RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 ZBTB46Q86UZ6 589 aa9.77□□□□□ -0.85
VTI1A-208ENST00000494728 LRRC28Q86X40 367 aaPredicted RBP9.77□□□□□ -0.85
VTI1A-208ENST00000494728 PGAM4Q8N0Y7 254 aa9.77□□□□□ -0.85
VTI1A-208ENST00000494728 OR9Q2Q8NGE9 314 aa9.77□□□□□ -0.85
VTI1A-208ENST00000494728 OR8D4Q8NGM9 314 aa9.77□□□□□ -0.85
VTI1A-208ENST00000494728 ST7LQ8TDW4 575 aa9.77□□□□□ -0.85
VTI1A-208ENST00000494728 ZFAND2BQ8WV99 257 aa9.77□□□□□ -0.85
VTI1A-208ENST00000494728 PTP4A1Q93096 173 aa9.77□□□□□ -0.85
VTI1A-208ENST00000494728 MAP6Q96JE9 813 aa9.77□□□□□ -0.85
VTI1A-208ENST00000494728 MEGF10Q96KG7 1140 aa9.77□□□□□ -0.85
VTI1A-208ENST00000494728 C1orf147Q96MC9 270 aaPredicted RBP9.77□□□□□ -0.85
VTI1A-208ENST00000494728 ZNF48Q96MX3 618 aaPredicted RBP9.77□□□□□ -0.85
VTI1A-208ENST00000494728 SLC30A2Q9BRI3 323 aa9.77□□□□□ -0.85
VTI1A-208ENST00000494728 BTBD10Q9BSF8 475 aa9.77□□□□□ -0.85
VTI1A-208ENST00000494728 IFT27Q9BW83 186 aa9.77□□□□□ -0.85
VTI1A-208ENST00000494728 C1QTNF5Q9BXJ0 243 aa9.77□□□□□ -0.85
VTI1A-208ENST00000494728 NDEL1Q9GZM8 345 aa9.77□□□□□ -0.85
VTI1A-208ENST00000494728 VNN3Q9NY84 501 aa9.77□□□□□ -0.85
VTI1A-208ENST00000494728 MAGEL2Q9UJ55 1249 aa9.77□□□□□ -0.85
VTI1A-208ENST00000494728 PPP1R3CQ9UQK1 317 aa9.77□□□□□ -0.85
VTI1A-208ENST00000494728 SOX21Q9Y651 276 aaPredicted RBP9.77□□□□□ -0.85
VTI1A-208ENST00000494728 TGP01266 2768 aa9.77□□□□□ -0.85
VTI1A-208ENST00000494728 A0A1B0GWJ7 208 aa9.76□□□□□ -0.85
VTI1A-208ENST00000494728 IQCF6A8MYZ5 107 aa9.76□□□□□ -0.85
VTI1A-208ENST00000494728 J3QW42 95 aa9.76□□□□□ -0.85
VTI1A-208ENST00000494728 HLA-DPB1P04440 258 aa9.76□□□□□ -0.85
VTI1A-208ENST00000494728 FABP3P05413 133 aa9.76□□□□□ -0.85
VTI1A-208ENST00000494728 ACSM4P0C7M7 580 aa9.76□□□□□ -0.85
VTI1A-208ENST00000494728 ZNF12P17014 697 aa9.76□□□□□ -0.85
VTI1A-208ENST00000494728 TNFRSF1AP19438 455 aa9.76□□□□□ -0.85
VTI1A-208ENST00000494728 TUBG1P23258 451 aa9.76□□□□□ -0.85
VTI1A-208ENST00000494728 TNFSF4P23510 183 aa9.76□□□□□ -0.85
VTI1A-208ENST00000494728 CRABP1P29762 137 aa9.76□□□□□ -0.85
VTI1A-208ENST00000494728 SLC6A6P31641 620 aa9.76□□□□□ -0.85
VTI1A-208ENST00000494728 COMPP49747 757 aaPredicted RBP9.76□□□□□ -0.85
VTI1A-208ENST00000494728 PPP1R8Q12972 351 aaKnown RBP9.76□□□□□ -0.85
VTI1A-208ENST00000494728 ZNF154Q13106 437 aa9.76□□□□□ -0.85
VTI1A-208ENST00000494728 CLEC12AQ5QGZ9 265 aa9.76□□□□□ -0.85
VTI1A-208ENST00000494728 SLC35F1Q5T1Q4 408 aa9.76□□□□□ -0.85
VTI1A-208ENST00000494728 C12orf54Q6X4T0 127 aa9.76□□□□□ -0.85
VTI1A-208ENST00000494728 MOGAT3Q86VF5 341 aa9.76□□□□□ -0.85
VTI1A-208ENST00000494728 JAZF1Q86VZ6 243 aa9.76□□□□□ -0.85
VTI1A-208ENST00000494728 BCL6BQ8N143 479 aaPredicted RBP9.76□□□□□ -0.85
VTI1A-208ENST00000494728 SPICQ8N5J4 248 aa9.76□□□□□ -0.85
VTI1A-208ENST00000494728 SIGLECL1Q8N7X8 197 aa9.76□□□□□ -0.85
VTI1A-208ENST00000494728 ATG16L2Q8NAA4 619 aa9.76□□□□□ -0.85
VTI1A-208ENST00000494728 CYB561A3Q8NBI2 242 aa9.76□□□□□ -0.85
VTI1A-208ENST00000494728 GJC3Q8NFK1 279 aa9.76□□□□□ -0.85
VTI1A-208ENST00000494728 OR8G5Q8NG78 346 aa9.76□□□□□ -0.85
VTI1A-208ENST00000494728 NANPQ8TBE9 248 aa9.76□□□□□ -0.85
VTI1A-208ENST00000494728 FAM216AQ8WUB2 273 aa9.76□□□□□ -0.85
VTI1A-208ENST00000494728 APOBEC3DQ96AK3 386 aaPredicted RBP9.76□□□□□ -0.85
VTI1A-208ENST00000494728 DACT3Q96B18 629 aaPredicted RBP9.76□□□□□ -0.85
VTI1A-208ENST00000494728 NSMCE2Q96MF7 247 aa9.76□□□□□ -0.85
VTI1A-208ENST00000494728 DUX5Q96PT3 197 aa9.76□□□□□ -0.85
VTI1A-208ENST00000494728 CDRT15Q96T59 188 aa9.76□□□□□ -0.85
VTI1A-208ENST00000494728 DDOQ99489 341 aa9.76□□□□□ -0.85
VTI1A-208ENST00000494728 TUBG2Q9NRH3 451 aa9.76□□□□□ -0.85
VTI1A-208ENST00000494728 ZNF69Q9UC07 566 aa9.76□□□□□ -0.85
VTI1A-208ENST00000494728 CYB5R1Q9UHQ9 305 aa9.76□□□□□ -0.85
VTI1A-208ENST00000494728 POLR3KQ9Y2Y1 108 aaPredicted RBP9.76□□□□□ -0.85
VTI1A-208ENST00000494728 PPIAL4AQ9Y536 164 aa9.76□□□□□ -0.85
VTI1A-208ENST00000494728 INSIG2Q9Y5U4 225 aa9.76□□□□□ -0.85
VTI1A-208ENST00000494728 LYVE1Q9Y5Y7 322 aa9.76□□□□□ -0.85
VTI1A-208ENST00000494728 PPIAL4EA0A075B759 164 aa9.75□□□□□ -0.85
VTI1A-208ENST00000494728 PPIAL4CA0A0B4J2A2 164 aa9.75□□□□□ -0.85
VTI1A-208ENST00000494728 PPIAL4DF5H284 164 aa9.75□□□□□ -0.85
VTI1A-208ENST00000494728 BHLHE40O14503 412 aa9.75□□□□□ -0.85
VTI1A-208ENST00000494728 FOXH1O75593 365 aa9.75□□□□□ -0.85
VTI1A-208ENST00000494728 PPIAL4FP0DN26 164 aa9.75□□□□□ -0.85
VTI1A-208ENST00000494728 IGHV4-38-2P0DP08 117 aa9.75□□□□□ -0.85
VTI1A-208ENST00000494728 GATA3P23771 443 aa9.75□□□□□ -0.85
VTI1A-208ENST00000494728 PYCR1P32322 319 aa9.75□□□□□ -0.85
VTI1A-208ENST00000494728 MDH2P40926 338 aaKnown RBP9.75□□□□□ -0.85
VTI1A-208ENST00000494728 RGS6P49758 472 aa9.75□□□□□ -0.85
VTI1A-208ENST00000494728 UBA52P62987 128 aaKnown RBP9.75□□□□□ -0.85
VTI1A-208ENST00000494728 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.75□□□□□ -0.85
VTI1A-208ENST00000494728 TRAP1Q12931 704 aaKnown RBP9.75□□□□□ -0.85
VTI1A-208ENST00000494728 MAB21L1Q13394 359 aa9.75□□□□□ -0.85
VTI1A-208ENST00000494728 GK2Q14410 553 aaPredicted RBP9.75□□□□□ -0.85
VTI1A-208ENST00000494728 KRT72Q14CN4 511 aa9.75□□□□□ -0.85
VTI1A-208ENST00000494728 SNAI3Q3KNW1 292 aa9.75□□□□□ -0.85
VTI1A-208ENST00000494728 ZNF362Q5T0B9 420 aaPredicted RBP9.75□□□□□ -0.85
VTI1A-208ENST00000494728 ZNF770Q6IQ21 691 aaPredicted RBP9.75□□□□□ -0.85
VTI1A-208ENST00000494728 DNM1P34Q6PK57 102 aa9.75□□□□□ -0.85
VTI1A-208ENST00000494728 CYP2R1Q6VVX0 501 aa9.75□□□□□ -0.85
VTI1A-208ENST00000494728 ZDHHC21Q8IVQ6 265 aa9.75□□□□□ -0.85
VTI1A-208ENST00000494728 DEFB107AQ8IZN7 70 aa9.75□□□□□ -0.85
VTI1A-208ENST00000494728 BPIFB2Q8N4F0 458 aa9.75□□□□□ -0.85
VTI1A-208ENST00000494728 KLHL36Q8N4N3 616 aa9.75□□□□□ -0.85
VTI1A-208ENST00000494728 C19orf18Q8NEA5 215 aa9.75□□□□□ -0.85
VTI1A-208ENST00000494728 OR52E2Q8NGJ4 325 aa9.75□□□□□ -0.85
VTI1A-208ENST00000494728 OR51L1Q8NGJ5 315 aa9.75□□□□□ -0.85
VTI1A-208ENST00000494728 TAF15Q92804 592 aaKnown RBP eCLIP9.75□□□□□ -0.85
VTI1A-208ENST00000494728 COG8Q96MW5 612 aa9.75□□□□□ -0.85
VTI1A-208ENST00000494728 ATF6BQ99941 703 aa9.75□□□□□ -0.85
VTI1A-208ENST00000494728 IL1RAPQ9NPH3 570 aa9.75□□□□□ -0.85
VTI1A-208ENST00000494728 KRCC1Q9NPI7 259 aaPredicted RBP9.75□□□□□ -0.85
VTI1A-208ENST00000494728 PRKDCP78527 4128 aaKnown RBP9.75□□□□□ -0.85
VTI1A-208ENST00000494728 IGHV3OR16-10A0A075B7F0 116 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms