 aaKnown RBP6.84□□□□□ -1.31
NEDD9-208ENST00000504387 FRYLO94915 3013 aa6.84□□□□□ -1.31
NEDD9-208ENST00000504387 C2orf72A6NCS6 295 aa6.84□□□□□ -1.31
NEDD9-208ENST00000504387 GPR37O15354 613 aa6.84□□□□□ -1.31
NEDD9-208ENST00000504387 MBTPS2O43462 519 aa6.84□□□□□ -1.31
NEDD9-208ENST00000504387 TIMP1P01033 207 aa6.84□□□□□ -1.31
NEDD9-208ENST00000504387 APODP05090 189 aa6.84□□□□□ -1.31
NEDD9-208ENST00000504387 ZNF735P0CB33 412 aa6.84□□□□□ -1.31
NEDD9-208ENST00000504387 SMIM6P0DI80 62 aa6.84□□□□□ -1.31
NEDD9-208ENST00000504387 SELLP14151 372 aa6.84□□□□□ -1.31
NEDD9-208ENST00000504387 NDUFB7P17568 137 aa6.84□□□□□ -1.31
NEDD9-208ENST00000504387 GLRA1P23415 457 aa6.84□□□□□ -1.31
NEDD9-208ENST00000504387 ZBTB25P24278 435 aa6.84□□□□□ -1.31
NEDD9-208ENST00000504387 LAP3P28838 519 aa6.84□□□□□ -1.31
NEDD9-208ENST00000504387 CASP6P55212 293 aa6.84□□□□□ -1.31
NEDD9-208ENST00000504387 CLDN6P56747 220 aa6.84□□□□□ -1.31
NEDD9-208ENST00000504387 PSG6Q00889 435 aa6.84□□□□□ -1.31
NEDD9-208ENST00000504387 CCINQ13939 588 aa6.84□□□□□ -1.31
NEDD9-208ENST00000504387 PRAMEF8Q5VWM4 474 aa6.84□□□□□ -1.31
NEDD9-208ENST00000504387 PRAMEF7Q5VXH5 474 aa6.84□□□□□ -1.31
NEDD9-208ENST00000504387 TMEM225Q6GV28 225 aa6.84□□□□□ -1.31
NEDD9-208ENST00000504387 UQCC3Q6UW78 93 aa6.84□□□□□ -1.31
NEDD9-208ENST00000504387 ZNF813Q6ZN06 617 aa6.84□□□□□ -1.31
NEDD9-208ENST00000504387 DPY19L2P2Q6ZN68 376 aa6.84□□□□□ -1.31
NEDD9-208ENST00000504387 SLC16A9Q7RTY1 509 aa6.84□□□□□ -1.31
NEDD9-208ENST00000504387 HSD17B11Q8NBQ5 300 aa6.84□□□□□ -1.31
NEDD9-208ENST00000504387 GPR119Q8TDV5 335 aa6.84□□□□□ -1.31
NEDD9-208ENST00000504387 MRGPRFQ96AM1 343 aa6.84□□□□□ -1.31
NEDD9-208ENST00000504387 FGGYQ96C11 551 aa6.84□□□□□ -1.31
NEDD9-208ENST00000504387 GAL3ST4Q96RP7 486 aa6.84□□□□□ -1.31
NEDD9-208ENST00000504387 LPAR4Q99677 370 aa6.84□□□□□ -1.31
NEDD9-208ENST00000504387 SLC25A21Q9BQT8 299 aaPredicted RBP6.84□□□□□ -1.31
NEDD9-208ENST00000504387 SMOC1Q9H4F8 434 aa6.84□□□□□ -1.31
NEDD9-208ENST00000504387 PMS2P1A4D2B8 440 aa6.84□□□□□ -1.32
NEDD9-208ENST00000504387 SLC17A2O00624 439 aa6.84□□□□□ -1.32
NEDD9-208ENST00000504387 XRCC2O43543 280 aa6.84□□□□□ -1.32
NEDD9-208ENST00000504387 TSPAN15O95858 294 aa6.84□□□□□ -1.32
NEDD9-208ENST00000504387 IFNA2P01563 188 aa6.84□□□□□ -1.32
NEDD9-208ENST00000504387 CA3P07451 260 aa6.84□□□□□ -1.32
NEDD9-208ENST00000504387 FAM157CP0CG43 387 aa6.84□□□□□ -1.32
NEDD9-208ENST00000504387 HOXB1P14653 301 aaPredicted RBP6.84□□□□□ -1.32
NEDD9-208ENST00000504387 FOSL1P15407 271 aa6.84□□□□□ -1.32
NEDD9-208ENST00000504387 GSK3AP49840 483 aa6.84□□□□□ -1.32
NEDD9-208ENST00000504387 RUNX3Q13761 415 aa6.84□□□□□ -1.32
NEDD9-208ENST00000504387 MESTQ5EB52 335 aa6.84□□□□□ -1.32
NEDD9-208ENST00000504387 ARMC6Q6NXE6 501 aa6.84□□□□□ -1.32
NEDD9-208ENST00000504387 FIGLAQ6QHK4 219 aa6.84□□□□□ -1.32
NEDD9-208ENST00000504387 CHRDL2Q6WN34 429 aa6.84□□□□□ -1.32
NEDD9-208ENST00000504387 CCDC54Q8NEL0 328 aa6.84□□□□□ -1.32
NEDD9-208ENST00000504387 LINC00615Q96LM1 132 aaPredicted RBP6.84□□□□□ -1.32
NEDD9-208ENST00000504387 C4orf45Q96LM5 186 aa6.84□□□□□ -1.32
NEDD9-208ENST00000504387 APOOQ9BUR5 198 aa6.84□□□□□ -1.32
NEDD9-208ENST00000504387 ELL3Q9HB65 397 aaPredicted RBP6.84□□□□□ -1.32
NEDD9-208ENST00000504387 CYTL1Q9NRR1 136 aa6.84□□□□□ -1.32
NEDD9-208ENST00000504387 MRPL22Q9NWU5 206 aaKnown RBP6.84□□□□□ -1.32
NEDD9-208ENST00000504387 PHF3Q92576 2039 aaKnown RBP6.84□□□□□ -1.32
NEDD9-208ENST00000504387 LRRK1Q38SD2 2015 aa6.83□□□□□ -1.32
NEDD9-208ENST00000504387 A0A1B0GTI1 187 aa6.83□□□□□ -1.32
NEDD9-208ENST00000504387 H0YGG7 62 aa6.83□□□□□ -1.32
NEDD9-208ENST00000504387 K7EQS6 105 aa6.83□□□□□ -1.32
NEDD9-208ENST00000504387 XKRYO14609 159 aa6.83□□□□□ -1.32
NEDD9-208ENST00000504387 YKT6O15498 198 aa6.83□□□□□ -1.32
NEDD9-208ENST00000504387 EFSO43281 561 aa6.83□□□□□ -1.32
NEDD9-208ENST00000504387 MPIG6BO95866 241 aa6.83□□□□□ -1.32
NEDD9-208ENST00000504387 EFEMP2O95967 443 aa6.83□□□□□ -1.32
NEDD9-208ENST00000504387 CD8AP01732 235 aa6.83□□□□□ -1.32
NEDD9-208ENST00000504387 IGHV2-70P01814 119 aa6.83□□□□□ -1.32
NEDD9-208ENST00000504387 CEACAM5P06731 702 aa6.83□□□□□ -1.32
NEDD9-208ENST00000504387 QDPRP09417 244 aa6.83□□□□□ -1.32
NEDD9-208ENST00000504387 FBP1P09467 338 aa6.83□□□□□ -1.32
NEDD9-208ENST00000504387 MAOAP21397 527 aa6.83□□□□□ -1.32
NEDD9-208ENST00000504387 ARF3P61204 181 aaPredicted RBP6.83□□□□□ -1.32
NEDD9-208ENST00000504387 DCDP81605 110 aaKnown RBP6.83□□□□□ -1.32
NEDD9-208ENST00000504387 ARFRP1Q13795 201 aa6.83□□□□□ -1.32
NEDD9-208ENST00000504387 ZNHIT3Q15649 155 aaPredicted RBP6.83□□□□□ -1.32
NEDD9-208ENST00000504387 ZNF674Q2M3X9 581 aa6.83□□□□□ -1.32
NEDD9-208ENST00000504387 MIDNQ504T8 468 aa6.83□□□□□ -1.32
NEDD9-208ENST00000504387 VWA2Q5GFL6 755 aa6.83□□□□□ -1.32
NEDD9-208ENST00000504387 PYY3Q5JQD4 70 aa6.83□□□□□ -1.32
NEDD9-208ENST00000504387 ZNF529Q6P280 563 aa6.83□□□□□ -1.32
NEDD9-208ENST00000504387 P4HA3Q7Z4N8 544 aa6.83□□□□□ -1.32
NEDD9-208ENST00000504387 SGK3Q96BR1 496 aa6.83□□□□□ -1.32
NEDD9-208ENST00000504387 VWCEQ96DN2 955 aa6.83□□□□□ -1.32
NEDD9-208ENST00000504387 MARS2Q96GW9 593 aaKnown RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms