RNA–Protein interactions for RNA: ENST00000483002.1

RAB11FIP3-209, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 4

Gene RAB11FIP3, Length 585 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-209ENST00000483002 HIST2H3PS2Q5TEC6 136 aa13.9□□□□□ -0.18
RAB11FIP3-209ENST00000483002 LEG1Q6P5S2 330 aa13.9□□□□□ -0.18
RAB11FIP3-209ENST00000483002 HIST2H3AQ71DI3 136 aa13.9□□□□□ -0.18
RAB11FIP3-209ENST00000483002 DOK3Q7L591 496 aa13.9□□□□□ -0.18
RAB11FIP3-209ENST00000483002 OR6V1Q8N148 313 aa13.9□□□□□ -0.18
RAB11FIP3-209ENST00000483002 NMNAT3Q96T66 252 aa13.9□□□□□ -0.18
RAB11FIP3-209ENST00000483002 COQ7Q99807 217 aa13.9□□□□□ -0.18
RAB11FIP3-209ENST00000483002 SSBP3Q9BWW4 388 aaPredicted RBP13.9□□□□□ -0.18
RAB11FIP3-209ENST00000483002 HDHD2Q9H0R4 259 aa13.9□□□□□ -0.18
RAB11FIP3-209ENST00000483002 SAMD4AQ9UPU9 718 aaKnown RBP13.9□□□□□ -0.18
RAB11FIP3-209ENST00000483002 LRCH1Q9Y2L9 728 aa13.9□□□□□ -0.18
RAB11FIP3-209ENST00000483002 V9GYQ6 96 aa13.9□□□□□ -0.18
RAB11FIP3-209ENST00000483002 IGHV3OR16-10A0A075B7F0 116 aa13.89□□□□□ -0.19
RAB11FIP3-209ENST00000483002 IGLV1-36A0A0B4J1U3 117 aa13.89□□□□□ -0.19
RAB11FIP3-209ENST00000483002 MLNRO43193 412 aa13.89□□□□□ -0.19
RAB11FIP3-209ENST00000483002 HLA-DPB1P04440 258 aa13.89□□□□□ -0.19
RAB11FIP3-209ENST00000483002 HKR1P10072 659 aa13.89□□□□□ -0.19
RAB11FIP3-209ENST00000483002 RPS2P15880 293 aaKnown RBP13.89□□□□□ -0.19
RAB11FIP3-209ENST00000483002 PRSS12P56730 875 aa13.89□□□□□ -0.19
RAB11FIP3-209ENST00000483002 PAX8Q06710 450 aa13.89□□□□□ -0.19
RAB11FIP3-209ENST00000483002 FOXL1Q12952 345 aa13.89□□□□□ -0.19
RAB11FIP3-209ENST00000483002 BAMBIQ13145 260 aa13.89□□□□□ -0.19
RAB11FIP3-209ENST00000483002 RFX4Q33E94 735 aa13.89□□□□□ -0.19
RAB11FIP3-209ENST00000483002 PGM2L1Q6PCE3 622 aa13.89□□□□□ -0.19
RAB11FIP3-209ENST00000483002 MOGAT3Q86VF5 341 aa13.89□□□□□ -0.19
RAB11FIP3-209ENST00000483002 JAZF1Q86VZ6 243 aa13.89□□□□□ -0.19
RAB11FIP3-209ENST00000483002 LINC00346Q8IVM7 164 aa13.89□□□□□ -0.19
RAB11FIP3-209ENST00000483002 OR52E2Q8NGJ4 325 aa13.89□□□□□ -0.19
RAB11FIP3-209ENST00000483002 OR4K13Q8NH42 304 aa13.89□□□□□ -0.19
RAB11FIP3-209ENST00000483002 CMTM5Q96DZ9 223 aa13.89□□□□□ -0.19
RAB11FIP3-209ENST00000483002 PITX2Q99697 317 aa13.89□□□□□ -0.19
RAB11FIP3-209ENST00000483002 SLC30A2Q9BRI3 323 aa13.89□□□□□ -0.19
RAB11FIP3-209ENST00000483002 FUZQ9BT04 418 aa13.89□□□□□ -0.19
RAB11FIP3-209ENST00000483002 CDADC1Q9BWV3 514 aa13.89□□□□□ -0.19
RAB11FIP3-209ENST00000483002 HCAR1Q9BXC0 346 aa13.89□□□□□ -0.19
RAB11FIP3-209ENST00000483002 MS4A7Q9GZW8 240 aaPredicted RBP13.89□□□□□ -0.19
RAB11FIP3-209ENST00000483002 SPAG4Q9NPE6 437 aa13.89□□□□□ -0.19
RAB11FIP3-209ENST00000483002 TMEM100Q9NV29 134 aa13.89□□□□□ -0.19
RAB11FIP3-209ENST00000483002 MIOXQ9UGB7 285 aa13.89□□□□□ -0.19
RAB11FIP3-209ENST00000483002 DNAJC9-AS1A6NH13 148 aa13.88□□□□□ -0.19
RAB11FIP3-209ENST00000483002 LRRC30A6NM36 301 aa13.88□□□□□ -0.19
RAB11FIP3-209ENST00000483002 IQCF6A8MYZ5 107 aa13.88□□□□□ -0.19
RAB11FIP3-209ENST00000483002 F5H5K5 113 aa13.88□□□□□ -0.19
RAB11FIP3-209ENST00000483002 GADD45GO95257 159 aa13.88□□□□□ -0.19
RAB11FIP3-209ENST00000483002 RENP00797 406 aa13.88□□□□□ -0.19
RAB11FIP3-209ENST00000483002 SELEP16581 610 aa13.88□□□□□ -0.19
RAB11FIP3-209ENST00000483002 FPR3P25089 353 aa13.88□□□□□ -0.19
RAB11FIP3-209ENST00000483002 SLC6A6P31641 620 aa13.88□□□□□ -0.19
RAB11FIP3-209ENST00000483002 SMIM11AP58511 58 aa13.88□□□□□ -0.19
RAB11FIP3-209ENST00000483002 GNB2P62879 340 aa13.88□□□□□ -0.19
RAB11FIP3-209ENST00000483002 COX10Q12887 443 aa13.88□□□□□ -0.19
RAB11FIP3-209ENST00000483002 TUSC1Q2TAM9 212 aa13.88□□□□□ -0.19
RAB11FIP3-209ENST00000483002 FAM201AQ5SY85 155 aa13.88□□□□□ -0.19
RAB11FIP3-209ENST00000483002 BTNL3Q6UXE8 466 aa13.88□□□□□ -0.19
RAB11FIP3-209ENST00000483002 NAA40Q86UY6 237 aa13.88□□□□□ -0.19
RAB11FIP3-209ENST00000483002 KLBQ86Z14 1044 aa13.88□□□□□ -0.19
RAB11FIP3-209ENST00000483002 SLC26A10Q8NG04 563 aa13.88□□□□□ -0.19
RAB11FIP3-209ENST00000483002 FANK1Q8TC84 345 aa13.88□□□□□ -0.19
RAB11FIP3-209ENST00000483002 DHRS1Q96LJ7 313 aa13.88□□□□□ -0.19
RAB11FIP3-209ENST00000483002 ZNF48Q96MX3 618 aaPredicted RBP13.88□□□□□ -0.19
RAB11FIP3-209ENST00000483002 ELAC2Q9BQ52 826 aaKnown RBP13.88□□□□□ -0.19
RAB11FIP3-209ENST00000483002 TMEM246Q9BRR3 403 aa13.88□□□□□ -0.19
RAB11FIP3-209ENST00000483002 IFT27Q9BW83 186 aa13.88□□□□□ -0.19
RAB11FIP3-209ENST00000483002 OR52D1Q9H346 318 aa13.88□□□□□ -0.19
RAB11FIP3-209ENST00000483002 RPRD1BQ9NQG5 326 aaKnown RBP13.88□□□□□ -0.19
RAB11FIP3-209ENST00000483002 ARPC3O15145 178 aa13.87□□□□□ -0.19
RAB11FIP3-209ENST00000483002 HLA-DQA2P01906 255 aa13.87□□□□□ -0.19
RAB11FIP3-209ENST00000483002 IGHV4-38-2P0DP08 117 aa13.87□□□□□ -0.19
RAB11FIP3-209ENST00000483002 HIST1H1CP16403 213 aaKnown RBP13.87□□□□□ -0.19
RAB11FIP3-209ENST00000483002 NOS3P29474 1203 aa13.87□□□□□ -0.19
RAB11FIP3-209ENST00000483002 PMELP40967 661 aa13.87□□□□□ -0.19
RAB11FIP3-209ENST00000483002 SPIBQ01892 262 aa13.87□□□□□ -0.19
RAB11FIP3-209ENST00000483002 SLC18B1Q6NT16 456 aa13.87□□□□□ -0.19
RAB11FIP3-209ENST00000483002 LRRN1Q6UXK5 716 aa13.87□□□□□ -0.19
RAB11FIP3-209ENST00000483002 CFAP77Q6ZQR2 320 aa13.87□□□□□ -0.19
RAB11FIP3-209ENST00000483002 COLCA1Q6ZS62 124 aa13.87□□□□□ -0.19
RAB11FIP3-209ENST00000483002 OR2AJ1Q8NGZ0 328 aa13.87□□□□□ -0.19
RAB11FIP3-209ENST00000483002 RAB40AQ8WXH6 277 aa13.87□□□□□ -0.19
RAB11FIP3-209ENST00000483002 NEIL1Q96FI4 390 aaPredicted RBP13.87□□□□□ -0.19
RAB11FIP3-209ENST00000483002 PYURFQ96I23 114 aa13.87□□□□□ -0.19
RAB11FIP3-209ENST00000483002 PLEKHA8Q96JA3 519 aa13.87□□□□□ -0.19
RAB11FIP3-209ENST00000483002 C1orf147Q96MC9 270 aaPredicted RBP13.87□□□□□ -0.19
RAB11FIP3-209ENST00000483002 ZNF747Q9BV97 191 aa13.87□□□□□ -0.19
RAB11FIP3-209ENST00000483002 SOX21Q9Y651 276 aaPredicted RBP13.87□□□□□ -0.19
RAB11FIP3-209ENST00000483002 OR10H3O60404 316 aa13.86□□□□□ -0.19
RAB11FIP3-209ENST00000483002 LCATP04180 440 aa13.86□□□□□ -0.19
RAB11FIP3-209ENST00000483002 ACSM4P0C7M7 580 aa13.86□□□□□ -0.19
RAB11FIP3-209ENST00000483002 CPT2P23786 658 aa13.86□□□□□ -0.19
RAB11FIP3-209ENST00000483002 PAX2Q02962 417 aa13.86□□□□□ -0.19
RAB11FIP3-209ENST00000483002 GK2Q14410 553 aaPredicted RBP13.86□□□□□ -0.19
RAB11FIP3-209ENST00000483002 ZNF181Q2M3W8 571 aa13.86□□□□□ -0.19
RAB11FIP3-209ENST00000483002 SLC36A3Q495N2 470 aa13.86□□□□□ -0.19
RAB11FIP3-209ENST00000483002 C1orf87Q8N0U7 546 aa13.86□□□□□ -0.19
RAB11FIP3-209ENST00000483002 PARP8Q8N3A8 854 aa13.86□□□□□ -0.19
RAB11FIP3-209ENST00000483002 SLCO4A1Q96BD0 722 aa13.86□□□□□ -0.19
RAB11FIP3-209ENST00000483002 MYLK2Q9H1R3 596 aa13.86□□□□□ -0.19
RAB11FIP3-209ENST00000483002 FN3KQ9H479 309 aa13.86□□□□□ -0.19
RAB11FIP3-209ENST00000483002 GORASP2Q9H8Y8 452 aa13.86□□□□□ -0.19
RAB11FIP3-209ENST00000483002 IGHV2-70DA0A0C4DH43 119 aa13.85□□□□□ -0.19
RAB11FIP3-209ENST00000483002 OR6C68A6NDL8 312 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms