RNA–Protein interactions for RNA: ENST00000488072.1

SHROOM1-205, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-205ENST00000488072 BLVRAP53004 296 aa14.68□□□□□ -0.06
SHROOM1-205ENST00000488072 ATP5J2P56134 94 aa14.68□□□□□ -0.06
SHROOM1-205ENST00000488072 SNRPGP62308 76 aaKnown RBP14.68□□□□□ -0.06
SHROOM1-205ENST00000488072 GGTLC2Q14390 218 aa14.68□□□□□ -0.06
SHROOM1-205ENST00000488072 SPRNQ5BIV9 151 aa14.68□□□□□ -0.06
SHROOM1-205ENST00000488072 PLEKHG7Q6ZR37 379 aa14.68□□□□□ -0.06
SHROOM1-205ENST00000488072 SLC35F2Q8IXU6 374 aa14.68□□□□□ -0.06
SHROOM1-205ENST00000488072 OR2AE1Q8NHA4 323 aa14.68□□□□□ -0.06
SHROOM1-205ENST00000488072 RHOXF1Q8NHV9 184 aa14.68□□□□□ -0.06
SHROOM1-205ENST00000488072 SYNPRQ8TBG9 265 aa14.68□□□□□ -0.06
SHROOM1-205ENST00000488072 RNF133Q8WVZ7 376 aa14.68□□□□□ -0.06
SHROOM1-205ENST00000488072 PPP1R14AQ96A00 147 aa14.68□□□□□ -0.06
SHROOM1-205ENST00000488072 CNN2Q99439 309 aaKnown RBP14.68□□□□□ -0.06
SHROOM1-205ENST00000488072 VRK1Q99986 396 aaPredicted RBP14.68□□□□□ -0.06
SHROOM1-205ENST00000488072 BCL2L14Q9BZR8 327 aa14.68□□□□□ -0.06
SHROOM1-205ENST00000488072 BRD7Q9NPI1 651 aa14.68□□□□□ -0.06
SHROOM1-205ENST00000488072 FAIMQ9NVQ4 179 aa14.68□□□□□ -0.06
SHROOM1-205ENST00000488072 M0R135 149 aa14.67□□□□□ -0.06
SHROOM1-205ENST00000488072 TMCC2O75069 709 aa14.67□□□□□ -0.06
SHROOM1-205ENST00000488072 ATP6V1G2O95670 118 aa14.67□□□□□ -0.06
SHROOM1-205ENST00000488072 LYNP07948 512 aa14.67□□□□□ -0.06
SHROOM1-205ENST00000488072 SBK2P0C263 348 aa14.67□□□□□ -0.06
SHROOM1-205ENST00000488072 ZNF250P15622 560 aa14.67□□□□□ -0.06
SHROOM1-205ENST00000488072 AQP4P55087 323 aa14.67□□□□□ -0.06
SHROOM1-205ENST00000488072 PSG7Q13046 419 aa14.67□□□□□ -0.06
SHROOM1-205ENST00000488072 TAF13Q15543 124 aa14.67□□□□□ -0.06
SHROOM1-205ENST00000488072 LCN1P1Q5VSP4 162 aa14.67□□□□□ -0.06
SHROOM1-205ENST00000488072 OR5AS1Q8N127 324 aa14.67□□□□□ -0.06
SHROOM1-205ENST00000488072 PACRGLQ8N7B6 248 aa14.67□□□□□ -0.06
SHROOM1-205ENST00000488072 ZNF283Q8N7M2 679 aa14.67□□□□□ -0.06
SHROOM1-205ENST00000488072 CNIH3Q8TBE1 160 aa14.67□□□□□ -0.06
SHROOM1-205ENST00000488072 CMBLQ96DG6 245 aa14.67□□□□□ -0.06
SHROOM1-205ENST00000488072 ZNF799Q96GE5 643 aa14.67□□□□□ -0.06
SHROOM1-205ENST00000488072 KCNJ15Q99712 375 aa14.67□□□□□ -0.06
SHROOM1-205ENST00000488072 APOL4Q9BPW4 351 aa14.67□□□□□ -0.06
SHROOM1-205ENST00000488072 CXorf56Q9H5V9 222 aa14.67□□□□□ -0.06
SHROOM1-205ENST00000488072 TBCCD1Q9NVR7 557 aa14.67□□□□□ -0.06
SHROOM1-205ENST00000488072 LAMP5Q9UJQ1 280 aa14.67□□□□□ -0.06
SHROOM1-205ENST00000488072 RRP15Q9Y3B9 282 aaKnown RBP14.67□□□□□ -0.06
SHROOM1-205ENST00000488072 IGLV3-9A0A075B6K5 115 aa14.66□□□□□ -0.06
SHROOM1-205ENST00000488072 A0A1W2PPW3 197 aa14.66□□□□□ -0.06
SHROOM1-205ENST00000488072 SLC22A31A6NKX4 558 aa14.66□□□□□ -0.06
SHROOM1-205ENST00000488072 LYNX1G3V0Z9 82 aa14.66□□□□□ -0.06
SHROOM1-205ENST00000488072 ICMTO60725 284 aa14.66□□□□□ -0.06
SHROOM1-205ENST00000488072 WBP4O75554 376 aaKnown RBP14.66□□□□□ -0.06
SHROOM1-205ENST00000488072 LYNX1P0DP58 116 aa14.66□□□□□ -0.06
SHROOM1-205ENST00000488072 OTX1P32242 354 aaPredicted RBP14.66□□□□□ -0.06
SHROOM1-205ENST00000488072 SLC6A9P48067 706 aa14.66□□□□□ -0.06
SHROOM1-205ENST00000488072 IL5RAQ01344 420 aa14.66□□□□□ -0.06
SHROOM1-205ENST00000488072 OCLNQ16625 522 aa14.66□□□□□ -0.06
SHROOM1-205ENST00000488072 Q5PR19 223 aa14.66□□□□□ -0.06
SHROOM1-205ENST00000488072 C6orf52Q5T4I8 152 aa14.66□□□□□ -0.06
SHROOM1-205ENST00000488072 ZNF691Q5VV52 312 aa14.66□□□□□ -0.06
SHROOM1-205ENST00000488072 OR2T2Q6IF00 324 aa14.66□□□□□ -0.06
SHROOM1-205ENST00000488072 LAIR2Q6ISS4 152 aa14.66□□□□□ -0.06
SHROOM1-205ENST00000488072 COLCA1Q6ZS62 124 aa14.66□□□□□ -0.06
SHROOM1-205ENST00000488072 GID4Q8IVV7 300 aa14.66□□□□□ -0.06
SHROOM1-205ENST00000488072 ZNF555Q8NEP9 628 aa14.66□□□□□ -0.06
SHROOM1-205ENST00000488072 RNFT2Q96EX2 444 aa14.66□□□□□ -0.06
SHROOM1-205ENST00000488072 FOXC2Q99958 501 aa14.66□□□□□ -0.06
SHROOM1-205ENST00000488072 RHNO1Q9BSD3 238 aa14.66□□□□□ -0.06
SHROOM1-205ENST00000488072 SOX7Q9BT81 388 aa14.66□□□□□ -0.06
SHROOM1-205ENST00000488072 ADI1Q9BV57 179 aa14.66□□□□□ -0.06
SHROOM1-205ENST00000488072 C1QTNF5Q9BXJ0 243 aa14.66□□□□□ -0.06
SHROOM1-205ENST00000488072 GSX2Q9BZM3 304 aa14.66□□□□□ -0.06
SHROOM1-205ENST00000488072 YIPF3Q9GZM5 350 aa14.66□□□□□ -0.06
SHROOM1-205ENST00000488072 ELOVL3Q9HB03 270 aa14.66□□□□□ -0.06
SHROOM1-205ENST00000488072 ARFGEF3Q5TH69 2177 aa14.66□□□□□ -0.06
SHROOM1-205ENST00000488072 ZSCAN5BA6NJL1 495 aa14.65□□□□□ -0.06
SHROOM1-205ENST00000488072 ZNF878C9JN71 531 aa14.65□□□□□ -0.06
SHROOM1-205ENST00000488072 NCR1O76036 304 aa14.65□□□□□ -0.06
SHROOM1-205ENST00000488072 H2BFMP0C1H6 154 aa14.65□□□□□ -0.06
SHROOM1-205ENST00000488072 MAGEB1P43366 347 aa14.65□□□□□ -0.06
SHROOM1-205ENST00000488072 CX3CR1P49238 355 aa14.65□□□□□ -0.06
SHROOM1-205ENST00000488072 TPTEP56180 551 aa14.65□□□□□ -0.06
SHROOM1-205ENST00000488072 KLF3P57682 345 aaPredicted RBP14.65□□□□□ -0.06
SHROOM1-205ENST00000488072 ZNF121P58317 390 aaPredicted RBP14.65□□□□□ -0.06
SHROOM1-205ENST00000488072 CXCR4P61073 352 aa14.65□□□□□ -0.06
SHROOM1-205ENST00000488072 RPS23P62266 143 aaKnown RBP14.65□□□□□ -0.06
SHROOM1-205ENST00000488072 SNRPD2P62316 118 aaKnown RBP14.65□□□□□ -0.06
SHROOM1-205ENST00000488072 ZNF92Q03936 586 aa14.65□□□□□ -0.06
SHROOM1-205ENST00000488072 ECH1Q13011 328 aa14.65□□□□□ -0.06
SHROOM1-205ENST00000488072 ZNF718Q3SXZ3 478 aa14.65□□□□□ -0.06
SHROOM1-205ENST00000488072 GLYATL3Q5SZD4 288 aa14.65□□□□□ -0.06
SHROOM1-205ENST00000488072 FAM57BQ71RH2 274 aa14.65□□□□□ -0.06
SHROOM1-205ENST00000488072 PRSS45Q7RTY3 260 aa14.65□□□□□ -0.06
SHROOM1-205ENST00000488072 DHRSXQ8N5I4 330 aa14.65□□□□□ -0.06
SHROOM1-205ENST00000488072 OR10H4Q8NGA5 316 aa14.65□□□□□ -0.06
SHROOM1-205ENST00000488072 TRUB1Q8WWH5 349 aaKnown RBP14.65□□□□□ -0.06
SHROOM1-205ENST00000488072 LGALS12Q96DT0 336 aa14.65□□□□□ -0.06
SHROOM1-205ENST00000488072 CXXC4Q9H2H0 198 aa14.65□□□□□ -0.06
SHROOM1-205ENST00000488072 MSL2Q9HCI7 577 aa14.65□□□□□ -0.06
SHROOM1-205ENST00000488072 DYNLRB1Q9NP97 96 aa14.65□□□□□ -0.06
SHROOM1-205ENST00000488072 WARS2Q9UGM6 360 aaKnown RBP14.65□□□□□ -0.06
SHROOM1-205ENST00000488072 ATPIF1Q9UII2 106 aa14.65□□□□□ -0.06
SHROOM1-205ENST00000488072 LRP12Q9Y561 859 aa14.65□□□□□ -0.06
SHROOM1-205ENST00000488072 A0A1W2PQL4 384 aaPredicted RBP14.64□□□□□ -0.07
SHROOM1-205ENST00000488072 TRIM64A6NGJ6 449 aa14.64□□□□□ -0.07
SHROOM1-205ENST00000488072 TRIM64BA6NI03 449 aa14.64□□□□□ -0.07
SHROOM1-205ENST00000488072 SSX4O60224 188 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms