RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 GUSBP1Q15486 140 aa8.27□□□□□ -1.08
SF3B1-211ENST00000487698 CNIH2Q6PI25 160 aa8.27□□□□□ -1.08
SF3B1-211ENST00000487698 DIRAS2Q96HU8 199 aa8.27□□□□□ -1.08
SF3B1-211ENST00000487698 GMPPAQ96IJ6 420 aaPredicted RBP8.27□□□□□ -1.08
SF3B1-211ENST00000487698 WACQ9BTA9 647 aa8.27□□□□□ -1.08
SF3B1-211ENST00000487698 SRRQ9GZT4 340 aa8.27□□□□□ -1.08
SF3B1-211ENST00000487698 BRD7Q9NPI1 651 aa8.27□□□□□ -1.08
SF3B1-211ENST00000487698 GLRX2Q9NS18 164 aa8.27□□□□□ -1.08
SF3B1-211ENST00000487698 PLEK2Q9NYT0 353 aa8.27□□□□□ -1.08
SF3B1-211ENST00000487698 ABRACLQ9P1F3 81 aa8.27□□□□□ -1.08
SF3B1-211ENST00000487698 ZNF319Q9P2F9 582 aa8.27□□□□□ -1.08
SF3B1-211ENST00000487698 MALT1Q9UDY8 824 aa8.27□□□□□ -1.08
SF3B1-211ENST00000487698 FOXJ3Q9UPW0 622 aa8.27□□□□□ -1.08
SF3B1-211ENST00000487698 V9GY05 133 aa8.27□□□□□ -1.08
SF3B1-211ENST00000487698 OR14I1A6ND48 311 aa8.27□□□□□ -1.09
SF3B1-211ENST00000487698 KRT33AO76009 404 aa8.27□□□□□ -1.09
SF3B1-211ENST00000487698 PAHP00439 452 aa8.27□□□□□ -1.09
SF3B1-211ENST00000487698 IGLV3-1P01715 115 aa8.27□□□□□ -1.09
SF3B1-211ENST00000487698 CD2P06729 351 aa8.27□□□□□ -1.09
SF3B1-211ENST00000487698 SLC2A1P11166 492 aa8.27□□□□□ -1.09
SF3B1-211ENST00000487698 ZNF32P17041 273 aa8.27□□□□□ -1.09
SF3B1-211ENST00000487698 ELK1P19419 428 aa8.27□□□□□ -1.09
SF3B1-211ENST00000487698 ARF1P84077 181 aaKnown RBP8.27□□□□□ -1.09
SF3B1-211ENST00000487698 TBR1Q16650 682 aa8.27□□□□□ -1.09
SF3B1-211ENST00000487698 ZNF181Q2M3W8 571 aa8.27□□□□□ -1.09
SF3B1-211ENST00000487698 METAP1DQ6UB28 335 aaPredicted RBP8.27□□□□□ -1.09
SF3B1-211ENST00000487698 ZNF813Q6ZN06 617 aa8.27□□□□□ -1.09
SF3B1-211ENST00000487698 FGD2Q7Z6J4 655 aa8.27□□□□□ -1.09
SF3B1-211ENST00000487698 LRRC28Q86X40 367 aaPredicted RBP8.27□□□□□ -1.09
SF3B1-211ENST00000487698 SKA3Q8IX90 412 aa8.27□□□□□ -1.09
SF3B1-211ENST00000487698 ZNF283Q8N7M2 679 aa8.27□□□□□ -1.09
SF3B1-211ENST00000487698 OR13C3Q8NGS6 347 aa8.27□□□□□ -1.09
SF3B1-211ENST00000487698 FGFBP3Q8TAT2 258 aa8.27□□□□□ -1.09
SF3B1-211ENST00000487698 TRMT10AQ8TBZ6 339 aaKnown RBP8.27□□□□□ -1.09
SF3B1-211ENST00000487698 CCDC32Q9BV29 185 aa8.27□□□□□ -1.09
SF3B1-211ENST00000487698 SLC17A5Q9NRA2 495 aa8.27□□□□□ -1.09
SF3B1-211ENST00000487698 ZNF224Q9NZL3 707 aa8.27□□□□□ -1.09
SF3B1-211ENST00000487698 A0A0B4J203 849 aa8.26□□□□□ -1.09
SF3B1-211ENST00000487698 A0A1B0GVG6 124 aa8.26□□□□□ -1.09
SF3B1-211ENST00000487698 RRP8O43159 456 aaKnown RBP8.26□□□□□ -1.09
SF3B1-211ENST00000487698 ZNHIT1O43257 154 aa8.26□□□□□ -1.09
SF3B1-211ENST00000487698 TBX1O43435 398 aa8.26□□□□□ -1.09
SF3B1-211ENST00000487698 LMX1BO60663 402 aa8.26□□□□□ -1.09
SF3B1-211ENST00000487698 EIF4EP06730 217 aaKnown RBP8.26□□□□□ -1.09
SF3B1-211ENST00000487698 CD37P11049 281 aa8.26□□□□□ -1.09
SF3B1-211ENST00000487698 ZNF12P17014 697 aa8.26□□□□□ -1.09
SF3B1-211ENST00000487698 OR3A2P47893 321 aa8.26□□□□□ -1.09
SF3B1-211ENST00000487698 FOXG1P55316 489 aaPredicted RBP8.26□□□□□ -1.09
SF3B1-211ENST00000487698 PCBD1P61457 104 aa8.26□□□□□ -1.09
SF3B1-211ENST00000487698 PSG4Q00888 419 aa8.26□□□□□ -1.09
SF3B1-211ENST00000487698 GALK2Q01415 458 aa8.26□□□□□ -1.09
SF3B1-211ENST00000487698 ECH1Q13011 328 aa8.26□□□□□ -1.09
SF3B1-211ENST00000487698 RIN1Q13671 783 aa8.26□□□□□ -1.09
SF3B1-211ENST00000487698 PLEKHN1Q494U1 663 aaPredicted RBP8.26□□□□□ -1.09
SF3B1-211ENST00000487698 ZNF774Q6NX45 483 aa8.26□□□□□ -1.09
SF3B1-211ENST00000487698 SLC16A14Q7RTX9 510 aa8.26□□□□□ -1.09
SF3B1-211ENST00000487698 LYSMD2Q8IV50 215 aa8.26□□□□□ -1.09
SF3B1-211ENST00000487698 ZNF100Q8IYN0 542 aa8.26□□□□□ -1.09
SF3B1-211ENST00000487698 INTS1Q8N201 2190 aaKnown RBP8.26□□□□□ -1.09
SF3B1-211ENST00000487698 ZNF433Q8N7K0 673 aaPredicted RBP8.26□□□□□ -1.09
SF3B1-211ENST00000487698 SAMD12Q8N8I0 201 aa8.26□□□□□ -1.09
SF3B1-211ENST00000487698 OR5H6Q8NGV6 325 aa8.26□□□□□ -1.09
SF3B1-211ENST00000487698 OR51E1Q8TCB6 317 aa8.26□□□□□ -1.09
SF3B1-211ENST00000487698 SLC7A6Q92536 515 aa8.26□□□□□ -1.09
SF3B1-211ENST00000487698 ABHD17AQ96GS6 310 aa8.26□□□□□ -1.09
SF3B1-211ENST00000487698 OR2H1Q9GZK4 316 aa8.26□□□□□ -1.09
SF3B1-211ENST00000487698 WNT5BQ9H1J7 359 aa8.26□□□□□ -1.09
SF3B1-211ENST00000487698 PPP1R3EQ9H7J1 279 aa8.26□□□□□ -1.09
SF3B1-211ENST00000487698 CYSLTR2Q9NS75 346 aa8.26□□□□□ -1.09
SF3B1-211ENST00000487698 ZNF275Q9NSD4 429 aaPredicted RBP8.26□□□□□ -1.09
SF3B1-211ENST00000487698 ADAM30Q9UKF2 790 aa8.26□□□□□ -1.09
SF3B1-211ENST00000487698 TIMM10BQ9Y5J6 103 aa8.26□□□□□ -1.09
SF3B1-211ENST00000487698 BSNQ9UPA5 3926 aa8.26□□□□□ -1.09
SF3B1-211ENST00000487698 A0A0U1RQV5 110 aa8.26□□□□□ -1.09
SF3B1-211ENST00000487698 C5orf63A6NC05 138 aa8.26□□□□□ -1.09
SF3B1-211ENST00000487698 FABP12A6NFH5 140 aa8.26□□□□□ -1.09
SF3B1-211ENST00000487698 E9PLN8 166 aa8.26□□□□□ -1.09
SF3B1-211ENST00000487698 M0R135 149 aa8.26□□□□□ -1.09
SF3B1-211ENST00000487698 SYT7O43581 403 aa8.26□□□□□ -1.09
SF3B1-211ENST00000487698 FARS2O95363 451 aaKnown RBP8.26□□□□□ -1.09
SF3B1-211ENST00000487698 APOC1P02654 83 aa8.26□□□□□ -1.09
SF3B1-211ENST00000487698 MAS1P04201 325 aa8.26□□□□□ -1.09
SF3B1-211ENST00000487698 DBHP09172 617 aa8.26□□□□□ -1.09
SF3B1-211ENST00000487698 PATE4P0C8F1 98 aa8.26□□□□□ -1.09
SF3B1-211ENST00000487698 SNRPBP14678 240 aaKnown RBP8.26□□□□□ -1.09
SF3B1-211ENST00000487698 PTBP1P26599 531 aaKnown RBP eCLIP8.26□□□□□ -1.09
SF3B1-211ENST00000487698 ACSF3Q4G176 576 aaPredicted RBP8.26□□□□□ -1.09
SF3B1-211ENST00000487698 HES5Q5TA89 166 aa8.26□□□□□ -1.09
SF3B1-211ENST00000487698 STEAP3Q658P3 488 aa8.26□□□□□ -1.09
SF3B1-211ENST00000487698 XKRXQ6PP77 449 aa8.26□□□□□ -1.09
SF3B1-211ENST00000487698 FAM131AQ6UXB0 335 aa8.26□□□□□ -1.09
SF3B1-211ENST00000487698 FAM57BQ71RH2 274 aa8.26□□□□□ -1.09
SF3B1-211ENST00000487698 PLPP7Q8NBV4 271 aa8.26□□□□□ -1.09
SF3B1-211ENST00000487698 DNAAF1Q8NEP3 725 aa8.26□□□□□ -1.09
SF3B1-211ENST00000487698 OR1J2Q8NGS2 313 aa8.26□□□□□ -1.09
SF3B1-211ENST00000487698 OR1F12Q8NHA8 337 aa8.26□□□□□ -1.09
SF3B1-211ENST00000487698 LGALS14Q8TCE9 139 aa8.26□□□□□ -1.09
SF3B1-211ENST00000487698 CHPT1Q8WUD6 406 aa8.26□□□□□ -1.09
SF3B1-211ENST00000487698 SPTSSAQ969W0 71 aa8.26□□□□□ -1.09
SF3B1-211ENST00000487698 ZNF799Q96GE5 643 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms