RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 FAM162AQ96A26 154 aa10.56□□□□□ -0.72
SKA1-205ENST00000494518 UPRTQ96BW1 309 aa10.56□□□□□ -0.72
SKA1-205ENST00000494518 NEIL1Q96FI4 390 aaPredicted RBP10.56□□□□□ -0.72
SKA1-205ENST00000494518 RSRC1Q96IZ7 334 aaKnown RBP10.56□□□□□ -0.72
SKA1-205ENST00000494518 COG8Q96MW5 612 aa10.56□□□□□ -0.72
SKA1-205ENST00000494518 ZNF582Q96NG8 517 aaPredicted RBP10.56□□□□□ -0.72
SKA1-205ENST00000494518 OR8B2Q96RD0 313 aa10.56□□□□□ -0.72
SKA1-205ENST00000494518 NUDT16L1Q9BRJ7 211 aaKnown RBP10.56□□□□□ -0.72
SKA1-205ENST00000494518 CDADC1Q9BWV3 514 aa10.56□□□□□ -0.72
SKA1-205ENST00000494518 NDEL1Q9GZM8 345 aa10.56□□□□□ -0.72
SKA1-205ENST00000494518 NMNAT1Q9HAN9 279 aaPredicted RBP10.56□□□□□ -0.72
SKA1-205ENST00000494518 TUBG2Q9NRH3 451 aa10.56□□□□□ -0.72
SKA1-205ENST00000494518 VSX1Q9NZR4 365 aaPredicted RBP10.56□□□□□ -0.72
SKA1-205ENST00000494518 RPS6KA6Q9UK32 745 aa10.56□□□□□ -0.72
SKA1-205ENST00000494518 SIGLEC7Q9Y286 467 aa10.56□□□□□ -0.72
SKA1-205ENST00000494518 TMEM5Q9Y2B1 443 aa10.56□□□□□ -0.72
SKA1-205ENST00000494518 LHFPL6Q9Y693 200 aa10.56□□□□□ -0.72
SKA1-205ENST00000494518 DCTN6O00399 190 aa10.55□□□□□ -0.72
SKA1-205ENST00000494518 PTP4A3O75365 173 aa10.55□□□□□ -0.72
SKA1-205ENST00000494518 SASH3O75995 380 aa10.55□□□□□ -0.72
SKA1-205ENST00000494518 PPP1R3DO95685 299 aa10.55□□□□□ -0.72
SKA1-205ENST00000494518 PLATP00750 562 aa10.55□□□□□ -0.72
SKA1-205ENST00000494518 GSK3BP49841 420 aa10.55□□□□□ -0.72
SKA1-205ENST00000494518 FXYD6P3P58550 94 aa10.55□□□□□ -0.72
SKA1-205ENST00000494518 FGF12P61328 243 aa10.55□□□□□ -0.72
SKA1-205ENST00000494518 DEFB112Q30KQ8 113 aa10.55□□□□□ -0.72
SKA1-205ENST00000494518 ZNF404Q494X3 552 aa10.55□□□□□ -0.72
SKA1-205ENST00000494518 LRRN1Q6UXK5 716 aa10.55□□□□□ -0.72
SKA1-205ENST00000494518 CYP4Z1Q86W10 505 aa10.55□□□□□ -0.72
SKA1-205ENST00000494518 FAM156AQ8NDB6 213 aa10.55□□□□□ -0.72
SKA1-205ENST00000494518 OR5L1Q8NGL2 311 aa10.55□□□□□ -0.72
SKA1-205ENST00000494518 OR10S1Q8NGN2 331 aa10.55□□□□□ -0.72
SKA1-205ENST00000494518 APOBEC3DQ96AK3 386 aaPredicted RBP10.55□□□□□ -0.72
SKA1-205ENST00000494518 TMIGD2Q96BF3 282 aa10.55□□□□□ -0.72
SKA1-205ENST00000494518 PLEKHA8Q96JA3 519 aa10.55□□□□□ -0.72
SKA1-205ENST00000494518 SLC30A2Q9BRI3 323 aa10.55□□□□□ -0.72
SKA1-205ENST00000494518 MARCH7Q9H992 704 aa10.55□□□□□ -0.72
SKA1-205ENST00000494518 NRIP3Q9NQ35 241 aa10.55□□□□□ -0.72
SKA1-205ENST00000494518 UFSP2Q9NUQ7 469 aa10.55□□□□□ -0.72
SKA1-205ENST00000494518 MIOXQ9UGB7 285 aa10.55□□□□□ -0.72
SKA1-205ENST00000494518 ENPP4Q9Y6X5 453 aa10.55□□□□□ -0.72
SKA1-205ENST00000494518 TRBV4-1A0A0J9YWV2 114 aa10.54□□□□□ -0.72
SKA1-205ENST00000494518 LRRC30A6NM36 301 aa10.54□□□□□ -0.72
SKA1-205ENST00000494518 IQCF6A8MYZ5 107 aa10.54□□□□□ -0.72
SKA1-205ENST00000494518 C22orf46C9J442 243 aa10.54□□□□□ -0.72
SKA1-205ENST00000494518 F5H5K5 113 aa10.54□□□□□ -0.72
SKA1-205ENST00000494518 CLDN34H7C241 214 aa10.54□□□□□ -0.72
SKA1-205ENST00000494518 IFNL4K9M1U5 179 aa10.54□□□□□ -0.72
SKA1-205ENST00000494518 LCE2BO14633 110 aa10.54□□□□□ -0.72
SKA1-205ENST00000494518 AHCYL1O43865 530 aa10.54□□□□□ -0.72
SKA1-205ENST00000494518 H1F0P07305 194 aaKnown RBP10.54□□□□□ -0.72
SKA1-205ENST00000494518 FPR3P25089 353 aa10.54□□□□□ -0.72
SKA1-205ENST00000494518 OMPP47874 163 aa10.54□□□□□ -0.72
SKA1-205ENST00000494518 RGS6P49758 472 aa10.54□□□□□ -0.72
SKA1-205ENST00000494518 SEC23BQ15437 767 aa10.54□□□□□ -0.72
SKA1-205ENST00000494518 MIDNQ504T8 468 aa10.54□□□□□ -0.72
SKA1-205ENST00000494518 PDLIM3Q53GG5 364 aaPredicted RBP10.54□□□□□ -0.72
SKA1-205ENST00000494518 GPR139Q6DWJ6 353 aa10.54□□□□□ -0.72
SKA1-205ENST00000494518 CFAP77Q6ZQR2 320 aa10.54□□□□□ -0.72
SKA1-205ENST00000494518 C9orf139Q6ZV77 190 aa10.54□□□□□ -0.72
SKA1-205ENST00000494518 NLRC3Q7RTR2 1065 aa10.54□□□□□ -0.72
SKA1-205ENST00000494518 NAA40Q86UY6 237 aa10.54□□□□□ -0.72
SKA1-205ENST00000494518 FITM2Q8N6M3 262 aa10.54□□□□□ -0.72
SKA1-205ENST00000494518 KIR3DL3Q8N743 410 aa10.54□□□□□ -0.72
SKA1-205ENST00000494518 BOLLQ8N9W6 283 aaKnown RBP10.54□□□□□ -0.72
SKA1-205ENST00000494518 OR52J3Q8NH60 311 aa10.54□□□□□ -0.72
SKA1-205ENST00000494518 DACT3Q96B18 629 aaPredicted RBP10.54□□□□□ -0.72
SKA1-205ENST00000494518 COQ7Q99807 217 aa10.54□□□□□ -0.72
SKA1-205ENST00000494518 FN3KQ9H479 309 aa10.54□□□□□ -0.72
SKA1-205ENST00000494518 SRA1Q9HD15 236 aaKnown RBP10.54□□□□□ -0.72
SKA1-205ENST00000494518 TMEM100Q9NV29 134 aa10.54□□□□□ -0.72
SKA1-205ENST00000494518 CLN8Q9UBY8 286 aa10.54□□□□□ -0.72
SKA1-205ENST00000494518 TMCC3Q9ULS5 477 aa10.54□□□□□ -0.72
SKA1-205ENST00000494518 AURKCQ9UQB9 309 aa10.54□□□□□ -0.72
SKA1-205ENST00000494518 V9GYQ6 96 aa10.54□□□□□ -0.72
SKA1-205ENST00000494518 FAM181BA6NEQ2 426 aa10.53□□□□□ -0.72
SKA1-205ENST00000494518 UNC119BA6NIH7 251 aa10.53□□□□□ -0.72
SKA1-205ENST00000494518 POM121CA8CG34 1229 aa10.53□□□□□ -0.72
SKA1-205ENST00000494518 FAM20BO75063 409 aa10.53□□□□□ -0.72
SKA1-205ENST00000494518 SFTPBP07988 381 aa10.53□□□□□ -0.72
SKA1-205ENST00000494518 COX4I1P13073 169 aa10.53□□□□□ -0.72
SKA1-205ENST00000494518 IRF2P14316 349 aa10.53□□□□□ -0.72
SKA1-205ENST00000494518 MAB21L1Q13394 359 aa10.53□□□□□ -0.72
SKA1-205ENST00000494518 MPPED2Q15777 294 aa10.53□□□□□ -0.72
SKA1-205ENST00000494518 RSPO1Q2MKA7 263 aaPredicted RBP10.53□□□□□ -0.72
SKA1-205ENST00000494518 WDR25Q64LD2 544 aaPredicted RBP10.53□□□□□ -0.72
SKA1-205ENST00000494518 C16orf87Q6PH81 154 aa10.53□□□□□ -0.72
SKA1-205ENST00000494518 ARPINQ7Z6K5 226 aa10.53□□□□□ -0.72
SKA1-205ENST00000494518 ADCK1Q86TW2 530 aa10.53□□□□□ -0.72
SKA1-205ENST00000494518 GJC3Q8NFK1 279 aa10.53□□□□□ -0.72
SKA1-205ENST00000494518 FANK1Q8TC84 345 aa10.53□□□□□ -0.72
SKA1-205ENST00000494518 TECTBQ96PL2 329 aa10.53□□□□□ -0.72
SKA1-205ENST00000494518 ERMAPQ96PL5 475 aaPredicted RBP10.53□□□□□ -0.72
SKA1-205ENST00000494518 GPX7Q96SL4 187 aaPredicted RBP10.53□□□□□ -0.72
SKA1-205ENST00000494518 PITX2Q99697 317 aa10.53□□□□□ -0.72
SKA1-205ENST00000494518 KCTD14Q9BQ13 255 aaPredicted RBP10.53□□□□□ -0.72
SKA1-205ENST00000494518 PCGF1Q9BSM1 259 aa10.53□□□□□ -0.72
SKA1-205ENST00000494518 HCAR1Q9BXC0 346 aa10.53□□□□□ -0.72
SKA1-205ENST00000494518 HDHD2Q9H0R4 259 aa10.53□□□□□ -0.72
SKA1-205ENST00000494518 MMADHCQ9H3L0 296 aaPredicted RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms