RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 DHRS7BQ6IAN0 325 aaPredicted RBP5.94□□□□□ -1.46
HDAC3-209ENST00000486618 ZFP1Q6P2D0 407 aa5.94□□□□□ -1.46
HDAC3-209ENST00000486618 ZNF562Q6V9R5 426 aa5.94□□□□□ -1.46
HDAC3-209ENST00000486618 CTAGE3PQ8IX95 158 aa5.94□□□□□ -1.46
HDAC3-209ENST00000486618 AQP12AQ8IXF9 295 aa5.94□□□□□ -1.46
HDAC3-209ENST00000486618 ZFP82Q8N141 532 aa5.94□□□□□ -1.46
HDAC3-209ENST00000486618 RNF175Q8N4F7 328 aa5.94□□□□□ -1.46
HDAC3-209ENST00000486618 SPATA6LQ8N4H0 392 aa5.94□□□□□ -1.46
HDAC3-209ENST00000486618 CCDC71LQ8N9Z2 235 aa5.94□□□□□ -1.46
HDAC3-209ENST00000486618 OR10A7Q8NGE5 316 aa5.94□□□□□ -1.46
HDAC3-209ENST00000486618 NANPQ8TBE9 248 aa5.94□□□□□ -1.46
HDAC3-209ENST00000486618 PYROXD1Q8WU10 500 aa5.94□□□□□ -1.46
HDAC3-209ENST00000486618 CHPT1Q8WUD6 406 aa5.94□□□□□ -1.46
HDAC3-209ENST00000486618 CNOT9Q92600 299 aaKnown RBP5.94□□□□□ -1.46
HDAC3-209ENST00000486618 TMBIM1Q969X1 311 aa5.94□□□□□ -1.46
HDAC3-209ENST00000486618 MOAP1Q96BY2 351 aa5.94□□□□□ -1.46
HDAC3-209ENST00000486618 SGTBQ96EQ0 304 aa5.94□□□□□ -1.46
HDAC3-209ENST00000486618 COQ2Q96H96 371 aa5.94□□□□□ -1.46
HDAC3-209ENST00000486618 GMPPAQ96IJ6 420 aaPredicted RBP5.94□□□□□ -1.46
HDAC3-209ENST00000486618 MS4A14Q96JA4 679 aa5.94□□□□□ -1.46
HDAC3-209ENST00000486618 TNFRSF13CQ96RJ3 184 aa5.94□□□□□ -1.46
HDAC3-209ENST00000486618 RAB40CQ96S21 281 aa5.94□□□□□ -1.46
HDAC3-209ENST00000486618 SERPINI1Q99574 410 aa5.94□□□□□ -1.46
HDAC3-209ENST00000486618 NPAS1Q99742 590 aa5.94□□□□□ -1.46
HDAC3-209ENST00000486618 HDHD5Q9BXW7 423 aa5.94□□□□□ -1.46
HDAC3-209ENST00000486618 ZNF717Q9BY31 904 aaPredicted RBP5.94□□□□□ -1.46
HDAC3-209ENST00000486618 KRTAP4-11Q9BYQ6 195 aa5.94□□□□□ -1.46
HDAC3-209ENST00000486618 ACTR6Q9GZN1 396 aa5.94□□□□□ -1.46
HDAC3-209ENST00000486618 CDIP1Q9H305 208 aa5.94□□□□□ -1.46
HDAC3-209ENST00000486618 WDR55Q9H6Y2 383 aaPredicted RBP5.94□□□□□ -1.46
HDAC3-209ENST00000486618 PTGES2Q9H7Z7 377 aa5.94□□□□□ -1.46
HDAC3-209ENST00000486618 NUDT4Q9NZJ9 180 aa5.94□□□□□ -1.46
HDAC3-209ENST00000486618 PPP4R1LQ9P1A2 415 aa5.94□□□□□ -1.46
HDAC3-209ENST00000486618 PPP1R3CQ9UQK1 317 aa5.94□□□□□ -1.46
HDAC3-209ENST00000486618 RCE1Q9Y256 329 aa5.94□□□□□ -1.46
HDAC3-209ENST00000486618 PRELID3BQ9Y3B1 194 aa5.94□□□□□ -1.46
HDAC3-209ENST00000486618 A0A1W2PS29 197 aa5.93□□□□□ -1.46
HDAC3-209ENST00000486618 C1orf226A1L170 272 aa5.93□□□□□ -1.46
HDAC3-209ENST00000486618 LINC00587B1AMM8 73 aa5.93□□□□□ -1.46
HDAC3-209ENST00000486618 MCIDASD6RGH6 385 aa5.93□□□□□ -1.46
HDAC3-209ENST00000486618 UBFD1O14562 309 aaKnown RBP5.93□□□□□ -1.46
HDAC3-209ENST00000486618 RBMXL2O75526 392 aaKnown RBP5.93□□□□□ -1.46
HDAC3-209ENST00000486618 VAMP5O95183 116 aa5.93□□□□□ -1.46
HDAC3-209ENST00000486618 FADS2O95864 444 aaKnown RBP5.93□□□□□ -1.46
HDAC3-209ENST00000486618 ATP1B1P05026 303 aa5.93□□□□□ -1.46
HDAC3-209ENST00000486618 MELTFP08582 738 aa5.93□□□□□ -1.46
HDAC3-209ENST00000486618 CELA3BP08861 270 aa5.93□□□□□ -1.46
HDAC3-209ENST00000486618 ACADSP16219 412 aa5.93□□□□□ -1.46
HDAC3-209ENST00000486618 SLC25A16P16260 332 aa5.93□□□□□ -1.46
HDAC3-209ENST00000486618 TCP1P17987 556 aaKnown RBP5.93□□□□□ -1.46
HDAC3-209ENST00000486618 SRD5A1P18405 259 aa5.93□□□□□ -1.46
HDAC3-209ENST00000486618 CSNK2A2P19784 350 aaPredicted RBP5.93□□□□□ -1.46
HDAC3-209ENST00000486618 PSMB1P20618 241 aaKnown RBP5.93□□□□□ -1.46
HDAC3-209ENST00000486618 FPR2P25090 351 aa5.93□□□□□ -1.46
HDAC3-209ENST00000486618 S100PP25815 95 aa5.93□□□□□ -1.46
HDAC3-209ENST00000486618 SPRP35270 261 aaPredicted RBP5.93□□□□□ -1.46
HDAC3-209ENST00000486618 MRPL19P49406 292 aaKnown RBP5.93□□□□□ -1.46
HDAC3-209ENST00000486618 RGS6P49758 472 aa5.93□□□□□ -1.46
HDAC3-209ENST00000486618 F2RL1P55085 397 aa5.93□□□□□ -1.46
HDAC3-209ENST00000486618 UCP3P55916 312 aa5.93□□□□□ -1.46
HDAC3-209ENST00000486618 CLDN15P56746 228 aa5.93□□□□□ -1.46
HDAC3-209ENST00000486618 ERVS71-1P61550 626 aa5.93□□□□□ -1.46
HDAC3-209ENST00000486618 ADARB1P78563 741 aaKnown RBP5.93□□□□□ -1.46
HDAC3-209ENST00000486618 VLDLRP98155 873 aa5.93□□□□□ -1.46
HDAC3-209ENST00000486618 LOXL1Q08397 574 aaPredicted RBP5.93□□□□□ -1.46
HDAC3-209ENST00000486618 ACSM2AQ08AH3 577 aa5.93□□□□□ -1.46
HDAC3-209ENST00000486618 MED21Q13503 144 aa5.93□□□□□ -1.46
HDAC3-209ENST00000486618 EXOSC7Q15024 291 aaKnown RBP5.93□□□□□ -1.46
HDAC3-209ENST00000486618 OR4D1Q15615 310 aa5.93□□□□□ -1.46
HDAC3-209ENST00000486618 GLYR1Q49A26 553 aaPredicted RBP5.93□□□□□ -1.46
HDAC3-209ENST00000486618 COX19Q49B96 90 aa5.93□□□□□ -1.46
HDAC3-209ENST00000486618 PAN3Q58A45 887 aaKnown RBP5.93□□□□□ -1.46
HDAC3-209ENST00000486618 RUNDC3AQ59EK9 446 aa5.93□□□□□ -1.46
HDAC3-209ENST00000486618 NCMAPQ5T1S8 102 aa5.93□□□□□ -1.46
HDAC3-209ENST00000486618 ACSM2BQ68CK6 577 aa5.93□□□□□ -1.46
HDAC3-209ENST00000486618 CYB5R2Q6BCY4 276 aa5.93□□□□□ -1.46
HDAC3-209ENST00000486618 ASPHD2Q6ICH7 369 aa5.93□□□□□ -1.46
HDAC3-209ENST00000486618 ULK3Q6PHR2 472 aa5.93□□□□□ -1.46
HDAC3-209ENST00000486618 TMEM107Q6UX40 140 aa5.93□□□□□ -1.46
HDAC3-209ENST00000486618 LARP4Q71RC2 724 aaKnown RBP eCLIP5.93□□□□□ -1.46
HDAC3-209ENST00000486618 ZNF546Q86UE3 836 aa5.93□□□□□ -1.46
HDAC3-209ENST00000486618 MYPOPQ86VE0 399 aaPredicted RBP5.93□□□□□ -1.46
HDAC3-209ENST00000486618 TMEM17Q86X19 198 aa5.93□□□□□ -1.46
HDAC3-209ENST00000486618 DHFR2Q86XF0 187 aa5.93□□□□□ -1.46
HDAC3-209ENST00000486618 KLBQ86Z14 1044 aa5.93□□□□□ -1.46
HDAC3-209ENST00000486618 Q8N1Y9 231 aa5.93□□□□□ -1.46
HDAC3-209ENST00000486618 FBXO36Q8NEA4 188 aa5.93□□□□□ -1.46
HDAC3-209ENST00000486618 OR4D10Q8NGI6 311 aa5.93□□□□□ -1.46
HDAC3-209ENST00000486618 FAM110DQ8TAY7 271 aaPredicted RBP5.93□□□□□ -1.46
HDAC3-209ENST00000486618 ACTRT1Q8TDG2 376 aa5.93□□□□□ -1.46
HDAC3-209ENST00000486618 RNF133Q8WVZ7 376 aa5.93□□□□□ -1.46
HDAC3-209ENST00000486618 MARS2Q96GW9 593 aaKnown RBP5.93□□□□□ -1.46
HDAC3-209ENST00000486618 AKR1E2Q96JD6 320 aa5.93□□□□□ -1.46
HDAC3-209ENST00000486618 ADOQ96SZ5 270 aa5.93□□□□□ -1.46
HDAC3-209ENST00000486618 SLC30A2Q9BRI3 323 aa5.93□□□□□ -1.46
HDAC3-209ENST00000486618 ZNF2Q9BSG1 426 aaPredicted RBP5.93□□□□□ -1.46
HDAC3-209ENST00000486618 ST6GALNAC5Q9BVH7 336 aa5.93□□□□□ -1.46
HDAC3-209ENST00000486618 CTDSP1Q9GZU7 261 aa5.93□□□□□ -1.46
HDAC3-209ENST00000486618 DSN1Q9H410 356 aa5.93□□□□□ -1.46
HDAC3-209ENST00000486618 PLAC1Q9HBJ0 212 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms