RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 NOL3O60936 208 aaKnown RBP2.65□□□□□ -1.99
ITGB1-214ENST00000488427 DNAJB6O75190 326 aa2.65□□□□□ -1.99
ITGB1-214ENST00000488427 IL1BP01584 269 aa2.65□□□□□ -1.99
ITGB1-214ENST00000488427 KRT8P05787 483 aa2.65□□□□□ -1.99
ITGB1-214ENST00000488427 CHTF8P0CG12 524 aa2.65□□□□□ -1.99
ITGB1-214ENST00000488427 THRAP10827 490 aa2.65□□□□□ -1.99
ITGB1-214ENST00000488427 EPB41P11171 864 aaKnown RBP2.65□□□□□ -1.99
ITGB1-214ENST00000488427 NCF1P14598 390 aaPredicted RBP2.65□□□□□ -1.99
ITGB1-214ENST00000488427 GLRA2P23416 452 aa2.65□□□□□ -1.99
ITGB1-214ENST00000488427 IL12AP29459 219 aa2.65□□□□□ -1.99
ITGB1-214ENST00000488427 FMO3P31513 532 aa2.65□□□□□ -1.99
ITGB1-214ENST00000488427 LHX2P50458 406 aa2.65□□□□□ -1.99
ITGB1-214ENST00000488427 GPM6AP51674 278 aa2.65□□□□□ -1.99
ITGB1-214ENST00000488427 ACTG1P63261 375 aa2.65□□□□□ -1.99
ITGB1-214ENST00000488427 ELOCQ15369 112 aa2.65□□□□□ -1.99
ITGB1-214ENST00000488427 ALX1Q15699 326 aa2.65□□□□□ -1.99
ITGB1-214ENST00000488427 ZNF691Q5VV52 312 aa2.65□□□□□ -1.99
ITGB1-214ENST00000488427 TMEM215Q68D42 235 aa2.65□□□□□ -1.99
ITGB1-214ENST00000488427 NCR3LG1Q68D85 454 aa2.65□□□□□ -1.99
ITGB1-214ENST00000488427 TMEM225Q6GV28 225 aa2.65□□□□□ -1.99
ITGB1-214ENST00000488427 FAM71E1Q6IPT2 247 aa2.65□□□□□ -1.99
ITGB1-214ENST00000488427 LRRC31Q6UY01 552 aa2.65□□□□□ -1.99
ITGB1-214ENST00000488427 ACP7Q6ZNF0 438 aa2.65□□□□□ -1.99
ITGB1-214ENST00000488427 H2AFVQ71UI9 128 aa2.65□□□□□ -1.99
ITGB1-214ENST00000488427 MCOLN3Q8TDD5 553 aa2.65□□□□□ -1.99
ITGB1-214ENST00000488427 CT55Q8WUE5 264 aa2.65□□□□□ -1.99
ITGB1-214ENST00000488427 CTNNBL1Q8WYA6 563 aaPredicted RBP2.65□□□□□ -1.99
ITGB1-214ENST00000488427 C4orf36Q96KX1 117 aa2.65□□□□□ -1.99
ITGB1-214ENST00000488427 NAT9Q9BTE0 207 aa2.65□□□□□ -1.99
ITGB1-214ENST00000488427 ALG12Q9BV10 488 aa2.65□□□□□ -1.99
ITGB1-214ENST00000488427 SPZ1Q9BXG8 430 aa2.65□□□□□ -1.99
ITGB1-214ENST00000488427 TCEAL2Q9H3H9 227 aaPredicted RBP2.65□□□□□ -1.99
ITGB1-214ENST00000488427 SIAEQ9HAT2 523 aa2.65□□□□□ -1.99
ITGB1-214ENST00000488427 KCNJ16Q9NPI9 418 aa2.65□□□□□ -1.99
ITGB1-214ENST00000488427 XPNPEP1Q9NQW7 623 aa2.65□□□□□ -1.99
ITGB1-214ENST00000488427 SLC17A5Q9NRA2 495 aa2.65□□□□□ -1.99
ITGB1-214ENST00000488427 FBXO8Q9NRD0 319 aa2.65□□□□□ -1.99
ITGB1-214ENST00000488427 KCNIP1Q9NZI2 227 aa2.65□□□□□ -1.99
ITGB1-214ENST00000488427 RNF14Q9UBS8 474 aa2.65□□□□□ -1.99
ITGB1-214ENST00000488427 N6AMT1Q9Y5N5 214 aa2.65□□□□□ -1.99
ITGB1-214ENST00000488427 ARHGAP21Q5T5U3 1957 aa2.65□□□□□ -1.99
ITGB1-214ENST00000488427 A0A0G2JN53 185 aa2.64□□□□□ -1.99
ITGB1-214ENST00000488427 A0A1B0GWJ7 208 aa2.64□□□□□ -1.99
ITGB1-214ENST00000488427 VSTM2BA6NLU5 285 aa2.64□□□□□ -1.99
ITGB1-214ENST00000488427 LOC110117498-PIK3R3F6TDL0 507 aa2.64□□□□□ -1.99
ITGB1-214ENST00000488427 POLR2DO15514 142 aaKnown RBP2.64□□□□□ -1.99
ITGB1-214ENST00000488427 TBX19O60806 448 aa2.64□□□□□ -1.99
ITGB1-214ENST00000488427 PFKFB2O60825 505 aa2.64□□□□□ -1.99
ITGB1-214ENST00000488427 AP2A1O95782 977 aa2.64□□□□□ -1.99
ITGB1-214ENST00000488427 FREM3P0C091 2139 aa2.64□□□□□ -1.99
ITGB1-214ENST00000488427 CTSEP14091 401 aa2.64□□□□□ -1.99
ITGB1-214ENST00000488427 POLR2EP19388 210 aaKnown RBP2.64□□□□□ -1.99
ITGB1-214ENST00000488427 MAGP20916 626 aa2.64□□□□□ -1.99
ITGB1-214ENST00000488427 ARL2P36404 184 aa2.64□□□□□ -1.99
ITGB1-214ENST00000488427 PTGDSP41222 190 aa2.64□□□□□ -1.99
ITGB1-214ENST00000488427 MAP3K8P41279 467 aa2.64□□□□□ -1.99
ITGB1-214ENST00000488427 VDAC2P45880 294 aaPredicted RBP2.64□□□□□ -1.99
ITGB1-214ENST00000488427 RPS15P62841 145 aaKnown RBP2.64□□□□□ -1.99
ITGB1-214ENST00000488427 ACTA1P68133 377 aa2.64□□□□□ -1.99
ITGB1-214ENST00000488427 TFF3Q07654 80 aa2.64□□□□□ -1.99
ITGB1-214ENST00000488427 DPYSL2Q16555 572 aa2.64□□□□□ -1.99
ITGB1-214ENST00000488427 SLC25A52Q3SY17 297 aa2.64□□□□□ -1.99
ITGB1-214ENST00000488427 LRRC10Q5BKY1 277 aa2.64□□□□□ -1.99
ITGB1-214ENST00000488427 CCDC80Q76M96 950 aa2.64□□□□□ -1.99
ITGB1-214ENST00000488427 OTUD6AQ7L8S5 288 aa2.64□□□□□ -1.99
ITGB1-214ENST00000488427 PAQR7Q86WK9 346 aa2.64□□□□□ -1.99
ITGB1-214ENST00000488427 GKN2Q86XP6 184 aa2.64□□□□□ -1.99
ITGB1-214ENST00000488427 LIX1Q8N485 282 aa2.64□□□□□ -1.99
ITGB1-214ENST00000488427 OR1N2Q8NGR9 330 aa2.64□□□□□ -1.99
ITGB1-214ENST00000488427 OR2L8Q8NGY9 312 aa2.64□□□□□ -1.99
ITGB1-214ENST00000488427 OR9G1Q8NH87 305 aa2.64□□□□□ -1.99
ITGB1-214ENST00000488427 TRMT10AQ8TBZ6 339 aaKnown RBP2.64□□□□□ -1.99
ITGB1-214ENST00000488427 PHF10Q8WUB8 498 aaKnown RBP2.64□□□□□ -1.99
ITGB1-214ENST00000488427 RPUSD4Q96CM3 377 aaKnown RBP2.64□□□□□ -1.99
ITGB1-214ENST00000488427 TM4SF19Q96DZ7 209 aa2.64□□□□□ -1.99
ITGB1-214ENST00000488427 CNDP1Q96KN2 507 aa2.64□□□□□ -1.99
ITGB1-214ENST00000488427 BMFQ96LC9 184 aa2.64□□□□□ -1.99
ITGB1-214ENST00000488427 C20orf85Q9H1P6 137 aa2.64□□□□□ -1.99
ITGB1-214ENST00000488427 RBKSQ9H477 322 aa2.64□□□□□ -1.99
ITGB1-214ENST00000488427 REEP4Q9H6H4 257 aa2.64□□□□□ -1.99
ITGB1-214ENST00000488427 COQ10BQ9H8M1 238 aa2.64□□□□□ -1.99
ITGB1-214ENST00000488427 NHEJ1Q9H9Q4 299 aaPredicted RBP2.64□□□□□ -1.99
ITGB1-214ENST00000488427 POPDC2Q9HBU9 364 aa2.64□□□□□ -1.99
ITGB1-214ENST00000488427 PCSK1NQ9UHG2 260 aa2.64□□□□□ -1.99
ITGB1-214ENST00000488427 SLC25A15Q9Y619 301 aa2.64□□□□□ -1.99
ITGB1-214ENST00000488427 CPAMD8Q8IZJ3 1885 aa2.64□□□□□ -1.99
ITGB1-214ENST00000488427 ALPK2Q86TB3 2170 aa2.64□□□□□ -1.99
ITGB1-214ENST00000488427 BTN3A3O00478 584 aa2.63□□□□□ -1.99
ITGB1-214ENST00000488427 TCF21O43680 179 aa2.63□□□□□ -1.99
ITGB1-214ENST00000488427 ZNF324O75467 553 aaPredicted RBP2.63□□□□□ -1.99
ITGB1-214ENST00000488427 B3GALNT1O75752 331 aa2.63□□□□□ -1.99
ITGB1-214ENST00000488427 IGHG4P01861 327 aa2.63□□□□□ -1.99
ITGB1-214ENST00000488427 PTMAP06454 111 aaKnown RBP2.63□□□□□ -1.99
ITGB1-214ENST00000488427 PNMTP11086 282 aa2.63□□□□□ -1.99
ITGB1-214ENST00000488427 CXCR2P25025 360 aa2.63□□□□□ -1.99
ITGB1-214ENST00000488427 LINC00315P59091 139 aa2.63□□□□□ -1.99
ITGB1-214ENST00000488427 CYTH1Q15438 398 aa2.63□□□□□ -1.99
ITGB1-214ENST00000488427 HNRNPA1L2Q32P51 320 aaKnown RBP2.63□□□□□ -1.99
ITGB1-214ENST00000488427 RFX4Q33E94 735 aa2.63□□□□□ -1.99
ITGB1-214ENST00000488427 FILIP1LQ4L180 1135 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms