RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 EMC9Q9Y3B6 208 aa12.83□□□□□ -0.36
CHD3-211ENST00000481999 SPAARA0A1B0GVQ0 90 aa12.83□□□□□ -0.36
CHD3-211ENST00000481999 XRCC3O43542 346 aa12.83□□□□□ -0.36
CHD3-211ENST00000481999 LMX1BO60663 402 aa12.83□□□□□ -0.36
CHD3-211ENST00000481999 ICMTO60725 284 aa12.83□□□□□ -0.36
CHD3-211ENST00000481999 NDUFB6O95139 128 aa12.83□□□□□ -0.36
CHD3-211ENST00000481999 IL5P05113 134 aa12.83□□□□□ -0.36
CHD3-211ENST00000481999 CFPP27918 469 aa12.83□□□□□ -0.36
CHD3-211ENST00000481999 FAUP35544 74 aaKnown RBP12.83□□□□□ -0.36
CHD3-211ENST00000481999 MECP2P51608 486 aaKnown RBP12.83□□□□□ -0.36
CHD3-211ENST00000481999 LINC00303Q3SY05 128 aa12.83□□□□□ -0.36
CHD3-211ENST00000481999 ASCL5Q7RTU5 278 aa12.83□□□□□ -0.36
CHD3-211ENST00000481999 GLB1L2Q8IW92 636 aa12.83□□□□□ -0.36
CHD3-211ENST00000481999 ZNF679Q8IYX0 411 aa12.83□□□□□ -0.36
CHD3-211ENST00000481999 DEFB124Q8NES8 71 aa12.83□□□□□ -0.36
CHD3-211ENST00000481999 ASB17Q8WXJ9 295 aa12.83□□□□□ -0.36
CHD3-211ENST00000481999 C11orf40Q8WZ69 217 aa12.83□□□□□ -0.36
CHD3-211ENST00000481999 MCHR2Q969V1 340 aa12.83□□□□□ -0.36
CHD3-211ENST00000481999 ZNF385AQ96PM9 386 aaKnown RBP12.83□□□□□ -0.36
CHD3-211ENST00000481999 DPCDQ9BVM2 203 aaPredicted RBP12.83□□□□□ -0.36
CHD3-211ENST00000481999 MRPL13Q9BYD1 178 aaKnown RBP12.83□□□□□ -0.36
CHD3-211ENST00000481999 PLA2G3Q9NZ20 509 aa12.83□□□□□ -0.36
CHD3-211ENST00000481999 SNRPGP15A8MWD9 76 aa12.82□□□□□ -0.36
CHD3-211ENST00000481999 G3V3Q6 166 aa12.82□□□□□ -0.36
CHD3-211ENST00000481999 CREBL2O60519 120 aaPredicted RBP12.82□□□□□ -0.36
CHD3-211ENST00000481999 CSRP1P21291 193 aaKnown RBP12.82□□□□□ -0.36
CHD3-211ENST00000481999 CRABP1P29762 137 aa12.82□□□□□ -0.36
CHD3-211ENST00000481999 SSTR2P30874 369 aa12.82□□□□□ -0.36
CHD3-211ENST00000481999 SRSF6Q13247 344 aaKnown RBP12.82□□□□□ -0.36
CHD3-211ENST00000481999 MFSD13AQ14CX5 517 aa12.82□□□□□ -0.36
CHD3-211ENST00000481999 TRIP6Q15654 476 aaKnown RBP12.82□□□□□ -0.36
CHD3-211ENST00000481999 LRFN4Q6PJG9 635 aa12.82□□□□□ -0.36
CHD3-211ENST00000481999 TMPPEQ6ZT21 453 aa12.82□□□□□ -0.36
CHD3-211ENST00000481999 CCDC28AQ8IWP9 274 aa12.82□□□□□ -0.36
CHD3-211ENST00000481999 ELMOD2Q8IZ81 293 aa12.82□□□□□ -0.36
CHD3-211ENST00000481999 GTPBP8Q8N3Z3 284 aaPredicted RBP12.82□□□□□ -0.36
CHD3-211ENST00000481999 FTMTQ8N4E7 242 aa12.82□□□□□ -0.36
CHD3-211ENST00000481999 MEIOBQ8N635 442 aa12.82□□□□□ -0.36
CHD3-211ENST00000481999 ST7LQ8TDW4 575 aa12.82□□□□□ -0.36
CHD3-211ENST00000481999 MARVELD3Q96A59 401 aa12.82□□□□□ -0.36
CHD3-211ENST00000481999 SIGLEC12Q96PQ1 595 aa12.82□□□□□ -0.36
CHD3-211ENST00000481999 SEC22CQ9BRL7 303 aa12.82□□□□□ -0.36
CHD3-211ENST00000481999 DDA1Q9BW61 102 aa12.82□□□□□ -0.36
CHD3-211ENST00000481999 MGAT4CQ9UBM8 478 aa12.82□□□□□ -0.36
CHD3-211ENST00000481999 AUP1Q9Y679 476 aa12.82□□□□□ -0.36
CHD3-211ENST00000481999 A0A0J9YW62 118 aa12.82□□□□□ -0.36
CHD3-211ENST00000481999 RBBP9O75884 186 aa12.82□□□□□ -0.36
CHD3-211ENST00000481999 PGA4P0DJD7 388 aa12.82□□□□□ -0.36
CHD3-211ENST00000481999 PGA3P0DJD8 388 aa12.82□□□□□ -0.36
CHD3-211ENST00000481999 C4BPBP20851 252 aa12.82□□□□□ -0.36
CHD3-211ENST00000481999 PTGS2P35354 604 aa12.82□□□□□ -0.36
CHD3-211ENST00000481999 CLDN17P56750 224 aa12.82□□□□□ -0.36
CHD3-211ENST00000481999 PHYHD1Q5SRE7 291 aa12.82□□□□□ -0.36
CHD3-211ENST00000481999 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.82□□□□□ -0.36
CHD3-211ENST00000481999 OR52N5Q8NH56 324 aa12.82□□□□□ -0.36
CHD3-211ENST00000481999 TSEN15Q8WW01 171 aaKnown RBP12.82□□□□□ -0.36
CHD3-211ENST00000481999 SRXN1Q9BYN0 137 aa12.82□□□□□ -0.36
CHD3-211ENST00000481999 TAS2R8Q9NYW2 309 aa12.82□□□□□ -0.36
CHD3-211ENST00000481999 ZNF69Q9UC07 566 aa12.82□□□□□ -0.36
CHD3-211ENST00000481999 CDV3Q9UKY7 258 aaKnown RBP12.82□□□□□ -0.36
CHD3-211ENST00000481999 A0A1W2PNV4 684 aa12.81□□□□□ -0.36
CHD3-211ENST00000481999 LRRC3CA6NJW4 275 aa12.81□□□□□ -0.36
CHD3-211ENST00000481999 H7C417 338 aa12.81□□□□□ -0.36
CHD3-211ENST00000481999 TRAPPC6AO75865 159 aa12.81□□□□□ -0.36
CHD3-211ENST00000481999 SNAPC5O75971 98 aa12.81□□□□□ -0.36
CHD3-211ENST00000481999 TOXO94900 526 aa12.81□□□□□ -0.36
CHD3-211ENST00000481999 GIPP09681 153 aaPredicted RBP12.81□□□□□ -0.36
CHD3-211ENST00000481999 TMIGD3P0DMS9 266 aaPredicted RBP12.81□□□□□ -0.36
CHD3-211ENST00000481999 ZNF823P16415 610 aa12.81□□□□□ -0.36
CHD3-211ENST00000481999 ZNF43P17038 809 aa12.81□□□□□ -0.36
CHD3-211ENST00000481999 CLRN1P58418 232 aa12.81□□□□□ -0.36
CHD3-211ENST00000481999 RSPO4Q2I0M5 234 aaPredicted RBP12.81□□□□□ -0.36
CHD3-211ENST00000481999 WIPI1Q5MNZ9 446 aaPredicted RBP12.81□□□□□ -0.36
CHD3-211ENST00000481999 FAAP20Q6NZ36 180 aa12.81□□□□□ -0.36
CHD3-211ENST00000481999 ANKRD16Q6P6B7 361 aa12.81□□□□□ -0.36
CHD3-211ENST00000481999 CFAP77Q6ZQR2 320 aa12.81□□□□□ -0.36
CHD3-211ENST00000481999 LINC00696Q6ZRV3 163 aa12.81□□□□□ -0.36
CHD3-211ENST00000481999 OR10S1Q8NGN2 331 aa12.81□□□□□ -0.36
CHD3-211ENST00000481999 MTFP1Q9UDX5 166 aa12.81□□□□□ -0.36
CHD3-211ENST00000481999 UBQLN2Q9UHD9 624 aa12.81□□□□□ -0.36
CHD3-211ENST00000481999 CCDC187A0A096LP49 1063 aa12.81□□□□□ -0.36
CHD3-211ENST00000481999 MPC2O95563 127 aa12.81□□□□□ -0.36
CHD3-211ENST00000481999 CRYZL1O95825 349 aa12.81□□□□□ -0.36
CHD3-211ENST00000481999 HPP00738 406 aa12.81□□□□□ -0.36
CHD3-211ENST00000481999 ALDOBP05062 364 aa12.81□□□□□ -0.36
CHD3-211ENST00000481999 SLC2A1P11166 492 aa12.81□□□□□ -0.36
CHD3-211ENST00000481999 DSCR4P56555 118 aaPredicted RBP12.81□□□□□ -0.36
CHD3-211ENST00000481999 TSPAN5P62079 268 aa12.81□□□□□ -0.36
CHD3-211ENST00000481999 EXOSC2Q13868 293 aaKnown RBP12.81□□□□□ -0.36
CHD3-211ENST00000481999 ZNF626Q68DY1 528 aa12.81□□□□□ -0.36
CHD3-211ENST00000481999 OR6S1Q8NH40 331 aa12.81□□□□□ -0.36
CHD3-211ENST00000481999 ZBTB8AQ96BR9 441 aa12.81□□□□□ -0.36
CHD3-211ENST00000481999 ZNF837Q96EG3 531 aaPredicted RBP12.81□□□□□ -0.36
CHD3-211ENST00000481999 CHIAQ9BZP6 476 aa12.81□□□□□ -0.36
CHD3-211ENST00000481999 FREM1Q5H8C1 2179 aa12.81□□□□□ -0.36
CHD3-211ENST00000481999 GGT3PA6NGU5 568 aa12.8□□□□□ -0.36
CHD3-211ENST00000481999 A6NIZ1 184 aa12.8□□□□□ -0.36
CHD3-211ENST00000481999 AQP7P3A6NL99 342 aa12.8□□□□□ -0.36
CHD3-211ENST00000481999 M0R233 179 aa12.8□□□□□ -0.36
CHD3-211ENST00000481999 P04436 131 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms