RNA–Protein interactions for RNA: ENST00000488023.1

HFM1-208, Transcript of HFM1, ATP dependent DNA helicase homolog, humanhuman

TSL 5

Gene HFM1, Length 1,699 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1-208ENST00000488023 SHISA9B4DS77 424 aa2.73□□□□□ -1.97
HFM1-208ENST00000488023 H7C2Y5 167 aa2.73□□□□□ -1.97
HFM1-208ENST00000488023 TRAPPC3O43617 180 aa2.73□□□□□ -1.97
HFM1-208ENST00000488023 RAB3DO95716 219 aa2.73□□□□□ -1.97
HFM1-208ENST00000488023 EIF4EP06730 217 aaKnown RBP2.73□□□□□ -1.97
HFM1-208ENST00000488023 HSPD1P10809 573 aaKnown RBP2.73□□□□□ -1.97
HFM1-208ENST00000488023 RAB5AP20339 215 aa2.73□□□□□ -1.97
HFM1-208ENST00000488023 NTSP30990 170 aa2.73□□□□□ -1.97
HFM1-208ENST00000488023 FMO3P31513 532 aa2.73□□□□□ -1.97
HFM1-208ENST00000488023 MAS1LP35410 378 aa2.73□□□□□ -1.97
HFM1-208ENST00000488023 COILP38432 576 aaPredicted RBP2.73□□□□□ -1.97
HFM1-208ENST00000488023 FZD2Q14332 565 aa2.73□□□□□ -1.97
HFM1-208ENST00000488023 GUSBP1Q15486 140 aa2.73□□□□□ -1.97
HFM1-208ENST00000488023 COQ5Q5HYK3 327 aa2.73□□□□□ -1.97
HFM1-208ENST00000488023 OR2B11Q5JQS5 317 aa2.73□□□□□ -1.97
HFM1-208ENST00000488023 FAM27D1Q5T7N8 215 aa2.73□□□□□ -1.97
HFM1-208ENST00000488023 C1orf146Q5VVC0 180 aa2.73□□□□□ -1.97
HFM1-208ENST00000488023 RWDD4Q6NW29 188 aaKnown RBP2.73□□□□□ -1.97
HFM1-208ENST00000488023 TMUB2Q71RG4 321 aa2.73□□□□□ -1.97
HFM1-208ENST00000488023 MRPL55Q7Z7F7 128 aaKnown RBP2.73□□□□□ -1.97
HFM1-208ENST00000488023 HIPK1Q86Z02 1210 aa2.73□□□□□ -1.97
HFM1-208ENST00000488023 FAM71AQ8IYT1 594 aa2.73□□□□□ -1.97
HFM1-208ENST00000488023 LRRC34Q8IZ02 419 aa2.73□□□□□ -1.97
HFM1-208ENST00000488023 ATPAF2Q8N5M1 289 aa2.73□□□□□ -1.97
HFM1-208ENST00000488023 OR51G1Q8NGK1 321 aa2.73□□□□□ -1.97
HFM1-208ENST00000488023 ZNF461Q8TAF7 563 aa2.73□□□□□ -1.97
HFM1-208ENST00000488023 FAM76AQ8TAV0 307 aa2.73□□□□□ -1.97
HFM1-208ENST00000488023 SFXN5Q8TD22 340 aa2.73□□□□□ -1.97
HFM1-208ENST00000488023 PHF10Q8WUB8 498 aaKnown RBP2.73□□□□□ -1.97
HFM1-208ENST00000488023 IFT81Q8WYA0 676 aa2.73□□□□□ -1.97
HFM1-208ENST00000488023 FLYWCH2Q96CP2 140 aaKnown RBP2.73□□□□□ -1.97
HFM1-208ENST00000488023 SGTBQ96EQ0 304 aa2.73□□□□□ -1.97
HFM1-208ENST00000488023 WDR34Q96EX3 536 aa2.73□□□□□ -1.97
HFM1-208ENST00000488023 DCUN1D5Q9BTE7 237 aa2.73□□□□□ -1.97
HFM1-208ENST00000488023 OSBPL11Q9BXB4 747 aa2.73□□□□□ -1.97
HFM1-208ENST00000488023 SH2D2AQ9NP31 389 aa2.73□□□□□ -1.97
HFM1-208ENST00000488023 ABCB10Q9NRK6 738 aa2.73□□□□□ -1.97
HFM1-208ENST00000488023 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.73□□□□□ -1.97
HFM1-208ENST00000488023 TREX1Q9NSU2 369 aa2.73□□□□□ -1.97
HFM1-208ENST00000488023 EMC3Q9P0I2 261 aa2.73□□□□□ -1.97
HFM1-208ENST00000488023 CLCF1Q9UBD9 225 aa2.73□□□□□ -1.97
HFM1-208ENST00000488023 CES1P1Q9UKY3 287 aa2.73□□□□□ -1.97
HFM1-208ENST00000488023 VSIG4Q9Y279 399 aa2.73□□□□□ -1.97
HFM1-208ENST00000488023 SNX24Q9Y343 169 aa2.73□□□□□ -1.97
HFM1-208ENST00000488023 CCDC180Q9P1Z9 1646 aa2.73□□□□□ -1.97
HFM1-208ENST00000488023 IGLV1-36A0A0B4J1U3 117 aa2.73□□□□□ -1.97
HFM1-208ENST00000488023 A0A0B4J2E0 115 aa2.73□□□□□ -1.97
HFM1-208ENST00000488023 GOLGA8IPA6NC78 632 aa2.73□□□□□ -1.97
HFM1-208ENST00000488023 GOLGA8JA6NMD2 632 aa2.73□□□□□ -1.97
HFM1-208ENST00000488023 EPM2AB3EWF7 344 aa2.73□□□□□ -1.97
HFM1-208ENST00000488023 GOLGA8KD6RF30 607 aa2.73□□□□□ -1.97
HFM1-208ENST00000488023 GOLGA8MH3BSY2 632 aa2.73□□□□□ -1.97
HFM1-208ENST00000488023 SHOX2O60902 331 aaPredicted RBP2.73□□□□□ -1.97
HFM1-208ENST00000488023 KBTBD11O94819 623 aa2.73□□□□□ -1.97
HFM1-208ENST00000488023 DUSP14O95147 198 aaKnown RBP2.73□□□□□ -1.97
HFM1-208ENST00000488023 AHSA1O95433 338 aa2.73□□□□□ -1.97
HFM1-208ENST00000488023 HPRT1P00492 218 aa2.73□□□□□ -1.97
HFM1-208ENST00000488023 IGLV1-44P01699 117 aa2.73□□□□□ -1.97
HFM1-208ENST00000488023 GOLGA8HP0CJ92 632 aa2.73□□□□□ -1.97
HFM1-208ENST00000488023 CCDC166P0CW27 439 aa2.73□□□□□ -1.97
HFM1-208ENST00000488023 CD37P11049 281 aa2.73□□□□□ -1.97
HFM1-208ENST00000488023 PGAM2P15259 253 aa2.73□□□□□ -1.97
HFM1-208ENST00000488023 ANOS1P23352 680 aa2.73□□□□□ -1.97
HFM1-208ENST00000488023 LOXP28300 417 aaPredicted RBP2.73□□□□□ -1.97
HFM1-208ENST00000488023 GALR1P47211 349 aa2.73□□□□□ -1.97
HFM1-208ENST00000488023 RPL14P50914 215 aaKnown RBP2.73□□□□□ -1.97
HFM1-208ENST00000488023 OR10A3P58181 314 aa2.73□□□□□ -1.97
HFM1-208ENST00000488023 ZNF121P58317 390 aaPredicted RBP2.73□□□□□ -1.97
HFM1-208ENST00000488023 PRPS1P60891 318 aa2.73□□□□□ -1.97
HFM1-208ENST00000488023 CXCL6P80162 114 aa2.73□□□□□ -1.97
HFM1-208ENST00000488023 BASP1P80723 227 aaKnown RBP2.73□□□□□ -1.97
HFM1-208ENST00000488023 PRKCDQ05655 676 aa2.73□□□□□ -1.97
HFM1-208ENST00000488023 FCHO2Q0JRZ9 810 aa2.73□□□□□ -1.97
HFM1-208ENST00000488023 ST3GAL4Q11206 333 aa2.73□□□□□ -1.97
HFM1-208ENST00000488023 STX4Q12846 297 aa2.73□□□□□ -1.97
HFM1-208ENST00000488023 AQP6Q13520 282 aa2.73□□□□□ -1.97
HFM1-208ENST00000488023 RAB31Q13636 194 aa2.73□□□□□ -1.97
HFM1-208ENST00000488023 UBE2UQ5VVX9 321 aa2.73□□□□□ -1.97
HFM1-208ENST00000488023 NPSR1Q6W5P4 371 aa2.73□□□□□ -1.97
HFM1-208ENST00000488023 Q6ZT83 130 aa2.73□□□□□ -1.97
HFM1-208ENST00000488023 TMEM179Q6ZVK1 233 aa2.73□□□□□ -1.97
HFM1-208ENST00000488023 COX15Q7KZN9 410 aa2.73□□□□□ -1.97
HFM1-208ENST00000488023 ZNF589Q86UQ0 364 aaPredicted RBP2.73□□□□□ -1.97
HFM1-208ENST00000488023 P2RY8Q86VZ1 359 aa2.73□□□□□ -1.97
HFM1-208ENST00000488023 CCDC71LQ8N9Z2 235 aa2.73□□□□□ -1.97
HFM1-208ENST00000488023 CSNK1G2-AS1Q8NCQ2 148 aa2.73□□□□□ -1.97
HFM1-208ENST00000488023 RPUSD4Q96CM3 377 aaKnown RBP2.73□□□□□ -1.97
HFM1-208ENST00000488023 RNF145Q96MT1 663 aa2.73□□□□□ -1.97
HFM1-208ENST00000488023 OR5M11Q96RB7 305 aa2.73□□□□□ -1.97
HFM1-208ENST00000488023 P2RX4Q99571 388 aa2.73□□□□□ -1.97
HFM1-208ENST00000488023 RSG1Q9BU20 258 aa2.73□□□□□ -1.97
HFM1-208ENST00000488023 ZNF426Q9BUY5 554 aa2.73□□□□□ -1.97
HFM1-208ENST00000488023 SRMSQ9H3Y6 488 aa2.73□□□□□ -1.97
HFM1-208ENST00000488023 ZNF696Q9H7X3 374 aa2.73□□□□□ -1.97
HFM1-208ENST00000488023 HEXA-AS1Q9H8Q6 139 aa2.73□□□□□ -1.97
HFM1-208ENST00000488023 ACOT13Q9NPJ3 140 aa2.73□□□□□ -1.97
HFM1-208ENST00000488023 DPM3Q9P2X0 92 aa2.73□□□□□ -1.97
HFM1-208ENST00000488023 FBXL3Q9UKT7 428 aa2.73□□□□□ -1.97
HFM1-208ENST00000488023 OR51B2Q9Y5P1 312 aa2.73□□□□□ -1.97
HFM1-208ENST00000488023 IGHV3-35A0A0C4DH35 117 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms