RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 OTX1P32242 354 aaPredicted RBP13.55□□□□□ -0.24
CTDSP1-209ENST00000488627 GZMKP49863 264 aa13.55□□□□□ -0.24
CTDSP1-209ENST00000488627 DAPP51397 102 aa13.55□□□□□ -0.24
CTDSP1-209ENST00000488627 CDK5R2Q13319 367 aa13.55□□□□□ -0.24
CTDSP1-209ENST00000488627 HLXQ14774 488 aaPredicted RBP13.55□□□□□ -0.24
CTDSP1-209ENST00000488627 TSTQ16762 297 aaKnown RBP13.55□□□□□ -0.24
CTDSP1-209ENST00000488627 FBXW12Q6X9E4 464 aa13.55□□□□□ -0.24
CTDSP1-209ENST00000488627 APOBEC3DQ96AK3 386 aaPredicted RBP13.55□□□□□ -0.24
CTDSP1-209ENST00000488627 MSI2Q96DH6 328 aaKnown RBP13.55□□□□□ -0.24
CTDSP1-209ENST00000488627 DDX28Q9NUL7 540 aaKnown RBP13.55□□□□□ -0.24
CTDSP1-209ENST00000488627 AP4S1Q9Y587 144 aa13.55□□□□□ -0.24
CTDSP1-209ENST00000488627 CACNG2Q9Y698 323 aa13.55□□□□□ -0.24
CTDSP1-209ENST00000488627 PLSCR5A0PG75 271 aa13.54□□□□□ -0.24
CTDSP1-209ENST00000488627 A8MV72 311 aaPredicted RBP13.54□□□□□ -0.24
CTDSP1-209ENST00000488627 ZNF593O00488 134 aaPredicted RBP13.54□□□□□ -0.24
CTDSP1-209ENST00000488627 SURF4O15260 269 aa13.54□□□□□ -0.24
CTDSP1-209ENST00000488627 TIMM8AO60220 97 aaPredicted RBP13.54□□□□□ -0.24
CTDSP1-209ENST00000488627 CDC14BO60729 498 aa13.54□□□□□ -0.24
CTDSP1-209ENST00000488627 CD55P08174 381 aa13.54□□□□□ -0.24
CTDSP1-209ENST00000488627 ANOS1P23352 680 aa13.54□□□□□ -0.24
CTDSP1-209ENST00000488627 ENTPD1P49961 510 aa13.54□□□□□ -0.24
CTDSP1-209ENST00000488627 PPP2R2BQ00005 443 aa13.54□□□□□ -0.24
CTDSP1-209ENST00000488627 TMEM236Q5W0B7 351 aa13.54□□□□□ -0.24
CTDSP1-209ENST00000488627 USP51Q70EK9 711 aa13.54□□□□□ -0.24
CTDSP1-209ENST00000488627 DCXRQ7Z4W1 244 aa13.54□□□□□ -0.24
CTDSP1-209ENST00000488627 ATG16L2Q8NAA4 619 aa13.54□□□□□ -0.24
CTDSP1-209ENST00000488627 OR5K1Q8NHB7 308 aa13.54□□□□□ -0.24
CTDSP1-209ENST00000488627 C1orf159Q96HA4 380 aa13.54□□□□□ -0.24
CTDSP1-209ENST00000488627 MARCH7Q9H992 704 aa13.54□□□□□ -0.24
CTDSP1-209ENST00000488627 DECR2Q9NUI1 292 aa13.54□□□□□ -0.24
CTDSP1-209ENST00000488627 PTTG3PQ9NZH4 202 aa13.54□□□□□ -0.24
CTDSP1-209ENST00000488627 ZDHHC8Q9ULC8 765 aa13.54□□□□□ -0.24
CTDSP1-209ENST00000488627 IGHV1-69-2A0A0G2JMI3 117 aa13.53□□□□□ -0.24
CTDSP1-209ENST00000488627 HMGN1P05114 100 aa13.53□□□□□ -0.24
CTDSP1-209ENST00000488627 GPR6P46095 362 aaPredicted RBP13.53□□□□□ -0.24
CTDSP1-209ENST00000488627 CHN2P52757 468 aa13.53□□□□□ -0.24
CTDSP1-209ENST00000488627 BLVRAP53004 296 aa13.53□□□□□ -0.24
CTDSP1-209ENST00000488627 HIPK1Q86Z02 1210 aa13.53□□□□□ -0.24
CTDSP1-209ENST00000488627 PARP8Q8N3A8 854 aa13.53□□□□□ -0.24
CTDSP1-209ENST00000488627 OR5L1Q8NGL2 311 aa13.53□□□□□ -0.24
CTDSP1-209ENST00000488627 OR6K6Q8NGW6 343 aa13.53□□□□□ -0.24
CTDSP1-209ENST00000488627 ST7LQ8TDW4 575 aa13.53□□□□□ -0.24
CTDSP1-209ENST00000488627 DNAJC9Q8WXX5 260 aa13.53□□□□□ -0.24
CTDSP1-209ENST00000488627 HPS1Q92902 700 aa13.53□□□□□ -0.24
CTDSP1-209ENST00000488627 SAP30LQ9HAJ7 183 aa13.53□□□□□ -0.24
CTDSP1-209ENST00000488627 SLC25A19Q9HC21 320 aa13.53□□□□□ -0.24
CTDSP1-209ENST00000488627 PAPOLBQ9NRJ5 636 aaKnown RBP13.53□□□□□ -0.24
CTDSP1-209ENST00000488627 JMJD1CQ15652 2540 aa13.53□□□□□ -0.24
CTDSP1-209ENST00000488627 C5orf63A6NC05 138 aa13.52□□□□□ -0.25
CTDSP1-209ENST00000488627 M0R135 149 aa13.52□□□□□ -0.25
CTDSP1-209ENST00000488627 PPIHO43447 177 aaKnown RBP13.52□□□□□ -0.25
CTDSP1-209ENST00000488627 GLCEO94923 617 aa13.52□□□□□ -0.25
CTDSP1-209ENST00000488627 SPARCP09486 303 aa13.52□□□□□ -0.25
CTDSP1-209ENST00000488627 ZNF16P17020 682 aaPredicted RBP13.52□□□□□ -0.25
CTDSP1-209ENST00000488627 FASP25445 335 aa13.52□□□□□ -0.25
CTDSP1-209ENST00000488627 CRISP1P54107 249 aa13.52□□□□□ -0.25
CTDSP1-209ENST00000488627 ZMAT1Q5H9K5 638 aa13.52□□□□□ -0.25
CTDSP1-209ENST00000488627 OR2T2Q6IF00 324 aa13.52□□□□□ -0.25
CTDSP1-209ENST00000488627 PLBD1Q6P4A8 553 aa13.52□□□□□ -0.25
CTDSP1-209ENST00000488627 AMIGO2Q86SJ2 522 aa13.52□□□□□ -0.25
CTDSP1-209ENST00000488627 PRIMA1Q86XR5 153 aa13.52□□□□□ -0.25
CTDSP1-209ENST00000488627 TIGD4Q8IY51 512 aa13.52□□□□□ -0.25
CTDSP1-209ENST00000488627 LRTOMTQ8WZ04 291 aa13.52□□□□□ -0.25
CTDSP1-209ENST00000488627 ZNF799Q96GE5 643 aa13.52□□□□□ -0.25
CTDSP1-209ENST00000488627 DIRC2Q96SL1 478 aa13.52□□□□□ -0.25
CTDSP1-209ENST00000488627 OR51V1Q9H2C8 321 aa13.52□□□□□ -0.25
CTDSP1-209ENST00000488627 ABCA2Q9BZC7 2435 aa13.51□□□□□ -0.25
CTDSP1-209ENST00000488627 CHD3Q12873 2000 aaKnown RBP13.51□□□□□ -0.25
CTDSP1-209ENST00000488627 YLPM1P49750 1951 aaKnown RBP13.51□□□□□ -0.25
CTDSP1-209ENST00000488627 LOC100289279A0A1B0GTE1 492 aa13.51□□□□□ -0.25
CTDSP1-209ENST00000488627 A0A1B0GWJ7 208 aa13.51□□□□□ -0.25
CTDSP1-209ENST00000488627 G3V2T6 193 aa13.51□□□□□ -0.25
CTDSP1-209ENST00000488627 TPD52L2O43399 206 aaKnown RBP13.51□□□□□ -0.25
CTDSP1-209ENST00000488627 MITFO75030 526 aaPredicted RBP13.51□□□□□ -0.25
CTDSP1-209ENST00000488627 LCATP04180 440 aa13.51□□□□□ -0.25
CTDSP1-209ENST00000488627 EPHA2P29317 976 aa13.51□□□□□ -0.25
CTDSP1-209ENST00000488627 GSTT1P30711 240 aa13.51□□□□□ -0.25
CTDSP1-209ENST00000488627 RBMXP38159 391 aaKnown RBP13.51□□□□□ -0.25
CTDSP1-209ENST00000488627 TPTEP56180 551 aa13.51□□□□□ -0.25
CTDSP1-209ENST00000488627 LMO4P61968 165 aa13.51□□□□□ -0.25
CTDSP1-209ENST00000488627 TNFAIP6P98066 277 aaPredicted RBP13.51□□□□□ -0.25
CTDSP1-209ENST00000488627 HNRNPA0Q13151 305 aaKnown RBP13.51□□□□□ -0.25
CTDSP1-209ENST00000488627 GK2Q14410 553 aaPredicted RBP13.51□□□□□ -0.25
CTDSP1-209ENST00000488627 KDM4DQ6B0I6 523 aa13.51□□□□□ -0.25
CTDSP1-209ENST00000488627 DPY19L4Q7Z388 723 aa13.51□□□□□ -0.25
CTDSP1-209ENST00000488627 CPOQ8IVL8 374 aa13.51□□□□□ -0.25
CTDSP1-209ENST00000488627 OR5AS1Q8N127 324 aa13.51□□□□□ -0.25
CTDSP1-209ENST00000488627 BBS1Q8NFJ9 593 aa13.51□□□□□ -0.25
CTDSP1-209ENST00000488627 OR8G5Q8NG78 346 aa13.51□□□□□ -0.25
CTDSP1-209ENST00000488627 CLDND2Q8NHS1 167 aa13.51□□□□□ -0.25
CTDSP1-209ENST00000488627 SPTSSAQ969W0 71 aa13.51□□□□□ -0.25
CTDSP1-209ENST00000488627 SLAMF6Q96DU3 332 aa13.51□□□□□ -0.25
CTDSP1-209ENST00000488627 ELMOD3Q96FG2 381 aa13.51□□□□□ -0.25
CTDSP1-209ENST00000488627 TMEM160Q9NX00 188 aa13.51□□□□□ -0.25
CTDSP1-209ENST00000488627 IQCF6A8MYZ5 107 aa13.5□□□□□ -0.25
CTDSP1-209ENST00000488627 PRR23D1E9PI22 279 aaPredicted RBP13.5□□□□□ -0.25
CTDSP1-209ENST00000488627 LMX1BO60663 402 aa13.5□□□□□ -0.25
CTDSP1-209ENST00000488627 PRR23D2P0DMB1 279 aaPredicted RBP13.5□□□□□ -0.25
CTDSP1-209ENST00000488627 PAICSP22234 425 aaKnown RBP13.5□□□□□ -0.25
CTDSP1-209ENST00000488627 SLC2A5P22732 501 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms