RNA–Protein interactions for RNA: ENST00000483941.1

SMAD9-204, Transcript of SMAD family member 9, humanhuman

TSL 3

Gene SMAD9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-204ENST00000483941 DMKNQ6E0U4 476 aaPredicted RBP12.22□□□□□ -0.45
SMAD9-204ENST00000483941 C3P1Q6ZMU1 363 aa12.22□□□□□ -0.45
SMAD9-204ENST00000483941 ZNF704Q6ZNC4 412 aaPredicted RBP12.22□□□□□ -0.45
SMAD9-204ENST00000483941 CFAP77Q6ZQR2 320 aa12.22□□□□□ -0.45
SMAD9-204ENST00000483941 GABRG1Q8N1C3 465 aa12.22□□□□□ -0.45
SMAD9-204ENST00000483941 RFLNBQ8N5W9 214 aa12.22□□□□□ -0.45
SMAD9-204ENST00000483941 ZNF433Q8N7K0 673 aaPredicted RBP12.22□□□□□ -0.45
SMAD9-204ENST00000483941 ZNF610Q8N9Z0 462 aa12.22□□□□□ -0.45
SMAD9-204ENST00000483941 OR1F12Q8NHA8 337 aa12.22□□□□□ -0.45
SMAD9-204ENST00000483941 DCLRE1CQ96SD1 692 aaKnown RBP12.22□□□□□ -0.45
SMAD9-204ENST00000483941 OR2H1Q9GZK4 316 aa12.22□□□□□ -0.45
SMAD9-204ENST00000483941 COQ3Q9NZJ6 369 aa12.22□□□□□ -0.45
SMAD9-204ENST00000483941 ENPP5Q9UJA9 477 aa12.22□□□□□ -0.45
SMAD9-204ENST00000483941 CEPT1Q9Y6K0 416 aa12.22□□□□□ -0.45
SMAD9-204ENST00000483941 A0A096LPE4 126 aa12.21□□□□□ -0.45
SMAD9-204ENST00000483941 A0A0G2JNJ9 132 aa12.21□□□□□ -0.45
SMAD9-204ENST00000483941 A0A1W2PPZ6 126 aa12.21□□□□□ -0.45
SMAD9-204ENST00000483941 LOC110117498-PIK3R3F6TDL0 507 aa12.21□□□□□ -0.45
SMAD9-204ENST00000483941 H3BSA7 217 aa12.21□□□□□ -0.45
SMAD9-204ENST00000483941 PSMD9O00233 223 aa12.21□□□□□ -0.45
SMAD9-204ENST00000483941 SLC22A1O15245 554 aa12.21□□□□□ -0.45
SMAD9-204ENST00000483941 DOK2O60496 412 aa12.21□□□□□ -0.45
SMAD9-204ENST00000483941 GABARAPO95166 117 aa12.21□□□□□ -0.45
SMAD9-204ENST00000483941 CD79AP11912 226 aa12.21□□□□□ -0.45
SMAD9-204ENST00000483941 ZNF32P17041 273 aa12.21□□□□□ -0.45
SMAD9-204ENST00000483941 IL32P24001 234 aa12.21□□□□□ -0.45
SMAD9-204ENST00000483941 CD79BP40259 229 aa12.21□□□□□ -0.45
SMAD9-204ENST00000483941 GDI2P50395 445 aaKnown RBP12.21□□□□□ -0.45
SMAD9-204ENST00000483941 PSMA6P60900 246 aaKnown RBP12.21□□□□□ -0.45
SMAD9-204ENST00000483941 TBRG1Q3YBR2 411 aa12.21□□□□□ -0.45
SMAD9-204ENST00000483941 YIF1BQ5BJH7 314 aa12.21□□□□□ -0.45
SMAD9-204ENST00000483941 SFRP5Q5T4F7 317 aa12.21□□□□□ -0.45
SMAD9-204ENST00000483941 C9orf135Q5VTT2 229 aa12.21□□□□□ -0.45
SMAD9-204ENST00000483941 ARL9Q6T311 187 aa12.21□□□□□ -0.45
SMAD9-204ENST00000483941 DRAM2Q6UX65 266 aa12.21□□□□□ -0.45
SMAD9-204ENST00000483941 SPATC1Q76KD6 591 aa12.21□□□□□ -0.45
SMAD9-204ENST00000483941 FJX1Q86VR8 437 aa12.21□□□□□ -0.45
SMAD9-204ENST00000483941 CCDC54Q8NEL0 328 aa12.21□□□□□ -0.45
SMAD9-204ENST00000483941 STEAP2Q8NFT2 490 aa12.21□□□□□ -0.45
SMAD9-204ENST00000483941 OR2G2Q8NGZ5 317 aa12.21□□□□□ -0.45
SMAD9-204ENST00000483941 OR5AK2Q8NH90 309 aa12.21□□□□□ -0.45
SMAD9-204ENST00000483941 ASB5Q8WWX0 329 aa12.21□□□□□ -0.45
SMAD9-204ENST00000483941 ITFG2Q969R8 447 aa12.21□□□□□ -0.45
SMAD9-204ENST00000483941 DMRTA2Q96SC8 542 aa12.21□□□□□ -0.45
SMAD9-204ENST00000483941 AMELYQ99218 206 aa12.21□□□□□ -0.45
SMAD9-204ENST00000483941 TTTY10Q9BZA0 68 aa12.21□□□□□ -0.45
SMAD9-204ENST00000483941 OR10A4Q9H209 315 aa12.21□□□□□ -0.45
SMAD9-204ENST00000483941 Q9UFV3 132 aa12.21□□□□□ -0.45
SMAD9-204ENST00000483941 SH3BGRL2Q9UJC5 107 aa12.21□□□□□ -0.45
SMAD9-204ENST00000483941 ITGB1BP2Q9UKP3 347 aa12.21□□□□□ -0.45
SMAD9-204ENST00000483941 ZNF281Q9Y2X9 895 aa12.21□□□□□ -0.45
SMAD9-204ENST00000483941 AMDHD2Q9Y303 409 aa12.21□□□□□ -0.45
SMAD9-204ENST00000483941 TRDV1A0A1B0GX56 115 aa12.2□□□□□ -0.46
SMAD9-204ENST00000483941 A8MXE2 369 aa12.2□□□□□ -0.46
SMAD9-204ENST00000483941 CCL21O00585 134 aa12.2□□□□□ -0.46
SMAD9-204ENST00000483941 SYNGR3O43761 229 aa12.2□□□□□ -0.46
SMAD9-204ENST00000483941 GATBO75879 557 aaKnown RBP12.2□□□□□ -0.46
SMAD9-204ENST00000483941 MMP7P09237 267 aaPredicted RBP12.2□□□□□ -0.46
SMAD9-204ENST00000483941 UBCP0CG48 685 aaKnown RBP12.2□□□□□ -0.46
SMAD9-204ENST00000483941 PSKH1P11801 424 aa12.2□□□□□ -0.46
SMAD9-204ENST00000483941 ZNF12P17014 697 aa12.2□□□□□ -0.46
SMAD9-204ENST00000483941 PSMB1P20618 241 aaKnown RBP12.2□□□□□ -0.46
SMAD9-204ENST00000483941 BMP5P22003 454 aa12.2□□□□□ -0.46
SMAD9-204ENST00000483941 MAPK3P27361 379 aaPredicted RBP12.2□□□□□ -0.46
SMAD9-204ENST00000483941 TGFBR2P37173 567 aa12.2□□□□□ -0.46
SMAD9-204ENST00000483941 HTR5AP47898 357 aa12.2□□□□□ -0.46
SMAD9-204ENST00000483941 GTF2A1P52655 376 aaPredicted RBP12.2□□□□□ -0.46
SMAD9-204ENST00000483941 RAB1AP62820 205 aa12.2□□□□□ -0.46
SMAD9-204ENST00000483941 PSG4Q00888 419 aa12.2□□□□□ -0.46
SMAD9-204ENST00000483941 SLC3A1Q07837 685 aa12.2□□□□□ -0.46
SMAD9-204ENST00000483941 SSX1Q16384 188 aa12.2□□□□□ -0.46
SMAD9-204ENST00000483941 GABRA6Q16445 453 aa12.2□□□□□ -0.46
SMAD9-204ENST00000483941 GSG1Q2KHT4 349 aa12.2□□□□□ -0.46
SMAD9-204ENST00000483941 SLC25A35Q3KQZ1 300 aa12.2□□□□□ -0.46
SMAD9-204ENST00000483941 CCDC92Q53HC0 331 aaPredicted RBP12.2□□□□□ -0.46
SMAD9-204ENST00000483941 BCL2L15Q5TBC7 163 aa12.2□□□□□ -0.46
SMAD9-204ENST00000483941 TMEM244Q5VVB8 128 aa12.2□□□□□ -0.46
SMAD9-204ENST00000483941 UNQ6126/PRO20091Q6UXV3 157 aa12.2□□□□□ -0.46
SMAD9-204ENST00000483941 BHLHA15Q7RTS1 189 aaPredicted RBP12.2□□□□□ -0.46
SMAD9-204ENST00000483941 ZNF283Q8N7M2 679 aa12.2□□□□□ -0.46
SMAD9-204ENST00000483941 ZNF676Q8N7Q3 588 aa12.2□□□□□ -0.46
SMAD9-204ENST00000483941 NAXEQ8NCW5 288 aa12.2□□□□□ -0.46
SMAD9-204ENST00000483941 OR52H1Q8NGJ2 320 aa12.2□□□□□ -0.46
SMAD9-204ENST00000483941 OR1J2Q8NGS2 313 aa12.2□□□□□ -0.46
SMAD9-204ENST00000483941 GHSRQ92847 366 aa12.2□□□□□ -0.46
SMAD9-204ENST00000483941 ISOC1Q96CN7 298 aa12.2□□□□□ -0.46
SMAD9-204ENST00000483941 DOK1Q99704 481 aa12.2□□□□□ -0.46
SMAD9-204ENST00000483941 RBM38Q9H0Z9 239 aaKnown RBP12.2□□□□□ -0.46
SMAD9-204ENST00000483941 OPN3Q9H1Y3 402 aaPredicted RBP12.2□□□□□ -0.46
SMAD9-204ENST00000483941 PNRC2Q9NPJ4 139 aaKnown RBP12.2□□□□□ -0.46
SMAD9-204ENST00000483941 ST6GALNAC2Q9UJ37 374 aa12.2□□□□□ -0.46
SMAD9-204ENST00000483941 ZNF391Q9UJN7 358 aa12.2□□□□□ -0.46
SMAD9-204ENST00000483941 MED12LQ86YW9 2145 aa12.2□□□□□ -0.46
SMAD9-204ENST00000483941 NIPBLQ6KC79 2804 aaeCLIP12.19□□□□□ -0.46
SMAD9-204ENST00000483941 MYO7BQ6PIF6 2116 aa12.19□□□□□ -0.46
SMAD9-204ENST00000483941 DOCK7Q96N67 2140 aa12.19□□□□□ -0.46
SMAD9-204ENST00000483941 EEF1E1-BLOC1S5C9J1V9 151 aa12.19□□□□□ -0.46
SMAD9-204ENST00000483941 E9PI62 339 aa12.19□□□□□ -0.46
SMAD9-204ENST00000483941 MAGEB4O15481 346 aaPredicted RBP12.19□□□□□ -0.46
SMAD9-204ENST00000483941 EEF1E1O43324 174 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms