RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 TACSTD2P09758 323 aa12.17□□□□□ -0.46
BRCA1-218ENST00000489037 SELEP16581 610 aa12.17□□□□□ -0.46
BRCA1-218ENST00000489037 HOXB4P17483 251 aaPredicted RBP12.17□□□□□ -0.46
BRCA1-218ENST00000489037 KITLGP21583 273 aa12.17□□□□□ -0.46
BRCA1-218ENST00000489037 CRYBB2P43320 205 aa12.17□□□□□ -0.46
BRCA1-218ENST00000489037 SLC6A9P48067 706 aa12.17□□□□□ -0.46
BRCA1-218ENST00000489037 KRTAP1-1Q07627 177 aa12.17□□□□□ -0.46
BRCA1-218ENST00000489037 ATP6AP1Q15904 470 aa12.17□□□□□ -0.46
BRCA1-218ENST00000489037 HFEQ30201 348 aa12.17□□□□□ -0.46
BRCA1-218ENST00000489037 USP51Q70EK9 711 aa12.17□□□□□ -0.46
BRCA1-218ENST00000489037 DCXRQ7Z4W1 244 aa12.17□□□□□ -0.46
BRCA1-218ENST00000489037 ZDHHC13Q8IUH4 622 aa12.17□□□□□ -0.46
BRCA1-218ENST00000489037 ZNF511Q8NB15 262 aa12.17□□□□□ -0.46
BRCA1-218ENST00000489037 HPS1Q92902 700 aa12.17□□□□□ -0.46
BRCA1-218ENST00000489037 UTP4Q969X6 686 aaKnown RBP12.17□□□□□ -0.46
BRCA1-218ENST00000489037 TIMD4Q96H15 378 aa12.17□□□□□ -0.46
BRCA1-218ENST00000489037 POM121Q96HA1 1249 aa12.17□□□□□ -0.46
BRCA1-218ENST00000489037 COPS4Q9BT78 406 aa12.17□□□□□ -0.46
BRCA1-218ENST00000489037 PRRG3Q9BZD7 231 aa12.17□□□□□ -0.46
BRCA1-218ENST00000489037 OR51V1Q9H2C8 321 aa12.17□□□□□ -0.46
BRCA1-218ENST00000489037 WDR76Q9H967 626 aa12.17□□□□□ -0.46
BRCA1-218ENST00000489037 NTN4Q9HB63 628 aa12.17□□□□□ -0.46
BRCA1-218ENST00000489037 ZNF275Q9NSD4 429 aaPredicted RBP12.17□□□□□ -0.46
BRCA1-218ENST00000489037 CENPMQ9NSP4 180 aa12.17□□□□□ -0.46
BRCA1-218ENST00000489037 FAM183AA6NL82 134 aa12.16□□□□□ -0.46
BRCA1-218ENST00000489037 M0R135 149 aa12.16□□□□□ -0.46
BRCA1-218ENST00000489037 GLCEO94923 617 aa12.16□□□□□ -0.46
BRCA1-218ENST00000489037 ADH4P08319 380 aa12.16□□□□□ -0.46
BRCA1-218ENST00000489037 ACSM4P0C7M7 580 aa12.16□□□□□ -0.46
BRCA1-218ENST00000489037 IGHV4-31P0DP07 118 aa12.16□□□□□ -0.46
BRCA1-218ENST00000489037 CLUP10909 449 aa12.16□□□□□ -0.46
BRCA1-218ENST00000489037 GSTT1P30711 240 aa12.16□□□□□ -0.46
BRCA1-218ENST00000489037 RPS27P42677 84 aaKnown RBP12.16□□□□□ -0.46
BRCA1-218ENST00000489037 SLC15A1P46059 708 aa12.16□□□□□ -0.46
BRCA1-218ENST00000489037 CRISP1P54107 249 aa12.16□□□□□ -0.46
BRCA1-218ENST00000489037 TNFAIP6P98066 277 aaPredicted RBP12.16□□□□□ -0.46
BRCA1-218ENST00000489037 CDK5Q00535 292 aa12.16□□□□□ -0.46
BRCA1-218ENST00000489037 SLC3A1Q07837 685 aa12.16□□□□□ -0.46
BRCA1-218ENST00000489037 CCNIQ14094 377 aa12.16□□□□□ -0.46
BRCA1-218ENST00000489037 TEX30Q5JUR7 227 aa12.16□□□□□ -0.46
BRCA1-218ENST00000489037 C6orf52Q5T4I8 152 aa12.16□□□□□ -0.46
BRCA1-218ENST00000489037 ACSM5Q6NUN0 579 aa12.16□□□□□ -0.46
BRCA1-218ENST00000489037 FBXW12Q6X9E4 464 aa12.16□□□□□ -0.46
BRCA1-218ENST00000489037 SHFQ7M4L6 423 aa12.16□□□□□ -0.46
BRCA1-218ENST00000489037 PEG10Q86TG7 708 aaKnown RBP12.16□□□□□ -0.46
BRCA1-218ENST00000489037 ERI1Q8IV48 349 aaKnown RBP12.16□□□□□ -0.46
BRCA1-218ENST00000489037 C10orf67Q8IYJ2 551 aa12.16□□□□□ -0.46
BRCA1-218ENST00000489037 OR6N2Q8NGY6 317 aa12.16□□□□□ -0.46
BRCA1-218ENST00000489037 ZNRF4Q8WWF5 429 aa12.16□□□□□ -0.46
BRCA1-218ENST00000489037 GTF3AQ92664 365 aaKnown RBP12.16□□□□□ -0.46
BRCA1-218ENST00000489037 YIPF5Q969M3 257 aa12.16□□□□□ -0.46
BRCA1-218ENST00000489037 DUS3LQ96G46 650 aaKnown RBP12.16□□□□□ -0.46
BRCA1-218ENST00000489037 ZNF799Q96GE5 643 aa12.16□□□□□ -0.46
BRCA1-218ENST00000489037 MAP6Q96JE9 813 aa12.16□□□□□ -0.46
BRCA1-218ENST00000489037 ZNF582Q96NG8 517 aaPredicted RBP12.16□□□□□ -0.46
BRCA1-218ENST00000489037 INTS14Q96SY0 518 aa12.16□□□□□ -0.46
BRCA1-218ENST00000489037 C1QTNF5Q9BXJ0 243 aa12.16□□□□□ -0.46
BRCA1-218ENST00000489037 POFUT1Q9H488 388 aa12.16□□□□□ -0.46
BRCA1-218ENST00000489037 MED20Q9H944 212 aa12.16□□□□□ -0.46
BRCA1-218ENST00000489037 SLC25A19Q9HC21 320 aa12.16□□□□□ -0.46
BRCA1-218ENST00000489037 MSL2Q9HCI7 577 aa12.16□□□□□ -0.46
BRCA1-218ENST00000489037 KRT84Q9NSB2 600 aa12.16□□□□□ -0.46
BRCA1-218ENST00000489037 ENOPH1Q9UHY7 261 aa12.16□□□□□ -0.46
BRCA1-218ENST00000489037 LOC100289279A0A1B0GTE1 492 aa12.15□□□□□ -0.46
BRCA1-218ENST00000489037 LRP5LA4QPB2 252 aa12.15□□□□□ -0.46
BRCA1-218ENST00000489037 ZSCAN5BA6NJL1 495 aa12.15□□□□□ -0.46
BRCA1-218ENST00000489037 CLDN25C9JDP6 229 aa12.15□□□□□ -0.46
BRCA1-218ENST00000489037 ZNF878C9JN71 531 aa12.15□□□□□ -0.46
BRCA1-218ENST00000489037 LILRA1O75019 489 aa12.15□□□□□ -0.46
BRCA1-218ENST00000489037 ZNF16P17020 682 aaPredicted RBP12.15□□□□□ -0.46
BRCA1-218ENST00000489037 TNFRSF1AP19438 455 aa12.15□□□□□ -0.46
BRCA1-218ENST00000489037 RPS7P62081 194 aaKnown RBP12.15□□□□□ -0.46
BRCA1-218ENST00000489037 ESRRGP62508 458 aa12.15□□□□□ -0.46
BRCA1-218ENST00000489037 CDK5R2Q13319 367 aa12.15□□□□□ -0.46
BRCA1-218ENST00000489037 EIF2B1Q14232 305 aaKnown RBP12.15□□□□□ -0.46
BRCA1-218ENST00000489037 SNAPC1Q16533 368 aa12.15□□□□□ -0.46
BRCA1-218ENST00000489037 KLHL12Q53G59 568 aa12.15□□□□□ -0.46
BRCA1-218ENST00000489037 FAM166AQ6J272 317 aa12.15□□□□□ -0.46
BRCA1-218ENST00000489037 PLBD1Q6P4A8 553 aa12.15□□□□□ -0.46
BRCA1-218ENST00000489037 FAHD1Q6P587 224 aa12.15□□□□□ -0.46
BRCA1-218ENST00000489037 LYPD4Q6UWN0 246 aa12.15□□□□□ -0.46
BRCA1-218ENST00000489037 DRAM2Q6UX65 266 aa12.15□□□□□ -0.46
BRCA1-218ENST00000489037 ASRGL1Q7L266 308 aa12.15□□□□□ -0.46
BRCA1-218ENST00000489037 AMIGO2Q86SJ2 522 aa12.15□□□□□ -0.46
BRCA1-218ENST00000489037 PARP8Q8N3A8 854 aa12.15□□□□□ -0.46
BRCA1-218ENST00000489037 OR2Z1Q8NG97 314 aa12.15□□□□□ -0.46
BRCA1-218ENST00000489037 CCL17Q92583 94 aa12.15□□□□□ -0.46
BRCA1-218ENST00000489037 RAB1CQ92928 201 aa12.15□□□□□ -0.46
BRCA1-218ENST00000489037 SLAMF6Q96DU3 332 aa12.15□□□□□ -0.46
BRCA1-218ENST00000489037 SP140LQ9H930 580 aa12.15□□□□□ -0.46
BRCA1-218ENST00000489037 PNRC2Q9NPJ4 139 aaKnown RBP12.15□□□□□ -0.46
BRCA1-218ENST00000489037 DDX28Q9NUL7 540 aaKnown RBP12.15□□□□□ -0.46
BRCA1-218ENST00000489037 TVP23BQ9NYZ1 205 aa12.15□□□□□ -0.46
BRCA1-218ENST00000489037 KCNS2Q9ULS6 477 aa12.15□□□□□ -0.46
BRCA1-218ENST00000489037 TANC2Q9HCD6 1990 aa12.14□□□□□ -0.47
BRCA1-218ENST00000489037 PRODHO43272 600 aa12.14□□□□□ -0.47
BRCA1-218ENST00000489037 LMX1BO60663 402 aa12.14□□□□□ -0.47
BRCA1-218ENST00000489037 CRLF1O75462 422 aa12.14□□□□□ -0.47
BRCA1-218ENST00000489037 TGFAP01135 160 aa12.14□□□□□ -0.47
BRCA1-218ENST00000489037 APOC1P02654 83 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms