RNA–Protein interactions for RNA: ENST00000492451.1

PTPN7-215, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 5

Gene PTPN7, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-215ENST00000492451 C9orf16Q9BUW7 83 aa11.82□□□□□ -0.52
PTPN7-215ENST00000492451 C1QTNF5Q9BXJ0 243 aa11.82□□□□□ -0.52
PTPN7-215ENST00000492451 TPK1Q9H3S4 243 aa11.82□□□□□ -0.52
PTPN7-215ENST00000492451 USE1Q9NZ43 259 aa11.82□□□□□ -0.52
PTPN7-215ENST00000492451 ZANQ9Y493 2812 aa11.81□□□□□ -0.52
PTPN7-215ENST00000492451 NAV3Q8IVL0 2385 aa11.81□□□□□ -0.52
PTPN7-215ENST00000492451 C17orf100A8MU93 164 aa11.81□□□□□ -0.52
PTPN7-215ENST00000492451 ZNF878C9JN71 531 aa11.81□□□□□ -0.52
PTPN7-215ENST00000492451 LY6HO94772 140 aa11.81□□□□□ -0.52
PTPN7-215ENST00000492451 LY6G6DO95868 133 aa11.81□□□□□ -0.52
PTPN7-215ENST00000492451 ALPLP05186 524 aa11.81□□□□□ -0.52
PTPN7-215ENST00000492451 NAT2P11245 290 aa11.81□□□□□ -0.52
PTPN7-215ENST00000492451 DAOP14920 347 aa11.81□□□□□ -0.52
PTPN7-215ENST00000492451 RAC2P15153 192 aa11.81□□□□□ -0.52
PTPN7-215ENST00000492451 SLC25A16P16260 332 aa11.81□□□□□ -0.52
PTPN7-215ENST00000492451 RPS27P42677 84 aaKnown RBP11.81□□□□□ -0.52
PTPN7-215ENST00000492451 ALDH3A2P51648 485 aa11.81□□□□□ -0.52
PTPN7-215ENST00000492451 MALLQ13021 153 aa11.81□□□□□ -0.52
PTPN7-215ENST00000492451 APOFQ13790 326 aa11.81□□□□□ -0.52
PTPN7-215ENST00000492451 EIF2B1Q14232 305 aaKnown RBP11.81□□□□□ -0.52
PTPN7-215ENST00000492451 LCN1P1Q5VSP4 162 aa11.81□□□□□ -0.52
PTPN7-215ENST00000492451 DRAM2Q6UX65 266 aa11.81□□□□□ -0.52
PTPN7-215ENST00000492451 COLCA1Q6ZS62 124 aa11.81□□□□□ -0.52
PTPN7-215ENST00000492451 RHOUQ7L0Q8 258 aa11.81□□□□□ -0.52
PTPN7-215ENST00000492451 DPY19L4Q7Z388 723 aa11.81□□□□□ -0.52
PTPN7-215ENST00000492451 BIVMQ86UB2 503 aa11.81□□□□□ -0.52
PTPN7-215ENST00000492451 TIGD4Q8IY51 512 aa11.81□□□□□ -0.52
PTPN7-215ENST00000492451 PQLC1Q8N2U9 271 aa11.81□□□□□ -0.52
PTPN7-215ENST00000492451 ZNF454Q8N9F8 522 aa11.81□□□□□ -0.52
PTPN7-215ENST00000492451 OR10S1Q8NGN2 331 aa11.81□□□□□ -0.52
PTPN7-215ENST00000492451 ST7LQ8TDW4 575 aa11.81□□□□□ -0.52
PTPN7-215ENST00000492451 C10orf105Q8TEF2 133 aa11.81□□□□□ -0.52
PTPN7-215ENST00000492451 UBASH3BQ8TF42 649 aa11.81□□□□□ -0.52
PTPN7-215ENST00000492451 HAVCR1Q96D42 359 aa11.81□□□□□ -0.52
PTPN7-215ENST00000492451 ZMYND19Q96E35 227 aaPredicted RBP11.81□□□□□ -0.52
PTPN7-215ENST00000492451 COPS4Q9BT78 406 aa11.81□□□□□ -0.52
PTPN7-215ENST00000492451 REG4Q9BYZ8 158 aa11.81□□□□□ -0.52
PTPN7-215ENST00000492451 TOR3AQ9H497 397 aa11.81□□□□□ -0.52
PTPN7-215ENST00000492451 RIBC2Q9H4K1 309 aa11.81□□□□□ -0.52
PTPN7-215ENST00000492451 CENPMQ9NSP4 180 aa11.81□□□□□ -0.52
PTPN7-215ENST00000492451 NKIRAS2Q9NYR9 191 aa11.81□□□□□ -0.52
PTPN7-215ENST00000492451 H2AFY2Q9P0M6 372 aaPredicted RBP11.81□□□□□ -0.52
PTPN7-215ENST00000492451 RNF223E7ERA6 249 aa11.8□□□□□ -0.52
PTPN7-215ENST00000492451 M0R135 149 aa11.8□□□□□ -0.52
PTPN7-215ENST00000492451 EI24O14681 340 aa11.8□□□□□ -0.52
PTPN7-215ENST00000492451 SMAD7O15105 426 aaKnown RBP11.8□□□□□ -0.52
PTPN7-215ENST00000492451 TLX2O43763 284 aaPredicted RBP11.8□□□□□ -0.52
PTPN7-215ENST00000492451 PRKYO43930 277 aa11.8□□□□□ -0.52
PTPN7-215ENST00000492451 TIMM8AO60220 97 aaPredicted RBP11.8□□□□□ -0.52
PTPN7-215ENST00000492451 APOC1P02654 83 aa11.8□□□□□ -0.52
PTPN7-215ENST00000492451 LCATP04180 440 aa11.8□□□□□ -0.52
PTPN7-215ENST00000492451 KITLGP21583 273 aa11.8□□□□□ -0.52
PTPN7-215ENST00000492451 SLC2A5P22732 501 aa11.8□□□□□ -0.52
PTPN7-215ENST00000492451 EPHA2P29317 976 aa11.8□□□□□ -0.52
PTPN7-215ENST00000492451 OTX1P32242 354 aaPredicted RBP11.8□□□□□ -0.52
PTPN7-215ENST00000492451 ZNF81P51508 661 aa11.8□□□□□ -0.52
PTPN7-215ENST00000492451 MMP15P51511 669 aa11.8□□□□□ -0.52
PTPN7-215ENST00000492451 GRB2P62993 217 aaKnown RBP11.8□□□□□ -0.52
PTPN7-215ENST00000492451 MRPS11P82912 194 aaKnown RBP11.8□□□□□ -0.52
PTPN7-215ENST00000492451 EFNB1P98172 346 aa11.8□□□□□ -0.52
PTPN7-215ENST00000492451 PSG7Q13046 419 aa11.8□□□□□ -0.52
PTPN7-215ENST00000492451 ALKBH6Q3KRA9 238 aa11.8□□□□□ -0.52
PTPN7-215ENST00000492451 FBXW12Q6X9E4 464 aa11.8□□□□□ -0.52
PTPN7-215ENST00000492451 ZNF786Q8N393 782 aa11.8□□□□□ -0.52
PTPN7-215ENST00000492451 CBR4Q8N4T8 237 aa11.8□□□□□ -0.52
PTPN7-215ENST00000492451 TCEANCQ8N8B7 351 aa11.8□□□□□ -0.52
PTPN7-215ENST00000492451 ZNF540Q8NDQ6 660 aa11.8□□□□□ -0.52
PTPN7-215ENST00000492451 BBS1Q8NFJ9 593 aa11.8□□□□□ -0.52
PTPN7-215ENST00000492451 TMEM163Q8TC26 289 aa11.8□□□□□ -0.52
PTPN7-215ENST00000492451 ZNF799Q96GE5 643 aa11.8□□□□□ -0.52
PTPN7-215ENST00000492451 DIRC2Q96SL1 478 aa11.8□□□□□ -0.52
PTPN7-215ENST00000492451 TEAD3Q99594 435 aa11.8□□□□□ -0.52
PTPN7-215ENST00000492451 KCNJ15Q99712 375 aa11.8□□□□□ -0.52
PTPN7-215ENST00000492451 PIMREGQ9BSJ6 248 aa11.8□□□□□ -0.52
PTPN7-215ENST00000492451 ABHD6Q9BV23 337 aa11.8□□□□□ -0.52
PTPN7-215ENST00000492451 ZDHHC8Q9ULC8 765 aa11.8□□□□□ -0.52
PTPN7-215ENST00000492451 FN1P02751 2386 aaKnown RBP11.8□□□□□ -0.52
PTPN7-215ENST00000492451 NSD1Q96L73 2696 aaPredicted RBP11.8□□□□□ -0.52
PTPN7-215ENST00000492451 CHD3Q12873 2000 aaKnown RBP11.79□□□□□ -0.52
PTPN7-215ENST00000492451 IGHV4-30-2A0A087WSY4 118 aa11.79□□□□□ -0.52
PTPN7-215ENST00000492451 BAG2O95816 211 aa11.79□□□□□ -0.52
PTPN7-215ENST00000492451 LYNP07948 512 aa11.79□□□□□ -0.52
PTPN7-215ENST00000492451 PSKH1P11801 424 aa11.79□□□□□ -0.52
PTPN7-215ENST00000492451 SELEP16581 610 aa11.79□□□□□ -0.52
PTPN7-215ENST00000492451 HSD11B1P28845 292 aa11.79□□□□□ -0.52
PTPN7-215ENST00000492451 POLR2IP36954 125 aaKnown RBP11.79□□□□□ -0.52
PTPN7-215ENST00000492451 SLC6A9P48067 706 aa11.79□□□□□ -0.52
PTPN7-215ENST00000492451 CARTPTQ16568 116 aa11.79□□□□□ -0.52
PTPN7-215ENST00000492451 FAM209AQ5JX71 171 aa11.79□□□□□ -0.52
PTPN7-215ENST00000492451 NXNL2Q5VZ03 156 aa11.79□□□□□ -0.52
PTPN7-215ENST00000492451 CLEC9AQ6UXN8 241 aa11.79□□□□□ -0.52
PTPN7-215ENST00000492451 MEPCEQ7L2J0 689 aaKnown RBP11.79□□□□□ -0.52
PTPN7-215ENST00000492451 SLC16A9Q7RTY1 509 aa11.79□□□□□ -0.52
PTPN7-215ENST00000492451 GID4Q8IVV7 300 aa11.79□□□□□ -0.52
PTPN7-215ENST00000492451 OTOSQ8NHW6 89 aa11.79□□□□□ -0.52
PTPN7-215ENST00000492451 RNF133Q8WVZ7 376 aa11.79□□□□□ -0.52
PTPN7-215ENST00000492451 EME1Q96AY2 570 aa11.79□□□□□ -0.52
PTPN7-215ENST00000492451 CMBLQ96DG6 245 aa11.79□□□□□ -0.52
PTPN7-215ENST00000492451 YIPF3Q9GZM5 350 aa11.79□□□□□ -0.52
PTPN7-215ENST00000492451 POFUT1Q9H488 388 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms