RNA–Protein interactions for RNA: ENST00000486960.5

SF1-217, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-217ENST00000486960 MGAT4AQ9UM21 535 aa4.84□□□□□ -1.63
SF1-217ENST00000486960 YARS2Q9Y2Z4 477 aaKnown RBP4.84□□□□□ -1.63
SF1-217ENST00000486960 NSG2Q9Y328 171 aa4.84□□□□□ -1.63
SF1-217ENST00000486960 SLC6A5Q9Y345 797 aa4.84□□□□□ -1.63
SF1-217ENST00000486960 HES2Q9Y543 173 aa4.84□□□□□ -1.63
SF1-217ENST00000486960 ASB4Q9Y574 426 aa4.84□□□□□ -1.63
SF1-217ENST00000486960 ETV7Q9Y603 341 aa4.84□□□□□ -1.63
SF1-217ENST00000486960 RP1P56715 2156 aa4.84□□□□□ -1.64
SF1-217ENST00000486960 A0A1B0GUS0 222 aa4.83□□□□□ -1.64
SF1-217ENST00000486960 FAM95CA0A1B0GW59 222 aa4.83□□□□□ -1.64
SF1-217ENST00000486960 ATP6AP2A0A1C7CYW4 349 aa4.83□□□□□ -1.64
SF1-217ENST00000486960 PQLC2LA1A4F0 135 aa4.83□□□□□ -1.64
SF1-217ENST00000486960 GRID2IPA4D2P6 1211 aa4.83□□□□□ -1.64
SF1-217ENST00000486960 OR11H12B2RN74 326 aa4.83□□□□□ -1.64
SF1-217ENST00000486960 NEDD8-MDP1E9PL57 170 aa4.83□□□□□ -1.64
SF1-217ENST00000486960 IMPA2O14732 288 aa4.83□□□□□ -1.64
SF1-217ENST00000486960 UBDO15205 165 aa4.83□□□□□ -1.64
SF1-217ENST00000486960 ZNF749O43361 778 aa4.83□□□□□ -1.64
SF1-217ENST00000486960 SSNA1O43805 119 aa4.83□□□□□ -1.64
SF1-217ENST00000486960 RAD1O60671 282 aa4.83□□□□□ -1.64
SF1-217ENST00000486960 MT-ND4P03905 459 aa4.83□□□□□ -1.64
SF1-217ENST00000486960 IGF1P05019 195 aa4.83□□□□□ -1.64
SF1-217ENST00000486960 RBP1P09455 135 aa4.83□□□□□ -1.64
SF1-217ENST00000486960 H2BFMP0C1H6 154 aa4.83□□□□□ -1.64
SF1-217ENST00000486960 SMIM6P0DI80 62 aa4.83□□□□□ -1.64
SF1-217ENST00000486960 C8orf88P0DMB2 117 aa4.83□□□□□ -1.64
SF1-217ENST00000486960 FASP25445 335 aa4.83□□□□□ -1.64
SF1-217ENST00000486960 DDOSTP39656 456 aa4.83□□□□□ -1.64
SF1-217ENST00000486960 RPL5P46777 297 aaKnown RBP4.83□□□□□ -1.64
SF1-217ENST00000486960 GCLMP48507 274 aa4.83□□□□□ -1.64
SF1-217ENST00000486960 TTPAP49638 278 aa4.83□□□□□ -1.64
SF1-217ENST00000486960 MEOX2P50222 304 aa4.83□□□□□ -1.64
SF1-217ENST00000486960 RAB13P51153 203 aa4.83□□□□□ -1.64
SF1-217ENST00000486960 VAMP7P51809 220 aa4.83□□□□□ -1.64
SF1-217ENST00000486960 FUT6P51993 359 aa4.83□□□□□ -1.64
SF1-217ENST00000486960 MLLT10P55197 1068 aa4.83□□□□□ -1.64
SF1-217ENST00000486960 RHOAP61586 193 aa4.83□□□□□ -1.64
SF1-217ENST00000486960 RPS15AP62244 130 aaKnown RBP4.83□□□□□ -1.64
SF1-217ENST00000486960 ADAM8P78325 824 aa4.83□□□□□ -1.64
SF1-217ENST00000486960 OC90Q02509 493 aaPredicted RBP4.83□□□□□ -1.64
SF1-217ENST00000486960 KLRB1Q12918 225 aa4.83□□□□□ -1.64
SF1-217ENST00000486960 ELAVL2Q12926 359 aaKnown RBP4.83□□□□□ -1.64
SF1-217ENST00000486960 GPR17Q13304 367 aa4.83□□□□□ -1.64
SF1-217ENST00000486960 KIR3DS1Q14943 382 aa4.83□□□□□ -1.64
SF1-217ENST00000486960 NUMA1Q14980 2115 aa4.83□□□□□ -1.64
SF1-217ENST00000486960 MAD2L1BPQ15013 274 aaPredicted RBP4.83□□□□□ -1.64
SF1-217ENST00000486960 ZNF77Q15935 545 aa4.83□□□□□ -1.64
SF1-217ENST00000486960 RPEL1Q2QD12 228 aa4.83□□□□□ -1.64
SF1-217ENST00000486960 ZNF542PQ5EBM4 170 aa4.83□□□□□ -1.64
SF1-217ENST00000486960 SOHLH1Q5JUK2 328 aa4.83□□□□□ -1.64
SF1-217ENST00000486960 SAXO2Q658L1 398 aa4.83□□□□□ -1.64
SF1-217ENST00000486960 NIPAL1Q6NVV3 410 aa4.83□□□□□ -1.64
SF1-217ENST00000486960 CD300LDQ6UXZ3 194 aa4.83□□□□□ -1.64
SF1-217ENST00000486960 RPTNQ6XPR3 784 aa4.83□□□□□ -1.64
SF1-217ENST00000486960 SLC16A12Q6ZSM3 486 aa4.83□□□□□ -1.64
SF1-217ENST00000486960 GDPD3Q7L5L3 318 aa4.83□□□□□ -1.64
SF1-217ENST00000486960 SLC29A4Q7RTT9 530 aa4.83□□□□□ -1.64
SF1-217ENST00000486960 FAM220AQ7Z4H9 259 aa4.83□□□□□ -1.64
SF1-217ENST00000486960 ANKRD37Q7Z713 158 aa4.83□□□□□ -1.64
SF1-217ENST00000486960 CLNKQ7Z7G1 428 aa4.83□□□□□ -1.64
SF1-217ENST00000486960 PRUNE1Q86TP1 453 aa4.83□□□□□ -1.64
SF1-217ENST00000486960 COMMD2Q86X83 199 aa4.83□□□□□ -1.64
SF1-217ENST00000486960 KIRREL3Q8IZU9 778 aa4.83□□□□□ -1.64
SF1-217ENST00000486960 GPD1LQ8N335 351 aa4.83□□□□□ -1.64
SF1-217ENST00000486960 CLDN22Q8N7P3 220 aa4.83□□□□□ -1.64
SF1-217ENST00000486960 OR11H1Q8NG94 326 aa4.83□□□□□ -1.64
SF1-217ENST00000486960 OR6K6Q8NGW6 343 aa4.83□□□□□ -1.64
SF1-217ENST00000486960 OR6K3Q8NGY3 331 aa4.83□□□□□ -1.64
SF1-217ENST00000486960 OR11H2Q8NH07 326 aa4.83□□□□□ -1.64
SF1-217ENST00000486960 LYPD6BQ8NI32 183 aa4.83□□□□□ -1.64
SF1-217ENST00000486960 PLPPR1Q8TBJ4 325 aa4.83□□□□□ -1.64
SF1-217ENST00000486960 WFIKKN2Q8TEU8 576 aa4.83□□□□□ -1.64
SF1-217ENST00000486960 XAGE5Q8WWM1 108 aa4.83□□□□□ -1.64
SF1-217ENST00000486960 RERGQ96A58 199 aaPredicted RBP4.83□□□□□ -1.64
SF1-217ENST00000486960 EXOSC8Q96B26 276 aaKnown RBP4.83□□□□□ -1.64
SF1-217ENST00000486960 FLYWCH2Q96CP2 140 aaKnown RBP4.83□□□□□ -1.64
SF1-217ENST00000486960 CCDC126Q96EE4 140 aa4.83□□□□□ -1.64
SF1-217ENST00000486960 MS4A14Q96JA4 679 aa4.83□□□□□ -1.64
SF1-217ENST00000486960 POM121L2Q96KW2 1035 aa4.83□□□□□ -1.64
SF1-217ENST00000486960 SYT3Q9BQG1 590 aa4.83□□□□□ -1.64
SF1-217ENST00000486960 TCEAL7Q9BRU2 100 aa4.83□□□□□ -1.64
SF1-217ENST00000486960 TRIM51Q9BSJ1 452 aa4.83□□□□□ -1.64
SF1-217ENST00000486960 ACTR3CQ9C0K3 210 aaPredicted RBP4.83□□□□□ -1.64
SF1-217ENST00000486960 ARL6Q9H0F7 186 aa4.83□□□□□ -1.64
SF1-217ENST00000486960 MRPL18Q9H0U6 180 aaKnown RBP4.83□□□□□ -1.64
SF1-217ENST00000486960 PATZ1Q9HBE1 687 aaKnown RBP4.83□□□□□ -1.64
SF1-217ENST00000486960 BEX1Q9HBH7 125 aa4.83□□□□□ -1.64
SF1-217ENST00000486960 TMEM27Q9HBJ8 222 aa4.83□□□□□ -1.64
SF1-217ENST00000486960 POPDC2Q9HBU9 364 aa4.83□□□□□ -1.64
SF1-217ENST00000486960 ZFP64Q9NPA5 681 aa4.83□□□□□ -1.64
SF1-217ENST00000486960 DCAF13Q9NV06 445 aaKnown RBP4.83□□□□□ -1.64
SF1-217ENST00000486960 CISD1Q9NZ45 108 aaKnown RBP4.83□□□□□ -1.64
SF1-217ENST00000486960 BFARQ9NZS9 450 aa4.83□□□□□ -1.64
SF1-217ENST00000486960 RCC2Q9P258 522 aaKnown RBP4.83□□□□□ -1.64
SF1-217ENST00000486960 SLC12A6Q9UHW9 1150 aa4.83□□□□□ -1.64
SF1-217ENST00000486960 PILRAQ9UKJ1 303 aa4.83□□□□□ -1.64
SF1-217ENST00000486960 TP53TG5Q9Y2B4 290 aa4.83□□□□□ -1.64
SF1-217ENST00000486960 GOLT1BQ9Y3E0 138 aa4.83□□□□□ -1.64
SF1-217ENST00000486960 TMED3Q9Y3Q3 217 aa4.83□□□□□ -1.64
SF1-217ENST00000486960 MYOFQ9NZM1 2061 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms