RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 NKIRAS2Q9NYR9 191 aa9.5□□□□□ -0.89
CPSF7-212ENST00000489728 WARS2Q9UGM6 360 aaKnown RBP9.5□□□□□ -0.89
CPSF7-212ENST00000489728 DUSP13Q9UII6 198 aa9.5□□□□□ -0.89
CPSF7-212ENST00000489728 GRIP1Q9Y3R0 1128 aa9.5□□□□□ -0.89
CPSF7-212ENST00000489728 CELSR1Q9NYQ6 3014 aa9.5□□□□□ -0.89
CPSF7-212ENST00000489728 PLSCR5A0PG75 271 aa9.49□□□□□ -0.89
CPSF7-212ENST00000489728 NDUFS8O00217 210 aa9.49□□□□□ -0.89
CPSF7-212ENST00000489728 PHYHO14832 338 aa9.49□□□□□ -0.89
CPSF7-212ENST00000489728 CASQ2O14958 399 aaPredicted RBP9.49□□□□□ -0.89
CPSF7-212ENST00000489728 SELENOFO60613 162 aa9.49□□□□□ -0.89
CPSF7-212ENST00000489728 NGFP01138 241 aa9.49□□□□□ -0.89
CPSF7-212ENST00000489728 LYNP07948 512 aa9.49□□□□□ -0.89
CPSF7-212ENST00000489728 ADH4P08319 380 aa9.49□□□□□ -0.89
CPSF7-212ENST00000489728 DBHP09172 617 aa9.49□□□□□ -0.89
CPSF7-212ENST00000489728 PSKH1P11801 424 aa9.49□□□□□ -0.89
CPSF7-212ENST00000489728 RAC2P15153 192 aa9.49□□□□□ -0.89
CPSF7-212ENST00000489728 FOSL1P15407 271 aa9.49□□□□□ -0.89
CPSF7-212ENST00000489728 KITLGP21583 273 aa9.49□□□□□ -0.89
CPSF7-212ENST00000489728 HTR1FP30939 366 aa9.49□□□□□ -0.89
CPSF7-212ENST00000489728 POLR2IP36954 125 aaKnown RBP9.49□□□□□ -0.89
CPSF7-212ENST00000489728 OPRL1P41146 370 aa9.49□□□□□ -0.89
CPSF7-212ENST00000489728 ERVS71-1P61550 626 aa9.49□□□□□ -0.89
CPSF7-212ENST00000489728 SNRPGP62308 76 aaKnown RBP9.49□□□□□ -0.89
CPSF7-212ENST00000489728 ELF3P78545 371 aaPredicted RBP9.49□□□□□ -0.89
CPSF7-212ENST00000489728 MRPS11P82912 194 aaKnown RBP9.49□□□□□ -0.89
CPSF7-212ENST00000489728 DBPQ10586 325 aaPredicted RBP9.49□□□□□ -0.89
CPSF7-212ENST00000489728 TAF13Q15543 124 aa9.49□□□□□ -0.89
CPSF7-212ENST00000489728 TRIP10Q15642 601 aa9.49□□□□□ -0.89
CPSF7-212ENST00000489728 NKPD1Q17RQ9 610 aa9.49□□□□□ -0.89
CPSF7-212ENST00000489728 MEDAGQ5VYS4 303 aa9.49□□□□□ -0.89
CPSF7-212ENST00000489728 TMEM154Q6P9G4 183 aa9.49□□□□□ -0.89
CPSF7-212ENST00000489728 FAM81AQ8TBF8 368 aa9.49□□□□□ -0.89
CPSF7-212ENST00000489728 SLC25A40Q8TBP6 338 aa9.49□□□□□ -0.89
CPSF7-212ENST00000489728 HAVCR1Q96D42 359 aa9.49□□□□□ -0.89
CPSF7-212ENST00000489728 SORCS2Q96PQ0 1159 aa9.49□□□□□ -0.89
CPSF7-212ENST00000489728 DIRC2Q96SL1 478 aa9.49□□□□□ -0.89
CPSF7-212ENST00000489728 MBOAT4Q96T53 435 aa9.49□□□□□ -0.89
CPSF7-212ENST00000489728 CNN2Q99439 309 aaKnown RBP9.49□□□□□ -0.89
CPSF7-212ENST00000489728 SLC29A1Q99808 456 aa9.49□□□□□ -0.89
CPSF7-212ENST00000489728 OR51B6Q9H340 312 aa9.49□□□□□ -0.89
CPSF7-212ENST00000489728 SMPD3Q9NY59 655 aaPredicted RBP9.49□□□□□ -0.89
CPSF7-212ENST00000489728 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.49□□□□□ -0.89
CPSF7-212ENST00000489728 USF3Q68DE3 2245 aa9.49□□□□□ -0.89
CPSF7-212ENST00000489728 ERICH4A6NGS2 130 aa9.48□□□□□ -0.89
CPSF7-212ENST00000489728 SNTNA6NMZ2 147 aa9.48□□□□□ -0.89
CPSF7-212ENST00000489728 ANKRD65E5RJM6 399 aa9.48□□□□□ -0.89
CPSF7-212ENST00000489728 F5H5K5 113 aa9.48□□□□□ -0.89
CPSF7-212ENST00000489728 SLC16A6O15403 523 aa9.48□□□□□ -0.89
CPSF7-212ENST00000489728 ZNF254O75437 659 aa9.48□□□□□ -0.89
CPSF7-212ENST00000489728 ADRA2AP08913 450 aa9.48□□□□□ -0.89
CPSF7-212ENST00000489728 SELEP16581 610 aa9.48□□□□□ -0.89
CPSF7-212ENST00000489728 ALOX5APP20292 161 aa9.48□□□□□ -0.89
CPSF7-212ENST00000489728 DCTDP32321 178 aa9.48□□□□□ -0.89
CPSF7-212ENST00000489728 MPV17P39210 176 aa9.48□□□□□ -0.89
CPSF7-212ENST00000489728 RPS27P42677 84 aaKnown RBP9.48□□□□□ -0.89
CPSF7-212ENST00000489728 MMP15P51511 669 aa9.48□□□□□ -0.89
CPSF7-212ENST00000489728 ROM1Q03395 351 aa9.48□□□□□ -0.89
CPSF7-212ENST00000489728 MALLQ13021 153 aa9.48□□□□□ -0.89
CPSF7-212ENST00000489728 OCLNQ16625 522 aa9.48□□□□□ -0.89
CPSF7-212ENST00000489728 CLEC12BQ2HXU8 276 aa9.48□□□□□ -0.89
CPSF7-212ENST00000489728 KCTD18Q6PI47 426 aaPredicted RBP9.48□□□□□ -0.89
CPSF7-212ENST00000489728 CLEC2AQ6UVW9 174 aa9.48□□□□□ -0.89
CPSF7-212ENST00000489728 LRP11Q86VZ4 500 aa9.48□□□□□ -0.89
CPSF7-212ENST00000489728 WFDC11Q8NEX6 87 aa9.48□□□□□ -0.89
CPSF7-212ENST00000489728 OR52H1Q8NGJ2 320 aa9.48□□□□□ -0.89
CPSF7-212ENST00000489728 SLC7A6Q92536 515 aa9.48□□□□□ -0.89
CPSF7-212ENST00000489728 ITFG2Q969R8 447 aa9.48□□□□□ -0.89
CPSF7-212ENST00000489728 IL4I1Q96RQ9 567 aa9.48□□□□□ -0.89
CPSF7-212ENST00000489728 VRK1Q99986 396 aaPredicted RBP9.48□□□□□ -0.89
CPSF7-212ENST00000489728 VCXQ9H320 206 aa9.48□□□□□ -0.89
CPSF7-212ENST00000489728 TAAR3PQ9P1P4 343 aa9.48□□□□□ -0.89
CPSF7-212ENST00000489728 MYEF2Q9P2K5 600 aaKnown RBP9.48□□□□□ -0.89
CPSF7-212ENST00000489728 LAMP5Q9UJQ1 280 aa9.48□□□□□ -0.89
CPSF7-212ENST00000489728 ZDHHC8Q9ULC8 765 aa9.48□□□□□ -0.89
CPSF7-212ENST00000489728 STARD10Q9Y365 291 aa9.48□□□□□ -0.89
CPSF7-212ENST00000489728 GMPPBQ9Y5P6 360 aa9.48□□□□□ -0.89
CPSF7-212ENST00000489728 ITPR3Q14573 2671 aa9.48□□□□□ -0.89
CPSF7-212ENST00000489728 LOC100130705A0A1B0GUX0 176 aa9.47□□□□□ -0.89
CPSF7-212ENST00000489728 ACOD1A6NK06 481 aa9.47□□□□□ -0.89
CPSF7-212ENST00000489728 C17orf100A8MU93 164 aa9.47□□□□□ -0.89
CPSF7-212ENST00000489728 M0R129 80 aa9.47□□□□□ -0.89
CPSF7-212ENST00000489728 XRCC2O43543 280 aa9.47□□□□□ -0.89
CPSF7-212ENST00000489728 TIMM8AO60220 97 aaPredicted RBP9.47□□□□□ -0.89
CPSF7-212ENST00000489728 CLPTM1O96005 669 aa9.47□□□□□ -0.89
CPSF7-212ENST00000489728 LCATP04180 440 aa9.47□□□□□ -0.89
CPSF7-212ENST00000489728 H2BFMP0C1H6 154 aa9.47□□□□□ -0.89
CPSF7-212ENST00000489728 CFL1P23528 166 aaKnown RBP9.47□□□□□ -0.89
CPSF7-212ENST00000489728 HSD11B1P28845 292 aa9.47□□□□□ -0.89
CPSF7-212ENST00000489728 NAA10P41227 235 aaPredicted RBP9.47□□□□□ -0.89
CPSF7-212ENST00000489728 ALDH3B1P43353 468 aa9.47□□□□□ -0.89
CPSF7-212ENST00000489728 SLC6A9P48067 706 aa9.47□□□□□ -0.89
CPSF7-212ENST00000489728 PSG7Q13046 419 aa9.47□□□□□ -0.89
CPSF7-212ENST00000489728 SPATA46Q5T0L3 261 aa9.47□□□□□ -0.89
CPSF7-212ENST00000489728 OGFRL1Q5TC84 451 aaPredicted RBP9.47□□□□□ -0.89
CPSF7-212ENST00000489728 ZNF555Q8NEP9 628 aa9.47□□□□□ -0.89
CPSF7-212ENST00000489728 THEM6Q8WUY1 208 aa9.47□□□□□ -0.89
CPSF7-212ENST00000489728 Q96MF0 132 aa9.47□□□□□ -0.89
CPSF7-212ENST00000489728 ZNF582Q96NG8 517 aaPredicted RBP9.47□□□□□ -0.89
CPSF7-212ENST00000489728 APOL4Q9BPW4 351 aa9.47□□□□□ -0.89
CPSF7-212ENST00000489728 RHNO1Q9BSD3 238 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms