RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 RIBC2Q9H4K1 309 aa12.88□□□□□ -0.35
CXCL12-207ENST00000488591 DDX28Q9NUL7 540 aaKnown RBP12.88□□□□□ -0.35
CXCL12-207ENST00000488591 IGHV4-30-2A0A087WSY4 118 aa12.87□□□□□ -0.35
CXCL12-207ENST00000488591 ZNF878C9JN71 531 aa12.87□□□□□ -0.35
CXCL12-207ENST00000488591 TPD52L2O43399 206 aaKnown RBP12.87□□□□□ -0.35
CXCL12-207ENST00000488591 TLX2O43763 284 aaPredicted RBP12.87□□□□□ -0.35
CXCL12-207ENST00000488591 BAG2O95816 211 aa12.87□□□□□ -0.35
CXCL12-207ENST00000488591 LCATP04180 440 aa12.87□□□□□ -0.35
CXCL12-207ENST00000488591 RAC2P15153 192 aa12.87□□□□□ -0.35
CXCL12-207ENST00000488591 SLC6A9P48067 706 aa12.87□□□□□ -0.35
CXCL12-207ENST00000488591 RAD23AP54725 363 aa12.87□□□□□ -0.35
CXCL12-207ENST00000488591 GRB2P62993 217 aaKnown RBP12.87□□□□□ -0.35
CXCL12-207ENST00000488591 MALLQ13021 153 aa12.87□□□□□ -0.35
CXCL12-207ENST00000488591 PSG7Q13046 419 aa12.87□□□□□ -0.35
CXCL12-207ENST00000488591 APOFQ13790 326 aa12.87□□□□□ -0.35
CXCL12-207ENST00000488591 ZSCAN26Q16670 478 aa12.87□□□□□ -0.35
CXCL12-207ENST00000488591 RSPO1Q2MKA7 263 aaPredicted RBP12.87□□□□□ -0.35
CXCL12-207ENST00000488591 KRTAP27-1Q3LI81 207 aa12.87□□□□□ -0.35
CXCL12-207ENST00000488591 C12orf73Q69YU5 71 aa12.87□□□□□ -0.35
CXCL12-207ENST00000488591 DPY19L4Q7Z388 723 aa12.87□□□□□ -0.35
CXCL12-207ENST00000488591 CIARTQ8N365 385 aaPredicted RBP12.87□□□□□ -0.35
CXCL12-207ENST00000488591 ZNF786Q8N393 782 aa12.87□□□□□ -0.35
CXCL12-207ENST00000488591 TCEANCQ8N8B7 351 aa12.87□□□□□ -0.35
CXCL12-207ENST00000488591 ZNF454Q8N9F8 522 aa12.87□□□□□ -0.35
CXCL12-207ENST00000488591 BBS1Q8NFJ9 593 aa12.87□□□□□ -0.35
CXCL12-207ENST00000488591 OR10S1Q8NGN2 331 aa12.87□□□□□ -0.35
CXCL12-207ENST00000488591 C10orf105Q8TEF2 133 aa12.87□□□□□ -0.35
CXCL12-207ENST00000488591 HAVCR1Q96D42 359 aa12.87□□□□□ -0.35
CXCL12-207ENST00000488591 TEAD3Q99594 435 aa12.87□□□□□ -0.35
CXCL12-207ENST00000488591 PIMREGQ9BSJ6 248 aa12.87□□□□□ -0.35
CXCL12-207ENST00000488591 C9orf16Q9BUW7 83 aa12.87□□□□□ -0.35
CXCL12-207ENST00000488591 C1QTNF5Q9BXJ0 243 aa12.87□□□□□ -0.35
CXCL12-207ENST00000488591 GABARAPL3Q9BY60 117 aa12.87□□□□□ -0.35
CXCL12-207ENST00000488591 DECR2Q9NUI1 292 aa12.87□□□□□ -0.35
CXCL12-207ENST00000488591 NKIRAS2Q9NYR9 191 aa12.87□□□□□ -0.35
CXCL12-207ENST00000488591 PTTG3PQ9NZH4 202 aa12.87□□□□□ -0.35
CXCL12-207ENST00000488591 ZDHHC8Q9ULC8 765 aa12.87□□□□□ -0.35
CXCL12-207ENST00000488591 M0R135 149 aa12.86□□□□□ -0.35
CXCL12-207ENST00000488591 EI24O14681 340 aa12.86□□□□□ -0.35
CXCL12-207ENST00000488591 PRKYO43930 277 aa12.86□□□□□ -0.35
CXCL12-207ENST00000488591 APOC1P02654 83 aa12.86□□□□□ -0.35
CXCL12-207ENST00000488591 ALPLP05186 524 aa12.86□□□□□ -0.35
CXCL12-207ENST00000488591 KITLGP21583 273 aa12.86□□□□□ -0.35
CXCL12-207ENST00000488591 SLC2A5P22732 501 aa12.86□□□□□ -0.35
CXCL12-207ENST00000488591 HSD11B1P28845 292 aa12.86□□□□□ -0.35
CXCL12-207ENST00000488591 EPHA2P29317 976 aa12.86□□□□□ -0.35
CXCL12-207ENST00000488591 MMP15P51511 669 aa12.86□□□□□ -0.35
CXCL12-207ENST00000488591 ALDH3A2P51648 485 aa12.86□□□□□ -0.35
CXCL12-207ENST00000488591 DRAM2Q6UX65 266 aa12.86□□□□□ -0.35
CXCL12-207ENST00000488591 COLCA1Q6ZS62 124 aa12.86□□□□□ -0.35
CXCL12-207ENST00000488591 RHOUQ7L0Q8 258 aa12.86□□□□□ -0.35
CXCL12-207ENST00000488591 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.86□□□□□ -0.35
CXCL12-207ENST00000488591 TIGD4Q8IY51 512 aa12.86□□□□□ -0.35
CXCL12-207ENST00000488591 PQLC1Q8N2U9 271 aa12.86□□□□□ -0.35
CXCL12-207ENST00000488591 CBR4Q8N4T8 237 aa12.86□□□□□ -0.35
CXCL12-207ENST00000488591 TMEM163Q8TC26 289 aa12.86□□□□□ -0.35
CXCL12-207ENST00000488591 ST7LQ8TDW4 575 aa12.86□□□□□ -0.35
CXCL12-207ENST00000488591 ZNF799Q96GE5 643 aa12.86□□□□□ -0.35
CXCL12-207ENST00000488591 DIRC2Q96SL1 478 aa12.86□□□□□ -0.35
CXCL12-207ENST00000488591 KCNJ15Q99712 375 aa12.86□□□□□ -0.35
CXCL12-207ENST00000488591 EGLN1Q9GZT9 426 aa12.86□□□□□ -0.35
CXCL12-207ENST00000488591 POFUT1Q9H488 388 aa12.86□□□□□ -0.35
CXCL12-207ENST00000488591 TOR3AQ9H497 397 aa12.86□□□□□ -0.35
CXCL12-207ENST00000488591 SP140LQ9H930 580 aa12.86□□□□□ -0.35
CXCL12-207ENST00000488591 USE1Q9NZ43 259 aa12.86□□□□□ -0.35
CXCL12-207ENST00000488591 PURGQ9UJV8 347 aaKnown RBP12.86□□□□□ -0.35
CXCL12-207ENST00000488591 SPRY3O43610 288 aa12.85□□□□□ -0.35
CXCL12-207ENST00000488591 LYNP07948 512 aa12.85□□□□□ -0.35
CXCL12-207ENST00000488591 PSKH1P11801 424 aa12.85□□□□□ -0.35
CXCL12-207ENST00000488591 SELEP16581 610 aa12.85□□□□□ -0.35
CXCL12-207ENST00000488591 NAA10P41227 235 aaPredicted RBP12.85□□□□□ -0.35
CXCL12-207ENST00000488591 PRKXP51817 358 aa12.85□□□□□ -0.35
CXCL12-207ENST00000488591 CDC42P60953 191 aa12.85□□□□□ -0.35
CXCL12-207ENST00000488591 CCL8P80075 99 aa12.85□□□□□ -0.35
CXCL12-207ENST00000488591 MRPS11P82912 194 aaKnown RBP12.85□□□□□ -0.35
CXCL12-207ENST00000488591 TSTQ16762 297 aaKnown RBP12.85□□□□□ -0.35
CXCL12-207ENST00000488591 NXNL2Q5VZ03 156 aa12.85□□□□□ -0.35
CXCL12-207ENST00000488591 CLEC9AQ6UXN8 241 aa12.85□□□□□ -0.35
CXCL12-207ENST00000488591 FBXW12Q6X9E4 464 aa12.85□□□□□ -0.35
CXCL12-207ENST00000488591 SPATC1Q76KD6 591 aa12.85□□□□□ -0.35
CXCL12-207ENST00000488591 MEPCEQ7L2J0 689 aaKnown RBP12.85□□□□□ -0.35
CXCL12-207ENST00000488591 SLC16A9Q7RTY1 509 aa12.85□□□□□ -0.35
CXCL12-207ENST00000488591 NAA40Q86UY6 237 aa12.85□□□□□ -0.35
CXCL12-207ENST00000488591 ZNF283Q8N7M2 679 aa12.85□□□□□ -0.35
CXCL12-207ENST00000488591 OTOSQ8NHW6 89 aa12.85□□□□□ -0.35
CXCL12-207ENST00000488591 THEM6Q8WUY1 208 aa12.85□□□□□ -0.35
CXCL12-207ENST00000488591 RDH5Q92781 318 aa12.85□□□□□ -0.35
CXCL12-207ENST00000488591 EME1Q96AY2 570 aa12.85□□□□□ -0.35
CXCL12-207ENST00000488591 IL4I1Q96RQ9 567 aa12.85□□□□□ -0.35
CXCL12-207ENST00000488591 ABHD6Q9BV23 337 aa12.85□□□□□ -0.35
CXCL12-207ENST00000488591 YIPF3Q9GZM5 350 aa12.85□□□□□ -0.35
CXCL12-207ENST00000488591 LAMP5Q9UJQ1 280 aa12.85□□□□□ -0.35
CXCL12-207ENST00000488591 ACANP16112 2415 aa12.85□□□□□ -0.35
CXCL12-207ENST00000488591 VPS13CQ709C8 3753 aa12.85□□□□□ -0.35
CXCL12-207ENST00000488591 TEP1Q99973 2627 aaKnown RBP12.84□□□□□ -0.35
CXCL12-207ENST00000488591 SLC22A31A6NKX4 558 aa12.84□□□□□ -0.35
CXCL12-207ENST00000488591 SELENOFO60613 162 aa12.84□□□□□ -0.35
CXCL12-207ENST00000488591 HPXP02790 462 aa12.84□□□□□ -0.35
CXCL12-207ENST00000488591 H2BFMP0C1H6 154 aa12.84□□□□□ -0.35
CXCL12-207ENST00000488591 TNFSF4P23510 183 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms