RNA–Protein interactions for RNA: ENST00000491967.1

SMARCB1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 605 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-207ENST00000491967 IL20Q9NYY1 176 aa7.03□□□□□ -1.28
SMARCB1-207ENST00000491967 MAGEL2Q9UJ55 1249 aa7.03□□□□□ -1.28
SMARCB1-207ENST00000491967 AURKCQ9UQB9 309 aa7.03□□□□□ -1.28
SMARCB1-207ENST00000491967 PPP1R3CQ9UQK1 317 aa7.03□□□□□ -1.28
SMARCB1-207ENST00000491967 PKD1L1Q8TDX9 2849 aa7.03□□□□□ -1.28
SMARCB1-207ENST00000491967 CLDN34H7C241 214 aa7.02□□□□□ -1.29
SMARCB1-207ENST00000491967 BHLHE40O14503 412 aa7.02□□□□□ -1.29
SMARCB1-207ENST00000491967 DYNC1I1O14576 645 aa7.02□□□□□ -1.29
SMARCB1-207ENST00000491967 TNFRSF13BO14836 293 aaPredicted RBP7.02□□□□□ -1.29
SMARCB1-207ENST00000491967 MLNRO43193 412 aa7.02□□□□□ -1.29
SMARCB1-207ENST00000491967 KRT36O76013 467 aa7.02□□□□□ -1.29
SMARCB1-207ENST00000491967 GADD45GO95257 159 aa7.02□□□□□ -1.29
SMARCB1-207ENST00000491967 HIST1H1CP16403 213 aaKnown RBP7.02□□□□□ -1.29
SMARCB1-207ENST00000491967 SLC6A6P31641 620 aa7.02□□□□□ -1.29
SMARCB1-207ENST00000491967 CD80P33681 288 aa7.02□□□□□ -1.29
SMARCB1-207ENST00000491967 MAGEA2P43356 314 aa7.02□□□□□ -1.29
SMARCB1-207ENST00000491967 RAD23AP54725 363 aa7.02□□□□□ -1.29
SMARCB1-207ENST00000491967 SEC61A1P61619 476 aaKnown RBP7.02□□□□□ -1.29
SMARCB1-207ENST00000491967 TSPAN31Q12999 210 aa7.02□□□□□ -1.29
SMARCB1-207ENST00000491967 GK2Q14410 553 aaPredicted RBP7.02□□□□□ -1.29
SMARCB1-207ENST00000491967 KRT72Q14CN4 511 aa7.02□□□□□ -1.29
SMARCB1-207ENST00000491967 MEP1BQ16820 701 aa7.02□□□□□ -1.29
SMARCB1-207ENST00000491967 SAMD4BQ5PRF9 694 aaKnown RBP7.02□□□□□ -1.29
SMARCB1-207ENST00000491967 OR2T2Q6IF00 324 aa7.02□□□□□ -1.29
SMARCB1-207ENST00000491967 PGBD2Q6P3X8 592 aa7.02□□□□□ -1.29
SMARCB1-207ENST00000491967 DNM1P34Q6PK57 102 aa7.02□□□□□ -1.29
SMARCB1-207ENST00000491967 CORO6Q6QEF8 472 aa7.02□□□□□ -1.29
SMARCB1-207ENST00000491967 C12orf54Q6X4T0 127 aa7.02□□□□□ -1.29
SMARCB1-207ENST00000491967 ZNF620Q6ZNG0 422 aa7.02□□□□□ -1.29
SMARCB1-207ENST00000491967 CFAP77Q6ZQR2 320 aa7.02□□□□□ -1.29
SMARCB1-207ENST00000491967 MUC20Q8N307 709 aaPredicted RBP7.02□□□□□ -1.29
SMARCB1-207ENST00000491967 RNF148Q8N7C7 305 aa7.02□□□□□ -1.29
SMARCB1-207ENST00000491967 OR10S1Q8NGN2 331 aa7.02□□□□□ -1.29
SMARCB1-207ENST00000491967 OR4K13Q8NH42 304 aa7.02□□□□□ -1.29
SMARCB1-207ENST00000491967 Q8TCH9 128 aa7.02□□□□□ -1.29
SMARCB1-207ENST00000491967 ST7LQ8TDW4 575 aa7.02□□□□□ -1.29
SMARCB1-207ENST00000491967 ERGIC1Q969X5 290 aa7.02□□□□□ -1.29
SMARCB1-207ENST00000491967 C1orf147Q96MC9 270 aaPredicted RBP7.02□□□□□ -1.29
SMARCB1-207ENST00000491967 ZNF582Q96NG8 517 aaPredicted RBP7.02□□□□□ -1.29
SMARCB1-207ENST00000491967 NMNAT3Q96T66 252 aa7.02□□□□□ -1.29
SMARCB1-207ENST00000491967 SLC6A7Q99884 636 aa7.02□□□□□ -1.29
SMARCB1-207ENST00000491967 TRIM15Q9C019 465 aa7.02□□□□□ -1.29
SMARCB1-207ENST00000491967 PRDM13Q9H4Q3 707 aa7.02□□□□□ -1.29
SMARCB1-207ENST00000491967 NTN4Q9HB63 628 aa7.02□□□□□ -1.29
SMARCB1-207ENST00000491967 SRA1Q9HD15 236 aaKnown RBP7.02□□□□□ -1.29
SMARCB1-207ENST00000491967 DDX28Q9NUL7 540 aaKnown RBP7.02□□□□□ -1.29
SMARCB1-207ENST00000491967 MRPL22Q9NWU5 206 aaKnown RBP7.02□□□□□ -1.29
SMARCB1-207ENST00000491967 UBAP1Q9NZ09 502 aa7.02□□□□□ -1.29
SMARCB1-207ENST00000491967 ADA2Q9NZK5 511 aa7.02□□□□□ -1.29
SMARCB1-207ENST00000491967 KCNG2Q9UJ96 466 aa7.02□□□□□ -1.29
SMARCB1-207ENST00000491967 NUP50Q9UKX7 468 aa7.02□□□□□ -1.29
SMARCB1-207ENST00000491967 LRCH1Q9Y2L9 728 aa7.02□□□□□ -1.29
SMARCB1-207ENST00000491967 KIR2DS1A0A191URI9 304 aa7.01□□□□□ -1.29
SMARCB1-207ENST00000491967 ISPDA4D126 451 aa7.01□□□□□ -1.29
SMARCB1-207ENST00000491967 CEACAM18A8MTB9 384 aa7.01□□□□□ -1.29
SMARCB1-207ENST00000491967 H0YL77 283 aa7.01□□□□□ -1.29
SMARCB1-207ENST00000491967 ARPC2O15144 300 aa7.01□□□□□ -1.29
SMARCB1-207ENST00000491967 SELEP16581 610 aa7.01□□□□□ -1.29
SMARCB1-207ENST00000491967 EGR1P18146 543 aa7.01□□□□□ -1.29
SMARCB1-207ENST00000491967 FPR2P25090 351 aa7.01□□□□□ -1.29
SMARCB1-207ENST00000491967 MSX2P35548 267 aaPredicted RBP7.01□□□□□ -1.29
SMARCB1-207ENST00000491967 IFNGR2P38484 337 aa7.01□□□□□ -1.29
SMARCB1-207ENST00000491967 CD200P41217 278 aa7.01□□□□□ -1.29
SMARCB1-207ENST00000491967 SRP9P49458 86 aaKnown RBP7.01□□□□□ -1.29
SMARCB1-207ENST00000491967 UBA52P62987 128 aaKnown RBP7.01□□□□□ -1.29
SMARCB1-207ENST00000491967 MAB21L1Q13394 359 aa7.01□□□□□ -1.29
SMARCB1-207ENST00000491967 ZNF404Q494X3 552 aa7.01□□□□□ -1.29
SMARCB1-207ENST00000491967 SLC36A3Q495N2 470 aa7.01□□□□□ -1.29
SMARCB1-207ENST00000491967 LEG1Q6P5S2 330 aa7.01□□□□□ -1.29
SMARCB1-207ENST00000491967 ZNF841Q6ZN19 808 aa7.01□□□□□ -1.29
SMARCB1-207ENST00000491967 NAA40Q86UY6 237 aa7.01□□□□□ -1.29
SMARCB1-207ENST00000491967 PLPP7Q8NBV4 271 aa7.01□□□□□ -1.29
SMARCB1-207ENST00000491967 OR4C15Q8NGM1 316 aa7.01□□□□□ -1.29
SMARCB1-207ENST00000491967 FANK1Q8TC84 345 aa7.01□□□□□ -1.29
SMARCB1-207ENST00000491967 UPRTQ96BW1 309 aa7.01□□□□□ -1.29
SMARCB1-207ENST00000491967 MAP6Q96JE9 813 aa7.01□□□□□ -1.29
SMARCB1-207ENST00000491967 CDRT15Q96T59 188 aa7.01□□□□□ -1.29
SMARCB1-207ENST00000491967 ATF6BQ99941 703 aa7.01□□□□□ -1.29
SMARCB1-207ENST00000491967 NMNAT2Q9BZQ4 307 aa7.01□□□□□ -1.29
SMARCB1-207ENST00000491967 TMEM100Q9NV29 134 aa7.01□□□□□ -1.29
SMARCB1-207ENST00000491967 PTTG3PQ9NZH4 202 aa7.01□□□□□ -1.29
SMARCB1-207ENST00000491967 TAGLN3Q9UI15 199 aa7.01□□□□□ -1.29
SMARCB1-207ENST00000491967 AUP1Q9Y679 476 aa7.01□□□□□ -1.29
SMARCB1-207ENST00000491967 F5H5P2 479 aa7□□□□□ -1.29
SMARCB1-207ENST00000491967 OR10H3O60404 316 aa7□□□□□ -1.29
SMARCB1-207ENST00000491967 GMNNO75496 209 aa7□□□□□ -1.29
SMARCB1-207ENST00000491967 PLATP00750 562 aa7□□□□□ -1.29
SMARCB1-207ENST00000491967 RENP00797 406 aa7□□□□□ -1.29
SMARCB1-207ENST00000491967 FABP3P05413 133 aa7□□□□□ -1.29
SMARCB1-207ENST00000491967 HKR1P10072 659 aa7□□□□□ -1.29
SMARCB1-207ENST00000491967 PRTN3P24158 256 aa7□□□□□ -1.29
SMARCB1-207ENST00000491967 NOS3P29474 1203 aa7□□□□□ -1.29
SMARCB1-207ENST00000491967 RRM2P31350 389 aa7□□□□□ -1.29
SMARCB1-207ENST00000491967 PSMB10P40306 273 aa7□□□□□ -1.29
SMARCB1-207ENST00000491967 SPIBQ01892 262 aa7□□□□□ -1.29
SMARCB1-207ENST00000491967 DBPQ10586 325 aaPredicted RBP7□□□□□ -1.29
SMARCB1-207ENST00000491967 TRAP1Q12931 704 aaKnown RBP7□□□□□ -1.29
SMARCB1-207ENST00000491967 TEX30Q5JUR7 227 aa7□□□□□ -1.29
SMARCB1-207ENST00000491967 CLEC12AQ5QGZ9 265 aa7□□□□□ -1.29
SMARCB1-207ENST00000491967 RPL13AP3Q6NVV1 102 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms