RNA–Protein interactions for RNA: ENST00000498160.5

CTDSP1-215, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-215ENST00000498160 OPA3Q9H6K4 179 aa15.22■□□□□ 0.03
CTDSP1-215ENST00000498160 SLCO1C1Q9NYB5 712 aa15.22■□□□□ 0.03
CTDSP1-215ENST00000498160 KLHDC2Q9Y2U9 406 aa15.22■□□□□ 0.03
CTDSP1-215ENST00000498160 SNX5Q9Y5X3 404 aa15.22■□□□□ 0.03
CTDSP1-215ENST00000498160 FLNCQ14315 2725 aa15.22■□□□□ 0.03
CTDSP1-215ENST00000498160 LOC100509620A0A075B734 347 aa15.21■□□□□ 0.03
CTDSP1-215ENST00000498160 DPRXA6NFQ7 191 aa15.21■□□□□ 0.03
CTDSP1-215ENST00000498160 A6NNC1 897 aa15.21■□□□□ 0.03
CTDSP1-215ENST00000498160 DEFB108AA8MXU0 73 aa15.21■□□□□ 0.03
CTDSP1-215ENST00000498160 F5H5K5 113 aa15.21■□□□□ 0.03
CTDSP1-215ENST00000498160 ABCD4O14678 606 aa15.21■□□□□ 0.03
CTDSP1-215ENST00000498160 CELA3BP08861 270 aa15.21■□□□□ 0.03
CTDSP1-215ENST00000498160 ACSM4P0C7M7 580 aa15.21■□□□□ 0.03
CTDSP1-215ENST00000498160 LIMS3P0CW19 117 aa15.21■□□□□ 0.03
CTDSP1-215ENST00000498160 LIMS4P0CW20 117 aa15.21■□□□□ 0.03
CTDSP1-215ENST00000498160 CCNOP22674 350 aa15.21■□□□□ 0.03
CTDSP1-215ENST00000498160 CFL1P23528 166 aaKnown RBP15.21■□□□□ 0.03
CTDSP1-215ENST00000498160 CX3CR1P49238 355 aa15.21■□□□□ 0.03
CTDSP1-215ENST00000498160 MMP16P51512 607 aa15.21■□□□□ 0.03
CTDSP1-215ENST00000498160 GBX2P52951 348 aaPredicted RBP15.21■□□□□ 0.03
CTDSP1-215ENST00000498160 TAS2R43P59537 309 aa15.21■□□□□ 0.03
CTDSP1-215ENST00000498160 ZNF684Q5T5D7 378 aa15.21■□□□□ 0.03
CTDSP1-215ENST00000498160 SLC22A25Q6T423 547 aa15.21■□□□□ 0.03
CTDSP1-215ENST00000498160 LHFPL3Q86UP9 236 aa15.21■□□□□ 0.03
CTDSP1-215ENST00000498160 PIK3IP1Q96FE7 263 aa15.21■□□□□ 0.03
CTDSP1-215ENST00000498160 AMELYQ99218 206 aa15.21■□□□□ 0.03
CTDSP1-215ENST00000498160 C1QTNF5Q9BXJ0 243 aa15.21■□□□□ 0.03
CTDSP1-215ENST00000498160 RGCCQ9H4X1 137 aa15.21■□□□□ 0.03
CTDSP1-215ENST00000498160 GNG8Q9UK08 70 aa15.21■□□□□ 0.03
CTDSP1-215ENST00000498160 GRIP1Q9Y3R0 1128 aa15.21■□□□□ 0.03
CTDSP1-215ENST00000498160 NR4A1P22736 598 aa15.2■□□□□ 0.02
CTDSP1-215ENST00000498160 MVKQ03426 396 aa15.2■□□□□ 0.02
CTDSP1-215ENST00000498160 MALLQ13021 153 aa15.2■□□□□ 0.02
CTDSP1-215ENST00000498160 SNTB1Q13884 538 aaKnown RBP15.2■□□□□ 0.02
CTDSP1-215ENST00000498160 CCDC58Q4VC31 144 aa15.2■□□□□ 0.02
CTDSP1-215ENST00000498160 SPATC1Q76KD6 591 aa15.2■□□□□ 0.02
CTDSP1-215ENST00000498160 PIAS4Q8N2W9 510 aaPredicted RBP15.2■□□□□ 0.02
CTDSP1-215ENST00000498160 SMAP2Q8WU79 429 aaPredicted RBP15.2■□□□□ 0.02
CTDSP1-215ENST00000498160 C14orf79Q96F83 325 aa15.2■□□□□ 0.02
CTDSP1-215ENST00000498160 SIGLEC11Q96RL6 698 aa15.2■□□□□ 0.02
CTDSP1-215ENST00000498160 TMEM204Q9BSN7 226 aa15.2■□□□□ 0.02
CTDSP1-215ENST00000498160 ZNF442Q9H7R0 627 aa15.2■□□□□ 0.02
CTDSP1-215ENST00000498160 TRIM36Q9NQ86 728 aa15.2■□□□□ 0.02
CTDSP1-215ENST00000498160 PLEKHB1Q9UF11 243 aaPredicted RBP15.2■□□□□ 0.02
CTDSP1-215ENST00000498160 MRM2Q9UI43 246 aaKnown RBP15.2■□□□□ 0.02
CTDSP1-215ENST00000498160 FBXO9Q9UK97 447 aaPredicted RBP15.2■□□□□ 0.02
CTDSP1-215ENST00000498160 POU2F3Q9UKI9 436 aa15.2■□□□□ 0.02
CTDSP1-215ENST00000498160 R4GMQ9 66 aa15.2■□□□□ 0.02
CTDSP1-215ENST00000498160 LRRK2Q5S007 2527 aa15.19■□□□□ 0.02
CTDSP1-215ENST00000498160 TMEM269A0A1B0GVZ9 245 aa15.19■□□□□ 0.02
CTDSP1-215ENST00000498160 TRIM64A6NGJ6 449 aa15.19■□□□□ 0.02
CTDSP1-215ENST00000498160 LOC110117498-PIK3R3F6TDL0 507 aa15.19■□□□□ 0.02
CTDSP1-215ENST00000498160 XRCC2O43543 280 aa15.19■□□□□ 0.02
CTDSP1-215ENST00000498160 C21orf33P30042 268 aaPredicted RBP15.19■□□□□ 0.02
CTDSP1-215ENST00000498160 GLRXP35754 106 aa15.19■□□□□ 0.02
CTDSP1-215ENST00000498160 ETV1P50549 477 aa15.19■□□□□ 0.02
CTDSP1-215ENST00000498160 PRKXP51817 358 aa15.19■□□□□ 0.02
CTDSP1-215ENST00000498160 UCP2P55851 309 aa15.19■□□□□ 0.02
CTDSP1-215ENST00000498160 WNT4P56705 351 aa15.19■□□□□ 0.02
CTDSP1-215ENST00000498160 BDH1Q02338 343 aa15.19■□□□□ 0.02
CTDSP1-215ENST00000498160 TBCEQ15813 527 aaPredicted RBP15.19■□□□□ 0.02
CTDSP1-215ENST00000498160 LIPNQ5VXI9 398 aa15.19■□□□□ 0.02
CTDSP1-215ENST00000498160 ADAM5Q6NVV9 412 aa15.19■□□□□ 0.02
CTDSP1-215ENST00000498160 FDX2Q6P4F2 183 aa15.19■□□□□ 0.02
CTDSP1-215ENST00000498160 COLCA1Q6ZS62 124 aa15.19■□□□□ 0.02
CTDSP1-215ENST00000498160 SSX6Q7RTT6 188 aa15.19■□□□□ 0.02
CTDSP1-215ENST00000498160 CCDC54Q8NEL0 328 aa15.19■□□□□ 0.02
CTDSP1-215ENST00000498160 FCGR1BQ92637 280 aa15.19■□□□□ 0.02
CTDSP1-215ENST00000498160 C4orf36Q96KX1 117 aa15.19■□□□□ 0.02
CTDSP1-215ENST00000498160 ZNF649Q9BS31 505 aa15.19■□□□□ 0.02
CTDSP1-215ENST00000498160 RHNO1Q9BSD3 238 aa15.19■□□□□ 0.02
CTDSP1-215ENST00000498160 CCDC90BQ9GZT6 254 aa15.19■□□□□ 0.02
CTDSP1-215ENST00000498160 OR10A2Q9H208 303 aa15.19■□□□□ 0.02
CTDSP1-215ENST00000498160 ZNF696Q9H7X3 374 aa15.19■□□□□ 0.02
CTDSP1-215ENST00000498160 VCX3AQ9NNX9 186 aa15.19■□□□□ 0.02
CTDSP1-215ENST00000498160 HELZ2Q9BYK8 2649 aaKnown RBP15.19■□□□□ 0.02
CTDSP1-215ENST00000498160 J3QLW9 94 aa15.18■□□□□ 0.02
CTDSP1-215ENST00000498160 SMPD2O60906 423 aa15.18■□□□□ 0.02
CTDSP1-215ENST00000498160 LCATP04180 440 aa15.18■□□□□ 0.02
CTDSP1-215ENST00000498160 ANXA2P07355 339 aaKnown RBP15.18■□□□□ 0.02
CTDSP1-215ENST00000498160 HTR1AP08908 422 aa15.18■□□□□ 0.02
CTDSP1-215ENST00000498160 ZNF19P17023 458 aa15.18■□□□□ 0.02
CTDSP1-215ENST00000498160 CALCRP30988 508 aa15.18■□□□□ 0.02
CTDSP1-215ENST00000498160 TGM4P49221 684 aa15.18■□□□□ 0.02
CTDSP1-215ENST00000498160 CCR9P51686 369 aa15.18■□□□□ 0.02
CTDSP1-215ENST00000498160 OR12D2P58182 307 aa15.18■□□□□ 0.02
CTDSP1-215ENST00000498160 SELENOVP59797 346 aa15.18■□□□□ 0.02
CTDSP1-215ENST00000498160 IRF3Q14653 427 aa15.18■□□□□ 0.02
CTDSP1-215ENST00000498160 TP53I3Q53FA7 332 aa15.18■□□□□ 0.02
CTDSP1-215ENST00000498160 ZNF773Q6PK81 442 aa15.18■□□□□ 0.02
CTDSP1-215ENST00000498160 MYPOPQ86VE0 399 aaPredicted RBP15.18■□□□□ 0.02
CTDSP1-215ENST00000498160 RFLNBQ8N5W9 214 aa15.18■□□□□ 0.02
CTDSP1-215ENST00000498160 NANOGP1Q8N7R0 232 aa15.18■□□□□ 0.02
CTDSP1-215ENST00000498160 AKAP1Q92667 903 aaKnown RBP eCLIP15.18■□□□□ 0.02
CTDSP1-215ENST00000498160 FAIMQ9NVQ4 179 aa15.18■□□□□ 0.02
CTDSP1-215ENST00000498160 PAK1IP1Q9NWT1 392 aaPredicted RBP15.18■□□□□ 0.02
CTDSP1-215ENST00000498160 ERVK-18Q9QC07 812 aa15.18■□□□□ 0.02
CTDSP1-215ENST00000498160 NUFIP1Q9UHK0 495 aaKnown RBP15.18■□□□□ 0.02
CTDSP1-215ENST00000498160 A0A087WXM4 84 aa15.17■□□□□ 0.02
CTDSP1-215ENST00000498160 FAM221AA4D161 298 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms