RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 COPS3Q9UNS2 423 aa16.66■□□□□ 0.26
HDAC4-212ENST00000495497 USF3Q68DE3 2245 aa16.65■□□□□ 0.26
HDAC4-212ENST00000495497 IGLV3-9A0A075B6K5 115 aa16.65■□□□□ 0.26
HDAC4-212ENST00000495497 A0A1W2PPW3 197 aa16.65■□□□□ 0.26
HDAC4-212ENST00000495497 C5orf63A6NC05 138 aa16.65■□□□□ 0.26
HDAC4-212ENST00000495497 SLC16A6O15403 523 aa16.65■□□□□ 0.26
HDAC4-212ENST00000495497 CLIC3O95833 236 aa16.65■□□□□ 0.26
HDAC4-212ENST00000495497 LCATP04180 440 aa16.65■□□□□ 0.26
HDAC4-212ENST00000495497 GABRB1P18505 474 aa16.65■□□□□ 0.26
HDAC4-212ENST00000495497 GCH1P30793 250 aa16.65■□□□□ 0.26
HDAC4-212ENST00000495497 HTR1FP30939 366 aa16.65■□□□□ 0.26
HDAC4-212ENST00000495497 EVX1P49640 407 aa16.65■□□□□ 0.26
HDAC4-212ENST00000495497 KLF3P57682 345 aaPredicted RBP16.65■□□□□ 0.26
HDAC4-212ENST00000495497 SNRPGP62308 76 aaKnown RBP16.65■□□□□ 0.26
HDAC4-212ENST00000495497 UNQ6126/PRO20091Q6UXV3 157 aa16.65■□□□□ 0.26
HDAC4-212ENST00000495497 RFLNBQ8N5W9 214 aa16.65■□□□□ 0.26
HDAC4-212ENST00000495497 ZNF454Q8N9F8 522 aa16.65■□□□□ 0.26
HDAC4-212ENST00000495497 OR51G2Q8NGK0 314 aa16.65■□□□□ 0.26
HDAC4-212ENST00000495497 CYGBQ8WWM9 190 aa16.65■□□□□ 0.26
HDAC4-212ENST00000495497 GTF3AQ92664 365 aaKnown RBP16.65■□□□□ 0.26
HDAC4-212ENST00000495497 SPTSSAQ969W0 71 aa16.65■□□□□ 0.26
HDAC4-212ENST00000495497 RDH12Q96NR8 316 aa16.65■□□□□ 0.26
HDAC4-212ENST00000495497 KCNJ15Q99712 375 aa16.65■□□□□ 0.26
HDAC4-212ENST00000495497 C1QTNF5Q9BXJ0 243 aa16.65■□□□□ 0.26
HDAC4-212ENST00000495497 YIPF3Q9GZM5 350 aa16.65■□□□□ 0.26
HDAC4-212ENST00000495497 DYNLRB1Q9NP97 96 aa16.65■□□□□ 0.26
HDAC4-212ENST00000495497 WARS2Q9UGM6 360 aaKnown RBP16.65■□□□□ 0.26
HDAC4-212ENST00000495497 N6AMT1Q9Y5N5 214 aa16.65■□□□□ 0.26
HDAC4-212ENST00000495497 PRR32B1ATL7 298 aa16.64■□□□□ 0.25
HDAC4-212ENST00000495497 H7C417 338 aa16.64■□□□□ 0.25
HDAC4-212ENST00000495497 PSMD9O00233 223 aa16.64■□□□□ 0.25
HDAC4-212ENST00000495497 LY6HO94772 140 aa16.64■□□□□ 0.25
HDAC4-212ENST00000495497 H2BFMP0C1H6 154 aa16.64■□□□□ 0.25
HDAC4-212ENST00000495497 SLC2A1P11166 492 aa16.64■□□□□ 0.25
HDAC4-212ENST00000495497 BMP4P12644 408 aa16.64■□□□□ 0.25
HDAC4-212ENST00000495497 ALOX5APP20292 161 aa16.64■□□□□ 0.25
HDAC4-212ENST00000495497 OTX1P32242 354 aaPredicted RBP16.64■□□□□ 0.25
HDAC4-212ENST00000495497 OPRL1P41146 370 aa16.64■□□□□ 0.25
HDAC4-212ENST00000495497 SLC6A9P48067 706 aa16.64■□□□□ 0.25
HDAC4-212ENST00000495497 RGS6P49758 472 aa16.64■□□□□ 0.25
HDAC4-212ENST00000495497 HLXQ14774 488 aaPredicted RBP16.64■□□□□ 0.25
HDAC4-212ENST00000495497 Q5PR19 223 aa16.64■□□□□ 0.25
HDAC4-212ENST00000495497 MBNL2Q5VZF2 373 aaKnown RBP16.64■□□□□ 0.25
HDAC4-212ENST00000495497 LRRN1Q6UXK5 716 aa16.64■□□□□ 0.25
HDAC4-212ENST00000495497 SLC35F2Q8IXU6 374 aa16.64■□□□□ 0.25
HDAC4-212ENST00000495497 ZNF283Q8N7M2 679 aa16.64■□□□□ 0.25
HDAC4-212ENST00000495497 APOBEC3DQ96AK3 386 aaPredicted RBP16.64■□□□□ 0.25
HDAC4-212ENST00000495497 CMBLQ96DG6 245 aa16.64■□□□□ 0.25
HDAC4-212ENST00000495497 SORCS2Q96PQ0 1159 aa16.64■□□□□ 0.25
HDAC4-212ENST00000495497 TPK1Q9H3S4 243 aa16.64■□□□□ 0.25
HDAC4-212ENST00000495497 C8orf4Q9NR00 106 aa16.64■□□□□ 0.25
HDAC4-212ENST00000495497 HAO2Q9NYQ3 351 aa16.64■□□□□ 0.25
HDAC4-212ENST00000495497 CCDC168Q8NDH2 2452 aa16.63■□□□□ 0.25
HDAC4-212ENST00000495497 PRRC2AP48634 2157 aaKnown RBP16.63■□□□□ 0.25
HDAC4-212ENST00000495497 IGHV3-13P01766 116 aa16.63■□□□□ 0.25
HDAC4-212ENST00000495497 SBK2P0C263 348 aa16.63■□□□□ 0.25
HDAC4-212ENST00000495497 NAT2P11245 290 aa16.63■□□□□ 0.25
HDAC4-212ENST00000495497 HSD11B1P28845 292 aa16.63■□□□□ 0.25
HDAC4-212ENST00000495497 CX3CR1P49238 355 aa16.63■□□□□ 0.25
HDAC4-212ENST00000495497 PPOXP50336 477 aa16.63■□□□□ 0.25
HDAC4-212ENST00000495497 NUDT6P53370 316 aa16.63■□□□□ 0.25
HDAC4-212ENST00000495497 PRSS12P56730 875 aa16.63■□□□□ 0.25
HDAC4-212ENST00000495497 SELENOVP59797 346 aa16.63■□□□□ 0.25
HDAC4-212ENST00000495497 GRB2P62993 217 aaKnown RBP16.63■□□□□ 0.25
HDAC4-212ENST00000495497 PSG7Q13046 419 aa16.63■□□□□ 0.25
HDAC4-212ENST00000495497 OCLNQ16625 522 aa16.63■□□□□ 0.25
HDAC4-212ENST00000495497 NKPD1Q17RQ9 610 aa16.63■□□□□ 0.25
HDAC4-212ENST00000495497 SNAI3Q3KNW1 292 aa16.63■□□□□ 0.25
HDAC4-212ENST00000495497 SLC25A30Q5SVS4 291 aa16.63■□□□□ 0.25
HDAC4-212ENST00000495497 COLCA1Q6ZS62 124 aa16.63■□□□□ 0.25
HDAC4-212ENST00000495497 WFDC11Q8NEX6 87 aa16.63■□□□□ 0.25
HDAC4-212ENST00000495497 RHOXF1Q8NHV9 184 aa16.63■□□□□ 0.25
HDAC4-212ENST00000495497 TBX5Q99593 518 aa16.63■□□□□ 0.25
HDAC4-212ENST00000495497 SLCO1C1Q9NYB5 712 aa16.63■□□□□ 0.25
HDAC4-212ENST00000495497 M0R233 179 aa16.62■□□□□ 0.25
HDAC4-212ENST00000495497 MAGEB4O15481 346 aaPredicted RBP16.62■□□□□ 0.25
HDAC4-212ENST00000495497 SLC15A1P46059 708 aa16.62■□□□□ 0.25
HDAC4-212ENST00000495497 ADARB1P78563 741 aaKnown RBP16.62■□□□□ 0.25
HDAC4-212ENST00000495497 MEDAGQ5VYS4 303 aa16.62■□□□□ 0.25
HDAC4-212ENST00000495497 C1orf174Q8IYL3 243 aa16.62■□□□□ 0.25
HDAC4-212ENST00000495497 DHRSXQ8N5I4 330 aa16.62■□□□□ 0.25
HDAC4-212ENST00000495497 RFKQ969G6 155 aa16.62■□□□□ 0.25
HDAC4-212ENST00000495497 OTOGQ6ZRI0 2925 aa16.62■□□□□ 0.25
HDAC4-212ENST00000495497 MAST4O15021 2626 aa16.62■□□□□ 0.25
HDAC4-212ENST00000495497 SSX4O60224 188 aa16.61■□□□□ 0.25
HDAC4-212ENST00000495497 CXCR4P61073 352 aa16.61■□□□□ 0.25
HDAC4-212ENST00000495497 IL5RAQ01344 420 aa16.61■□□□□ 0.25
HDAC4-212ENST00000495497 DRAM2Q6UX65 266 aa16.61■□□□□ 0.25
HDAC4-212ENST00000495497 KRT77Q7Z794 578 aa16.61■□□□□ 0.25
HDAC4-212ENST00000495497 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.61■□□□□ 0.25
HDAC4-212ENST00000495497 OR5L1Q8NGL2 311 aa16.61■□□□□ 0.25
HDAC4-212ENST00000495497 OR2AE1Q8NHA4 323 aa16.61■□□□□ 0.25
HDAC4-212ENST00000495497 APH1BQ8WW43 257 aa16.61■□□□□ 0.25
HDAC4-212ENST00000495497 RNFT2Q96EX2 444 aa16.61■□□□□ 0.25
HDAC4-212ENST00000495497 COG8Q96MW5 612 aa16.61■□□□□ 0.25
HDAC4-212ENST00000495497 ADI1Q9BV57 179 aa16.61■□□□□ 0.25
HDAC4-212ENST00000495497 BRD7Q9NPI1 651 aa16.61■□□□□ 0.25
HDAC4-212ENST00000495497 CLN6Q9NWW5 311 aa16.61■□□□□ 0.25
HDAC4-212ENST00000495497 LRP12Q9Y561 859 aa16.61■□□□□ 0.25
HDAC4-212ENST00000495497 ZNF670-ZNF695F2Z2N8 137 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms