RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 ADAM20O43506 726 aa12.83□□□□□ -0.36
HDAC6-236ENST00000498808 OR10H3O60404 316 aa12.83□□□□□ -0.36
HDAC6-236ENST00000498808 FPR3P25089 353 aa12.83□□□□□ -0.36
HDAC6-236ENST00000498808 PRSS12P56730 875 aa12.83□□□□□ -0.36
HDAC6-236ENST00000498808 WDR4P57081 412 aaKnown RBP12.83□□□□□ -0.36
HDAC6-236ENST00000498808 CTXN1P60606 82 aa12.83□□□□□ -0.36
HDAC6-236ENST00000498808 MPPED2Q15777 294 aa12.83□□□□□ -0.36
HDAC6-236ENST00000498808 VMO1Q7Z5L0 202 aa12.83□□□□□ -0.36
HDAC6-236ENST00000498808 LRRC75AQ8NAA5 344 aa12.83□□□□□ -0.36
HDAC6-236ENST00000498808 OR11L1Q8NGX0 322 aa12.83□□□□□ -0.36
HDAC6-236ENST00000498808 LRRC8CQ8TDW0 803 aa12.83□□□□□ -0.36
HDAC6-236ENST00000498808 ERGIC1Q969X5 290 aa12.83□□□□□ -0.36
HDAC6-236ENST00000498808 PPA2Q9H2U2 334 aa12.83□□□□□ -0.36
HDAC6-236ENST00000498808 WDR76Q9H967 626 aa12.83□□□□□ -0.36
HDAC6-236ENST00000498808 ELOVL7A1L3X0 281 aa12.82□□□□□ -0.36
HDAC6-236ENST00000498808 ANKRD61A6NGH8 418 aa12.82□□□□□ -0.36
HDAC6-236ENST00000498808 RNASEK-C17orf49H0YIS7 233 aa12.82□□□□□ -0.36
HDAC6-236ENST00000498808 LGALS8O00214 317 aa12.82□□□□□ -0.36
HDAC6-236ENST00000498808 XPNPEP2O43895 674 aa12.82□□□□□ -0.36
HDAC6-236ENST00000498808 RGS6P49758 472 aa12.82□□□□□ -0.36
HDAC6-236ENST00000498808 CRYBA2P53672 197 aa12.82□□□□□ -0.36
HDAC6-236ENST00000498808 VSNL1P62760 191 aa12.82□□□□□ -0.36
HDAC6-236ENST00000498808 AQP6Q13520 282 aa12.82□□□□□ -0.36
HDAC6-236ENST00000498808 SELPLGQ14242 412 aa12.82□□□□□ -0.36
HDAC6-236ENST00000498808 CYP51A1Q16850 503 aa12.82□□□□□ -0.36
HDAC6-236ENST00000498808 CCDC92Q53HC0 331 aaPredicted RBP12.82□□□□□ -0.36
HDAC6-236ENST00000498808 DLEU7Q6UYE1 221 aa12.82□□□□□ -0.36
HDAC6-236ENST00000498808 C1orf122Q6ZSJ8 110 aa12.82□□□□□ -0.36
HDAC6-236ENST00000498808 BTN2A1Q7KYR7 527 aa12.82□□□□□ -0.36
HDAC6-236ENST00000498808 LYG1Q8N1E2 194 aa12.82□□□□□ -0.36
HDAC6-236ENST00000498808 CELF2-AS1Q8N7Q2 184 aa12.82□□□□□ -0.36
HDAC6-236ENST00000498808 ANKRD42Q8N9B4 389 aa12.82□□□□□ -0.36
HDAC6-236ENST00000498808 OR5L1Q8NGL2 311 aa12.82□□□□□ -0.36
HDAC6-236ENST00000498808 OR1F12Q8NHA8 337 aa12.82□□□□□ -0.36
HDAC6-236ENST00000498808 ECSITQ9BQ95 431 aa12.82□□□□□ -0.36
HDAC6-236ENST00000498808 TMEM100Q9NV29 134 aa12.82□□□□□ -0.36
HDAC6-236ENST00000498808 CCDC167Q9P0B6 97 aa12.82□□□□□ -0.36
HDAC6-236ENST00000498808 LOC100653049A0A140TA62 436 aa12.81□□□□□ -0.36
HDAC6-236ENST00000498808 A6NIZ1 184 aa12.81□□□□□ -0.36
HDAC6-236ENST00000498808 KRT34O76011 436 aa12.81□□□□□ -0.36
HDAC6-236ENST00000498808 VIMP08670 466 aaKnown RBP12.81□□□□□ -0.36
HDAC6-236ENST00000498808 TNFRSF1BP20333 461 aa12.81□□□□□ -0.36
HDAC6-236ENST00000498808 CD200P41217 278 aa12.81□□□□□ -0.36
HDAC6-236ENST00000498808 RAP1BP61224 184 aa12.81□□□□□ -0.36
HDAC6-236ENST00000498808 STX1BP61266 288 aa12.81□□□□□ -0.36
HDAC6-236ENST00000498808 RAP1AP62834 184 aa12.81□□□□□ -0.36
HDAC6-236ENST00000498808 PRB3Q04118 309 aaPredicted RBP12.81□□□□□ -0.36
HDAC6-236ENST00000498808 KCNJ8Q15842 424 aa12.81□□□□□ -0.36
HDAC6-236ENST00000498808 CDONQ4KMG0 1287 aa12.81□□□□□ -0.36
HDAC6-236ENST00000498808 TNFAIP8L3Q5GJ75 292 aa12.81□□□□□ -0.36
HDAC6-236ENST00000498808 INTS11Q5TA45 600 aaKnown RBP12.81□□□□□ -0.36
HDAC6-236ENST00000498808 FOXB2Q5VYV0 432 aa12.81□□□□□ -0.36
HDAC6-236ENST00000498808 PATL1Q86TB9 770 aaKnown RBP12.81□□□□□ -0.36
HDAC6-236ENST00000498808 KLHDC1Q8N7A1 406 aa12.81□□□□□ -0.36
HDAC6-236ENST00000498808 PPP1R35Q8TAP8 253 aa12.81□□□□□ -0.36
HDAC6-236ENST00000498808 AENQ8WTP8 325 aaKnown RBP12.81□□□□□ -0.36
HDAC6-236ENST00000498808 APOBEC3DQ96AK3 386 aaPredicted RBP12.81□□□□□ -0.36
HDAC6-236ENST00000498808 RNF7Q9UBF6 113 aa12.81□□□□□ -0.36
HDAC6-236ENST00000498808 RIMS3Q9UJD0 308 aa12.81□□□□□ -0.36
HDAC6-236ENST00000498808 CAB39Q9Y376 341 aaPredicted RBP12.81□□□□□ -0.36
HDAC6-236ENST00000498808 MED31Q9Y3C7 131 aa12.81□□□□□ -0.36
HDAC6-236ENST00000498808 KPTNQ9Y664 436 aa12.81□□□□□ -0.36
HDAC6-236ENST00000498808 A0A1B0GVI7 797 aa12.8□□□□□ -0.36
HDAC6-236ENST00000498808 RER1O15258 196 aa12.8□□□□□ -0.36
HDAC6-236ENST00000498808 SHOX2O60902 331 aaPredicted RBP12.8□□□□□ -0.36
HDAC6-236ENST00000498808 OR5F1O95221 314 aa12.8□□□□□ -0.36
HDAC6-236ENST00000498808 MPIG6BO95866 241 aa12.8□□□□□ -0.36
HDAC6-236ENST00000498808 TAS2R41P59536 307 aa12.8□□□□□ -0.36
HDAC6-236ENST00000498808 PIN1Q13526 163 aaPredicted RBP12.8□□□□□ -0.36
HDAC6-236ENST00000498808 FHL1Q13642 323 aa12.8□□□□□ -0.36
HDAC6-236ENST00000498808 METAP1DQ6UB28 335 aaPredicted RBP12.8□□□□□ -0.36
HDAC6-236ENST00000498808 CCBE1Q6UXH8 406 aaPredicted RBP12.8□□□□□ -0.36
HDAC6-236ENST00000498808 FGFRL1Q8N441 504 aa12.8□□□□□ -0.36
HDAC6-236ENST00000498808 BOLLQ8N9W6 283 aaKnown RBP12.8□□□□□ -0.36
HDAC6-236ENST00000498808 OR5R1Q8NH85 324 aa12.8□□□□□ -0.36
HDAC6-236ENST00000498808 NPRL2Q8WTW4 380 aa12.8□□□□□ -0.36
HDAC6-236ENST00000498808 ZBTB9Q96C00 473 aa12.8□□□□□ -0.36
HDAC6-236ENST00000498808 CNTD2Q9H8S5 307 aa12.8□□□□□ -0.36
HDAC6-236ENST00000498808 SIRT7Q9NRC8 400 aa12.8□□□□□ -0.36
HDAC6-236ENST00000498808 ATPIF1Q9UII2 106 aa12.8□□□□□ -0.36
HDAC6-236ENST00000498808 RPUSD1Q9UJJ7 312 aaKnown RBP12.8□□□□□ -0.36
HDAC6-236ENST00000498808 K7EIL1 84 aa12.79□□□□□ -0.36
HDAC6-236ENST00000498808 DVL1O14640 695 aa12.79□□□□□ -0.36
HDAC6-236ENST00000498808 GYPAP02724 150 aa12.79□□□□□ -0.36
HDAC6-236ENST00000498808 CTLA4P16410 223 aa12.79□□□□□ -0.36
HDAC6-236ENST00000498808 KIR2DS4P43632 304 aa12.79□□□□□ -0.36
HDAC6-236ENST00000498808 DLX1P56177 255 aa12.79□□□□□ -0.36
HDAC6-236ENST00000498808 MTPNP58546 118 aa12.79□□□□□ -0.36
HDAC6-236ENST00000498808 OR8B8Q15620 311 aa12.79□□□□□ -0.36
HDAC6-236ENST00000498808 BEND6Q5SZJ8 279 aaPredicted RBP12.79□□□□□ -0.36
HDAC6-236ENST00000498808 C11orf88Q6PI97 169 aa12.79□□□□□ -0.36
HDAC6-236ENST00000498808 EPGNQ6UW88 154 aa12.79□□□□□ -0.36
HDAC6-236ENST00000498808 MICU2Q8IYU8 434 aa12.79□□□□□ -0.36
HDAC6-236ENST00000498808 SLC26A7Q8TE54 656 aa12.79□□□□□ -0.36
HDAC6-236ENST00000498808 MMP28Q9H239 520 aa12.79□□□□□ -0.36
HDAC6-236ENST00000498808 SH3GLB1Q9Y371 365 aa12.79□□□□□ -0.36
HDAC6-236ENST00000498808 TRAV27A0A087WT01 109 aa12.78□□□□□ -0.36
HDAC6-236ENST00000498808 TEX13CA0A0J9YWL9 993 aa12.78□□□□□ -0.36
HDAC6-236ENST00000498808 A0A1W2PRD5 423 aa12.78□□□□□ -0.36
HDAC6-236ENST00000498808 A0A1W2PRF3 423 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms