RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 PTPN20Q4JDL3 420 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 SLC35E4Q6ICL7 350 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 C8orf74Q6P047 294 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 EMBQ6PCB8 327 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 C12orf54Q6X4T0 127 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 TIPARPQ7Z3E1 657 aaKnown RBP2.53□□□□□ -2
DEPDC1-204ENST00000489862 MYPOPQ86VE0 399 aaPredicted RBP2.53□□□□□ -2
DEPDC1-204ENST00000489862 OR4K2Q8NGD2 314 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 OR4D10Q8NGI6 311 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 OR2Y1Q8NGV0 311 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 ACER1Q8TDN7 264 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 GTF3AQ92664 365 aaKnown RBP2.53□□□□□ -2
DEPDC1-204ENST00000489862 PSMG2Q969U7 264 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 NSMCE3Q96MG7 304 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 MCCC1Q96RQ3 725 aaPredicted RBP2.53□□□□□ -2
DEPDC1-204ENST00000489862 RBBP8Q99708 897 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 FOXC2Q99958 501 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 RARRES2Q99969 163 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 KLHDC3Q9BQ90 382 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 RNF126Q9BV68 326 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 VCX3BQ9H321 246 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 PPDPFQ9H3Y8 114 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 FOLH1BQ9HBA9 442 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 IFT46Q9NQC8 304 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 DEPPQ9NTK1 212 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 HRASLS2Q9NWW9 162 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 EHFQ9NZC4 300 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 L3MBTL1Q9Y468 752 aa2.53□□□□□ -2
DEPDC1-204ENST00000489862 TBL2Q9Y4P3 447 aaKnown RBP2.53□□□□□ -2
DEPDC1-204ENST00000489862 RANBP2P49792 3224 aaKnown RBP2.53□□□□□ -2.01
DEPDC1-204ENST00000489862 DDX60LQ5H9U9 1706 aaKnown RBP2.52□□□□□ -2.01
DEPDC1-204ENST00000489862 RAD50Q92878 1312 aa2.52□□□□□ -2.01
DEPDC1-204ENST00000489862 FOCADQ5VW36 1801 aa2.52□□□□□ -2.01
DEPDC1-204ENST00000489862 PHIPQ8WWQ0 1821 aa2.52□□□□□ -2.01
DEPDC1-204ENST00000489862 BAZ2AQ9UIF9 1905 aaKnown RBP2.52□□□□□ -2.01
DEPDC1-204ENST00000489862 TRAV8-7A0A075B6U6 113 aa2.52□□□□□ -2.01
DEPDC1-204ENST00000489862 IGKV6D-41A0A0C4DH26 115 aa2.52□□□□□ -2.01
DEPDC1-204ENST00000489862 TEX48A0A1B0GUV7 120 aa2.52□□□□□ -2.01
DEPDC1-204ENST00000489862 A0A1W2PRF3 423 aa2.52□□□□□ -2.01
DEPDC1-204ENST00000489862 A0A1W2PRM7 423 aa2.52□□□□□ -2.01
DEPDC1-204ENST00000489862 TMEM210A6NLX4 147 aa2.52□□□□□ -2.01
DEPDC1-204ENST00000489862 SULT1C2O00338 296 aa2.52□□□□□ -2.01
DEPDC1-204ENST00000489862 PRMT5O14744 637 aaPredicted RBP2.52□□□□□ -2.01
DEPDC1-204ENST00000489862 PTTG1O95997 202 aa2.52□□□□□ -2.01
DEPDC1-204ENST00000489862 SERPINA6P08185 405 aa2.52□□□□□ -2.01
DEPDC1-204ENST00000489862 FCGR3AP08637 254 aa2.52□□□□□ -2.01
DEPDC1-204ENST00000489862 CD3GP09693 182 aa2.52□□□□□ -2.01
DEPDC1-204ENST00000489862 LIPCP11150 499 aa2.52□□□□□ -2.01
DEPDC1-204ENST00000489862 ZNF250P15622 560 aa2.52□□□□□ -2.01
DEPDC1-204ENST00000489862 CALML3P27482 149 aa2.52□□□□□ -2.01
DEPDC1-204ENST00000489862 FCGR2CP31995 323 aa2.52□□□□□ -2.01
DEPDC1-204ENST00000489862 HMGCLP35914 325 aa2.52□□□□□ -2.01
DEPDC1-204ENST00000489862 MAGEA3P43357 314 aa2.52□□□□□ -2.01
DEPDC1-204ENST00000489862 RPL14P50914 215 aaKnown RBP2.52□□□□□ -2.01
DEPDC1-204ENST00000489862 PAX9P55771 341 aa2.52□□□□□ -2.01
DEPDC1-204ENST00000489862 OR10A3P58181 314 aa2.52□□□□□ -2.01
DEPDC1-204ENST00000489862 DSTNP60981 165 aa2.52□□□□□ -2.01
DEPDC1-204ENST00000489862 RND3P61587 244 aa2.52□□□□□ -2.01
DEPDC1-204ENST00000489862 DHODHQ02127 395 aa2.52□□□□□ -2.01
DEPDC1-204ENST00000489862 SLC25A11Q02978 314 aaKnown RBP2.52□□□□□ -2.01
DEPDC1-204ENST00000489862 CALCOCO2Q13137 446 aa2.52□□□□□ -2.01
DEPDC1-204ENST00000489862 DYNC1I2Q13409 638 aaKnown RBP2.52□□□□□ -2.01
DEPDC1-204ENST00000489862 ZNF726P1Q15940 193 aa2.52□□□□□ -2.01
DEPDC1-204ENST00000489862 C5orf64Q2M2E5 130 aa2.52□□□□□ -2.01
DEPDC1-204ENST00000489862 ACTBL2Q562R1 376 aa2.52□□□□□ -2.01
DEPDC1-204ENST00000489862 TIMM23BQ5SRD1 257 aa2.52□□□□□ -2.01
DEPDC1-204ENST00000489862 TPRG1LQ5T0D9 272 aa2.52□□□□□ -2.01
DEPDC1-204ENST00000489862 SPESP1Q6UW49 350 aa2.52□□□□□ -2.01
DEPDC1-204ENST00000489862 EPGNQ6UW88 154 aa2.52□□□□□ -2.01
DEPDC1-204ENST00000489862 CERS6Q6ZMG9 384 aa2.52□□□□□ -2.01
DEPDC1-204ENST00000489862 ZNF497Q6ZNH5 498 aa2.52□□□□□ -2.01
DEPDC1-204ENST00000489862 LHFPL3Q86UP9 236 aa2.52□□□□□ -2.01
DEPDC1-204ENST00000489862 MCOLN2Q8IZK6 566 aa2.52□□□□□ -2.01
DEPDC1-204ENST00000489862 ZNF786Q8N393 782 aa2.52□□□□□ -2.01
DEPDC1-204ENST00000489862 EID2Q8N6I1 236 aa2.52□□□□□ -2.01
DEPDC1-204ENST00000489862 SAMD12Q8N8I0 201 aa2.52□□□□□ -2.01
DEPDC1-204ENST00000489862 WDR31Q8NA23 367 aa2.52□□□□□ -2.01
DEPDC1-204ENST00000489862 OR5AP2Q8NGF4 316 aa2.52□□□□□ -2.01
DEPDC1-204ENST00000489862 CRYGNQ8WXF5 182 aa2.52□□□□□ -2.01
DEPDC1-204ENST00000489862 OPTNQ96CV9 577 aa2.52□□□□□ -2.01
DEPDC1-204ENST00000489862 CHMP6Q96FZ7 201 aa2.52□□□□□ -2.01
DEPDC1-204ENST00000489862 TMEM80Q96HE8 168 aa2.52□□□□□ -2.01
DEPDC1-204ENST00000489862 B3GALT6Q96L58 329 aa2.52□□□□□ -2.01
DEPDC1-204ENST00000489862 ZFP3Q96NJ6 502 aa2.52□□□□□ -2.01
DEPDC1-204ENST00000489862 ZNF300Q96RE9 604 aaPredicted RBP2.52□□□□□ -2.01
DEPDC1-204ENST00000489862 ACTR6Q9GZN1 396 aa2.52□□□□□ -2.01
DEPDC1-204ENST00000489862 DRC3Q9H069 523 aa2.52□□□□□ -2.01
DEPDC1-204ENST00000489862 CAB39LQ9H9S4 337 aa2.52□□□□□ -2.01
DEPDC1-204ENST00000489862 LNPEPQ9UIQ6 1025 aa2.52□□□□□ -2.01
DEPDC1-204ENST00000489862 UBQLN1Q9UMX0 589 aaKnown RBP2.52□□□□□ -2.01
DEPDC1-204ENST00000489862 CSNK1G3Q9Y6M4 447 aa2.52□□□□□ -2.01
DEPDC1-204ENST00000489862 CASP8AP2Q9UKL3 1982 aa2.51□□□□□ -2.01
DEPDC1-204ENST00000489862 THSD7BQ9C0I4 1608 aa2.51□□□□□ -2.01
DEPDC1-204ENST00000489862 A0A0A6YYD5 115 aa2.51□□□□□ -2.01
DEPDC1-204ENST00000489862 A0A0G2JLM5 398 aa2.51□□□□□ -2.01
DEPDC1-204ENST00000489862 A0A0G2JRQ6 117 aa2.51□□□□□ -2.01
DEPDC1-204ENST00000489862 GLYATL1P3A0A0U1RQE8 302 aa2.51□□□□□ -2.01
DEPDC1-204ENST00000489862 SMIM28A0A1B0GU29 152 aa2.51□□□□□ -2.01
DEPDC1-204ENST00000489862 A0A1W2PNU3 283 aaPredicted RBP2.51□□□□□ -2.01
DEPDC1-204ENST00000489862 TSPAN11A1L157 253 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms