RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 MVDP53602 400 aa10.09□□□□□ -0.79
LSM6-204ENST00000504181 CDH12P55289 794 aa10.09□□□□□ -0.79
LSM6-204ENST00000504181 PCBD1P61457 104 aa10.09□□□□□ -0.79
LSM6-204ENST00000504181 GNG11P61952 73 aa10.09□□□□□ -0.79
LSM6-204ENST00000504181 ELF3P78545 371 aaPredicted RBP10.09□□□□□ -0.79
LSM6-204ENST00000504181 ZNF74Q16587 644 aa10.09□□□□□ -0.79
LSM6-204ENST00000504181 AANATQ16613 207 aa10.09□□□□□ -0.79
LSM6-204ENST00000504181 FBXW12Q6X9E4 464 aa10.09□□□□□ -0.79
LSM6-204ENST00000504181 ETV3LQ6ZN32 361 aa10.09□□□□□ -0.79
LSM6-204ENST00000504181 FAM90A1Q86YD7 464 aa10.09□□□□□ -0.79
LSM6-204ENST00000504181 MZB1Q8WU39 189 aa10.09□□□□□ -0.79
LSM6-204ENST00000504181 PPP1R36Q96LQ0 422 aa10.09□□□□□ -0.79
LSM6-204ENST00000504181 TMEM27Q9HBJ8 222 aa10.09□□□□□ -0.79
LSM6-204ENST00000504181 TRIM36Q9NQ86 728 aa10.09□□□□□ -0.79
LSM6-204ENST00000504181 CAPN7Q9Y6W3 813 aa10.09□□□□□ -0.79
LSM6-204ENST00000504181 KIAA1109Q2LD37 5005 aa10.09□□□□□ -0.79
LSM6-204ENST00000504181 A0A1W2PRG6 482 aa10.08□□□□□ -0.8
LSM6-204ENST00000504181 IQCF6A8MYZ5 107 aa10.08□□□□□ -0.8
LSM6-204ENST00000504181 CENPBD1B2RD01 187 aa10.08□□□□□ -0.8
LSM6-204ENST00000504181 BLOC1S5-TXNDC5H3BN57 136 aa10.08□□□□□ -0.8
LSM6-204ENST00000504181 TRIM13O60858 407 aa10.08□□□□□ -0.8
LSM6-204ENST00000504181 KRT75O95678 551 aa10.08□□□□□ -0.8
LSM6-204ENST00000504181 COX5BP10606 129 aa10.08□□□□□ -0.8
LSM6-204ENST00000504181 UMPSP11172 480 aa10.08□□□□□ -0.8
LSM6-204ENST00000504181 CD200P41217 278 aa10.08□□□□□ -0.8
LSM6-204ENST00000504181 ENDOGQ14249 297 aaKnown RBP10.08□□□□□ -0.8
LSM6-204ENST00000504181 PLA1AQ53H76 456 aa10.08□□□□□ -0.8
LSM6-204ENST00000504181 NCR3LG1Q68D85 454 aa10.08□□□□□ -0.8
LSM6-204ENST00000504181 KCTD18Q6PI47 426 aaPredicted RBP10.08□□□□□ -0.8
LSM6-204ENST00000504181 SLC25A47Q6Q0C1 308 aa10.08□□□□□ -0.8
LSM6-204ENST00000504181 NANOGNBQ7Z5D8 188 aa10.08□□□□□ -0.8
LSM6-204ENST00000504181 SLC30A8Q8IWU4 369 aa10.08□□□□□ -0.8
LSM6-204ENST00000504181 CELF2-AS1Q8N7Q2 184 aa10.08□□□□□ -0.8
LSM6-204ENST00000504181 DDB2Q92466 427 aa10.08□□□□□ -0.8
LSM6-204ENST00000504181 NMD3Q96D46 503 aaKnown RBP10.08□□□□□ -0.8
LSM6-204ENST00000504181 ZNF649Q9BS31 505 aa10.08□□□□□ -0.8
LSM6-204ENST00000504181 MYLK2Q9H1R3 596 aa10.08□□□□□ -0.8
LSM6-204ENST00000504181 SMURF2Q9HAU4 748 aa10.08□□□□□ -0.8
LSM6-204ENST00000504181 SORL1Q92673 2214 aa10.08□□□□□ -0.8
LSM6-204ENST00000504181 A0A1W2PPL8 197 aa10.07□□□□□ -0.8
LSM6-204ENST00000504181 TMEM247A6NEH6 219 aa10.07□□□□□ -0.8
LSM6-204ENST00000504181 E9PBE3 544 aa10.07□□□□□ -0.8
LSM6-204ENST00000504181 F2RL2O00254 374 aa10.07□□□□□ -0.8
LSM6-204ENST00000504181 KPNA4O00629 521 aaPredicted RBP10.07□□□□□ -0.8
LSM6-204ENST00000504181 IGF2P01344 180 aa10.07□□□□□ -0.8
LSM6-204ENST00000504181 HIST1H2ABP04908 130 aa10.07□□□□□ -0.8
LSM6-204ENST00000504181 SERPINE1P05121 402 aa10.07□□□□□ -0.8
LSM6-204ENST00000504181 SERPINB5P36952 375 aa10.07□□□□□ -0.8
LSM6-204ENST00000504181 UGT2B15P54855 530 aa10.07□□□□□ -0.8
LSM6-204ENST00000504181 DPY19L1Q2PZI1 675 aa10.07□□□□□ -0.8
LSM6-204ENST00000504181 BEND6Q5SZJ8 279 aaPredicted RBP10.07□□□□□ -0.8
LSM6-204ENST00000504181 HIST3H2AQ7L7L0 130 aa10.07□□□□□ -0.8
LSM6-204ENST00000504181 CENPVQ7Z7K6 275 aaPredicted RBP10.07□□□□□ -0.8
LSM6-204ENST00000504181 H1FXQ92522 213 aaKnown RBP10.07□□□□□ -0.8
LSM6-204ENST00000504181 HDAC2Q92769 488 aaKnown RBP10.07□□□□□ -0.8
LSM6-204ENST00000504181 HIST1H2ACQ93077 130 aa10.07□□□□□ -0.8
LSM6-204ENST00000504181 ISOC1Q96CN7 298 aa10.07□□□□□ -0.8
LSM6-204ENST00000504181 CPPED1Q9BRF8 314 aaPredicted RBP10.07□□□□□ -0.8
LSM6-204ENST00000504181 WDR76Q9H967 626 aa10.07□□□□□ -0.8
LSM6-204ENST00000504181 KAAG1Q9UBP8 84 aa10.07□□□□□ -0.8
LSM6-204ENST00000504181 ANGPT4Q9Y264 503 aa10.07□□□□□ -0.8
LSM6-204ENST00000504181 A0A1B0GWJ7 208 aa10.06□□□□□ -0.8
LSM6-204ENST00000504181 FMO6PO60774 539 aa10.06□□□□□ -0.8
LSM6-204ENST00000504181 ALDOBP05062 364 aa10.06□□□□□ -0.8
LSM6-204ENST00000504181 PRKAR1BP31321 381 aa10.06□□□□□ -0.8
LSM6-204ENST00000504181 RAB13P51153 203 aa10.06□□□□□ -0.8
LSM6-204ENST00000504181 DAP3P51398 398 aaKnown RBP10.06□□□□□ -0.8
LSM6-204ENST00000504181 CLNS1AP54105 237 aaKnown RBP10.06□□□□□ -0.8
LSM6-204ENST00000504181 NME5P56597 212 aa10.06□□□□□ -0.8
LSM6-204ENST00000504181 RGS8P57771 180 aaPredicted RBP10.06□□□□□ -0.8
LSM6-204ENST00000504181 BLCAPP62952 87 aa10.06□□□□□ -0.8
LSM6-204ENST00000504181 ECH1Q13011 328 aa10.06□□□□□ -0.8
LSM6-204ENST00000504181 HCP5Q6MZN7 132 aa10.06□□□□□ -0.8
LSM6-204ENST00000504181 LHFPL2Q6ZUX7 228 aa10.06□□□□□ -0.8
LSM6-204ENST00000504181 HDDC2Q7Z4H3 204 aa10.06□□□□□ -0.8
LSM6-204ENST00000504181 FAM216BQ8N7L0 139 aa10.06□□□□□ -0.8
LSM6-204ENST00000504181 RASD2Q96D21 266 aa10.06□□□□□ -0.8
LSM6-204ENST00000504181 CCL13Q99616 98 aa10.06□□□□□ -0.8
LSM6-204ENST00000504181 WFDC6Q9BQY6 131 aa10.06□□□□□ -0.8
LSM6-204ENST00000504181 SLCO1B3Q9NPD5 702 aa10.06□□□□□ -0.8
LSM6-204ENST00000504181 PSMC3IPQ9P2W1 217 aaPredicted RBP10.06□□□□□ -0.8
LSM6-204ENST00000504181 ZNF229Q9UJW7 825 aa10.06□□□□□ -0.8
LSM6-204ENST00000504181 PRPF19Q9UMS4 504 aaKnown RBP10.06□□□□□ -0.8
LSM6-204ENST00000504181 TCF19Q9Y242 345 aa10.06□□□□□ -0.8
LSM6-204ENST00000504181 SF3B6Q9Y3B4 125 aaKnown RBP10.06□□□□□ -0.8
LSM6-204ENST00000504181 C12orf71A8MTZ7 269 aa10.05□□□□□ -0.8
LSM6-204ENST00000504181 SGCEO43556 437 aa10.05□□□□□ -0.8
LSM6-204ENST00000504181 TPST1O60507 370 aa10.05□□□□□ -0.8
LSM6-204ENST00000504181 TPST2O60704 377 aa10.05□□□□□ -0.8
LSM6-204ENST00000504181 SLC22A3O75751 556 aa10.05□□□□□ -0.8
LSM6-204ENST00000504181 SCG5P05408 212 aa10.05□□□□□ -0.8
LSM6-204ENST00000504181 DBHP09172 617 aa10.05□□□□□ -0.8
LSM6-204ENST00000504181 ASAH2BP0C7U1 165 aa10.05□□□□□ -0.8
LSM6-204ENST00000504181 MSR1P21757 451 aa10.05□□□□□ -0.8
LSM6-204ENST00000504181 ECHS1P30084 290 aa10.05□□□□□ -0.8
LSM6-204ENST00000504181 GUCA1AP43080 201 aaPredicted RBP10.05□□□□□ -0.8
LSM6-204ENST00000504181 CCT5P48643 541 aa10.05□□□□□ -0.8
LSM6-204ENST00000504181 THBS3P49746 956 aa10.05□□□□□ -0.8
LSM6-204ENST00000504181 IL5RAQ01344 420 aa10.05□□□□□ -0.8
LSM6-204ENST00000504181 RPL18Q07020 188 aaKnown RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms