RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 HIPK1Q86Z02 1210 aa19.23■□□□□ 0.67
SNIP1-203ENST00000493916 DNAJC9Q8WXX5 260 aa19.23■□□□□ 0.67
SNIP1-203ENST00000493916 ELMOD3Q96FG2 381 aa19.23■□□□□ 0.67
SNIP1-203ENST00000493916 SOX7Q9BT81 388 aa19.23■□□□□ 0.67
SNIP1-203ENST00000493916 WDR76Q9H967 626 aa19.23■□□□□ 0.67
SNIP1-203ENST00000493916 MSL2Q9HCI7 577 aa19.23■□□□□ 0.67
SNIP1-203ENST00000493916 SONP18583 2426 aaKnown RBP19.22■□□□□ 0.67
SNIP1-203ENST00000493916 LOC100289279A0A1B0GTE1 492 aa19.22■□□□□ 0.67
SNIP1-203ENST00000493916 PPIHO43447 177 aaKnown RBP19.22■□□□□ 0.67
SNIP1-203ENST00000493916 CDC14BO60729 498 aa19.22■□□□□ 0.67
SNIP1-203ENST00000493916 TIPRLO75663 272 aa19.22■□□□□ 0.67
SNIP1-203ENST00000493916 CLUP10909 449 aa19.22■□□□□ 0.67
SNIP1-203ENST00000493916 PSKH1P11801 424 aa19.22■□□□□ 0.67
SNIP1-203ENST00000493916 PRKACGP22612 351 aa19.22■□□□□ 0.67
SNIP1-203ENST00000493916 RPS27P42677 84 aaKnown RBP19.22■□□□□ 0.67
SNIP1-203ENST00000493916 ENTPD1P49961 510 aa19.22■□□□□ 0.67
SNIP1-203ENST00000493916 TEX30Q5JUR7 227 aa19.22■□□□□ 0.67
SNIP1-203ENST00000493916 LINC01590Q5TEZ4 76 aa19.22■□□□□ 0.67
SNIP1-203ENST00000493916 FAM166AQ6J272 317 aa19.22■□□□□ 0.67
SNIP1-203ENST00000493916 ATG16L2Q8NAA4 619 aa19.22■□□□□ 0.67
SNIP1-203ENST00000493916 OR10S1Q8NGN2 331 aa19.22■□□□□ 0.67
SNIP1-203ENST00000493916 PTTG3PQ9NZH4 202 aa19.22■□□□□ 0.67
SNIP1-203ENST00000493916 F5H5K5 113 aa19.21■□□□□ 0.67
SNIP1-203ENST00000493916 POU1F1P28069 291 aa19.21■□□□□ 0.67
SNIP1-203ENST00000493916 CDK5Q00535 292 aa19.21■□□□□ 0.67
SNIP1-203ENST00000493916 GINS1Q14691 196 aa19.21■□□□□ 0.67
SNIP1-203ENST00000493916 HLXQ14774 488 aaPredicted RBP19.21■□□□□ 0.67
SNIP1-203ENST00000493916 HFEQ30201 348 aa19.21■□□□□ 0.67
SNIP1-203ENST00000493916 C1orf146Q5VVC0 180 aa19.21■□□□□ 0.67
SNIP1-203ENST00000493916 ACSM5Q6NUN0 579 aa19.21■□□□□ 0.67
SNIP1-203ENST00000493916 Q6ZR03 302 aa19.21■□□□□ 0.67
SNIP1-203ENST00000493916 ZNF511Q8NB15 262 aa19.21■□□□□ 0.67
SNIP1-203ENST00000493916 OR6K6Q8NGW6 343 aa19.21■□□□□ 0.67
SNIP1-203ENST00000493916 DUS3LQ96G46 650 aaKnown RBP19.21■□□□□ 0.67
SNIP1-203ENST00000493916 HCAR1Q9BXC0 346 aa19.21■□□□□ 0.67
SNIP1-203ENST00000493916 KCNS2Q9ULS6 477 aa19.21■□□□□ 0.67
SNIP1-203ENST00000493916 LMX1BO60663 402 aa19.2■□□□□ 0.66
SNIP1-203ENST00000493916 HMGN1P05114 100 aa19.2■□□□□ 0.66
SNIP1-203ENST00000493916 SPARCP09486 303 aa19.2■□□□□ 0.66
SNIP1-203ENST00000493916 PAICSP22234 425 aaKnown RBP19.2■□□□□ 0.66
SNIP1-203ENST00000493916 OTX1P32242 354 aaPredicted RBP19.2■□□□□ 0.66
SNIP1-203ENST00000493916 TPTEP56180 551 aa19.2■□□□□ 0.66
SNIP1-203ENST00000493916 ATP6AP1Q15904 470 aa19.2■□□□□ 0.66
SNIP1-203ENST00000493916 FAHD1Q6P587 224 aa19.2■□□□□ 0.66
SNIP1-203ENST00000493916 DCXRQ7Z4W1 244 aa19.2■□□□□ 0.66
SNIP1-203ENST00000493916 CLDND2Q8NHS1 167 aa19.2■□□□□ 0.66
SNIP1-203ENST00000493916 SPTSSAQ969W0 71 aa19.2■□□□□ 0.66
SNIP1-203ENST00000493916 MED20Q9H944 212 aa19.2■□□□□ 0.66
SNIP1-203ENST00000493916 KIF17Q9P2E2 1029 aa19.2■□□□□ 0.66
SNIP1-203ENST00000493916 CDC42EP3Q9UKI2 254 aa19.2■□□□□ 0.66
SNIP1-203ENST00000493916 CACNG2Q9Y698 323 aa19.2■□□□□ 0.66
SNIP1-203ENST00000493916 FAM183AA6NL82 134 aa19.19■□□□□ 0.66
SNIP1-203ENST00000493916 CLDN25C9JDP6 229 aa19.19■□□□□ 0.66
SNIP1-203ENST00000493916 M0R135 149 aa19.19■□□□□ 0.66
SNIP1-203ENST00000493916 ZNF593O00488 134 aaPredicted RBP19.19■□□□□ 0.66
SNIP1-203ENST00000493916 SURF4O15260 269 aa19.19■□□□□ 0.66
SNIP1-203ENST00000493916 TNFSF4P23510 183 aa19.19■□□□□ 0.66
SNIP1-203ENST00000493916 CDH15P55291 814 aa19.19■□□□□ 0.66
SNIP1-203ENST00000493916 TNFAIP6P98066 277 aaPredicted RBP19.19■□□□□ 0.66
SNIP1-203ENST00000493916 CCNIQ14094 377 aa19.19■□□□□ 0.66
SNIP1-203ENST00000493916 PRIMA1Q86XR5 153 aa19.19■□□□□ 0.66
SNIP1-203ENST00000493916 PARP8Q8N3A8 854 aa19.19■□□□□ 0.66
SNIP1-203ENST00000493916 LINC01356Q8N9X3 169 aa19.19■□□□□ 0.66
SNIP1-203ENST00000493916 OR5K1Q8NHB7 308 aa19.19■□□□□ 0.66
SNIP1-203ENST00000493916 ZNF799Q96GE5 643 aa19.19■□□□□ 0.66
SNIP1-203ENST00000493916 MARCH7Q9H992 704 aa19.19■□□□□ 0.66
SNIP1-203ENST00000493916 SLC25A19Q9HC21 320 aa19.19■□□□□ 0.66
SNIP1-203ENST00000493916 PAPOLBQ9NRJ5 636 aaKnown RBP19.19■□□□□ 0.66
SNIP1-203ENST00000493916 LPAR3Q9UBY5 353 aa19.19■□□□□ 0.66
SNIP1-203ENST00000493916 WNT9BO14905 357 aa19.18■□□□□ 0.66
SNIP1-203ENST00000493916 GLCEO94923 617 aa19.18■□□□□ 0.66
SNIP1-203ENST00000493916 TGFAP01135 160 aa19.18■□□□□ 0.66
SNIP1-203ENST00000493916 CHRFAM7AQ494W8 412 aa19.18■□□□□ 0.66
SNIP1-203ENST00000493916 OR2T2Q6IF00 324 aa19.18■□□□□ 0.66
SNIP1-203ENST00000493916 ASRGL1Q7L266 308 aa19.18■□□□□ 0.66
SNIP1-203ENST00000493916 OR2Z1Q8NG97 314 aa19.18■□□□□ 0.66
SNIP1-203ENST00000493916 ST7LQ8TDW4 575 aa19.18■□□□□ 0.66
SNIP1-203ENST00000493916 SLAMF6Q96DU3 332 aa19.18■□□□□ 0.66
SNIP1-203ENST00000493916 INTS14Q96SY0 518 aa19.18■□□□□ 0.66
SNIP1-203ENST00000493916 AP4S1Q9Y587 144 aa19.18■□□□□ 0.66
SNIP1-203ENST00000493916 ABCA2Q9BZC7 2435 aa19.17■□□□□ 0.66
SNIP1-203ENST00000493916 IQCF6A8MYZ5 107 aa19.17■□□□□ 0.66
SNIP1-203ENST00000493916 PRR23D1E9PI22 279 aaPredicted RBP19.17■□□□□ 0.66
SNIP1-203ENST00000493916 LCATP04180 440 aa19.17■□□□□ 0.66
SNIP1-203ENST00000493916 PRR23D2P0DMB1 279 aaPredicted RBP19.17■□□□□ 0.66
SNIP1-203ENST00000493916 FCGR1AP12314 374 aa19.17■□□□□ 0.66
SNIP1-203ENST00000493916 SELEP16581 610 aa19.17■□□□□ 0.66
SNIP1-203ENST00000493916 IGFBP5P24593 272 aa19.17■□□□□ 0.66
SNIP1-203ENST00000493916 GSTT1P30711 240 aa19.17■□□□□ 0.66
SNIP1-203ENST00000493916 SLC3A1Q07837 685 aa19.17■□□□□ 0.66
SNIP1-203ENST00000493916 MALLQ13021 153 aa19.17■□□□□ 0.66
SNIP1-203ENST00000493916 SPRNQ5BIV9 151 aa19.17■□□□□ 0.66
SNIP1-203ENST00000493916 DRAM2Q6UX65 266 aa19.17■□□□□ 0.66
SNIP1-203ENST00000493916 NAA40Q86UY6 237 aa19.17■□□□□ 0.66
SNIP1-203ENST00000493916 OR5AS1Q8N127 324 aa19.17■□□□□ 0.66
SNIP1-203ENST00000493916 OR8G5Q8NG78 346 aa19.17■□□□□ 0.66
SNIP1-203ENST00000493916 CCL17Q92583 94 aa19.17■□□□□ 0.66
SNIP1-203ENST00000493916 OTULINQ96BN8 352 aa19.17■□□□□ 0.66
SNIP1-203ENST00000493916 TIMD4Q96H15 378 aa19.17■□□□□ 0.66
SNIP1-203ENST00000493916 ZNF582Q96NG8 517 aaPredicted RBP19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms