RNA–Protein interactions for RNA: ENST00000478769.1

NUDCD3-207, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 315 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-207ENST00000478769 IKZF2Q9UKS7 526 aa11.69□□□□□ -0.54
NUDCD3-207ENST00000478769 DIMT1Q9UNQ2 313 aaKnown RBP11.69□□□□□ -0.54
NUDCD3-207ENST00000478769 GRIP1Q9Y3R0 1128 aa11.69□□□□□ -0.54
NUDCD3-207ENST00000478769 PCDHGB1Q9Y5G3 927 aa11.69□□□□□ -0.54
NUDCD3-207ENST00000478769 CSMD2Q7Z408 3487 aa11.69□□□□□ -0.54
NUDCD3-207ENST00000478769 DAPL1A0PJW8 107 aa11.68□□□□□ -0.54
NUDCD3-207ENST00000478769 IRGMA1A4Y4 181 aa11.68□□□□□ -0.54
NUDCD3-207ENST00000478769 C5orf63A6NC05 138 aa11.68□□□□□ -0.54
NUDCD3-207ENST00000478769 E7EQL1 145 aa11.68□□□□□ -0.54
NUDCD3-207ENST00000478769 NGFP01138 241 aa11.68□□□□□ -0.54
NUDCD3-207ENST00000478769 CCDC159P0C7I6 412 aa11.68□□□□□ -0.54
NUDCD3-207ENST00000478769 LIMS3P0CW19 117 aa11.68□□□□□ -0.54
NUDCD3-207ENST00000478769 LIMS4P0CW20 117 aa11.68□□□□□ -0.54
NUDCD3-207ENST00000478769 SLC2A1P11166 492 aa11.68□□□□□ -0.54
NUDCD3-207ENST00000478769 CRHBPP24387 322 aa11.68□□□□□ -0.54
NUDCD3-207ENST00000478769 HSD11B1P28845 292 aa11.68□□□□□ -0.54
NUDCD3-207ENST00000478769 CX3CR1P49238 355 aa11.68□□□□□ -0.54
NUDCD3-207ENST00000478769 ETV1P50549 477 aa11.68□□□□□ -0.54
NUDCD3-207ENST00000478769 TPTEP56180 551 aa11.68□□□□□ -0.54
NUDCD3-207ENST00000478769 PSMA6P60900 246 aaKnown RBP11.68□□□□□ -0.54
NUDCD3-207ENST00000478769 ERVS71-1P61550 626 aa11.68□□□□□ -0.54
NUDCD3-207ENST00000478769 EGR3Q06889 387 aa11.68□□□□□ -0.54
NUDCD3-207ENST00000478769 ST3GAL4Q11206 333 aa11.68□□□□□ -0.54
NUDCD3-207ENST00000478769 MSMPQ1L6U9 139 aa11.68□□□□□ -0.54
NUDCD3-207ENST00000478769 CDONQ4KMG0 1287 aa11.68□□□□□ -0.54
NUDCD3-207ENST00000478769 TP53I3Q53FA7 332 aa11.68□□□□□ -0.54
NUDCD3-207ENST00000478769 PLEKHG7Q6ZR37 379 aa11.68□□□□□ -0.54
NUDCD3-207ENST00000478769 NAA40Q86UY6 237 aa11.68□□□□□ -0.54
NUDCD3-207ENST00000478769 ZNF540Q8NDQ6 660 aa11.68□□□□□ -0.54
NUDCD3-207ENST00000478769 ABHD4Q8TB40 342 aa11.68□□□□□ -0.54
NUDCD3-207ENST00000478769 AKAP1Q92667 903 aaKnown RBP eCLIP11.68□□□□□ -0.54
NUDCD3-207ENST00000478769 C4orf45Q96LM5 186 aa11.68□□□□□ -0.54
NUDCD3-207ENST00000478769 DCLRE1CQ96SD1 692 aaKnown RBP11.68□□□□□ -0.54
NUDCD3-207ENST00000478769 DOK1Q99704 481 aa11.68□□□□□ -0.54
NUDCD3-207ENST00000478769 ALG8Q9BVK2 526 aa11.68□□□□□ -0.54
NUDCD3-207ENST00000478769 POFUT1Q9H488 388 aa11.68□□□□□ -0.54
NUDCD3-207ENST00000478769 INPP5EQ9NRR6 644 aa11.68□□□□□ -0.54
NUDCD3-207ENST00000478769 ACOXLQ9NUZ1 547 aa11.68□□□□□ -0.54
NUDCD3-207ENST00000478769 ERVK13-1Q9NX77 482 aa11.68□□□□□ -0.54
NUDCD3-207ENST00000478769 POU2F3Q9UKI9 436 aa11.68□□□□□ -0.54
NUDCD3-207ENST00000478769 LRRC42Q9Y546 428 aa11.68□□□□□ -0.54
NUDCD3-207ENST00000478769 ATP23Q9Y6H3 246 aa11.68□□□□□ -0.54
NUDCD3-207ENST00000478769 ITPR2Q14571 2701 aa11.68□□□□□ -0.54
NUDCD3-207ENST00000478769 HEATR1Q9H583 2144 aaKnown RBP11.68□□□□□ -0.54
NUDCD3-207ENST00000478769 RAI1Q7Z5J4 1906 aaPredicted RBP11.67□□□□□ -0.54
NUDCD3-207ENST00000478769 DCKP27707 260 aa11.67□□□□□ -0.54
NUDCD3-207ENST00000478769 SSTR2P30874 369 aa11.67□□□□□ -0.54
NUDCD3-207ENST00000478769 THBS4P35443 961 aa11.67□□□□□ -0.54
NUDCD3-207ENST00000478769 SLC6A9P48067 706 aa11.67□□□□□ -0.54
NUDCD3-207ENST00000478769 RIDAP52758 137 aaKnown RBP11.67□□□□□ -0.54
NUDCD3-207ENST00000478769 UCP2P55851 309 aa11.67□□□□□ -0.54
NUDCD3-207ENST00000478769 ZNF121P58317 390 aaPredicted RBP11.67□□□□□ -0.54
NUDCD3-207ENST00000478769 CSNK2BP67870 215 aa11.67□□□□□ -0.54
NUDCD3-207ENST00000478769 SLC35A2P78381 396 aa11.67□□□□□ -0.54
NUDCD3-207ENST00000478769 MFGE8Q08431 387 aaPredicted RBP11.67□□□□□ -0.54
NUDCD3-207ENST00000478769 MED21Q13503 144 aa11.67□□□□□ -0.54
NUDCD3-207ENST00000478769 GALEQ14376 348 aa11.67□□□□□ -0.54
NUDCD3-207ENST00000478769 SNAI3Q3KNW1 292 aa11.67□□□□□ -0.54
NUDCD3-207ENST00000478769 SPATA46Q5T0L3 261 aa11.67□□□□□ -0.54
NUDCD3-207ENST00000478769 DEGS2Q6QHC5 323 aa11.67□□□□□ -0.54
NUDCD3-207ENST00000478769 VHLLQ6RSH7 139 aa11.67□□□□□ -0.54
NUDCD3-207ENST00000478769 DRAM2Q6UX65 266 aa11.67□□□□□ -0.54
NUDCD3-207ENST00000478769 COLCA1Q6ZS62 124 aa11.67□□□□□ -0.54
NUDCD3-207ENST00000478769 PRSS45Q7RTY3 260 aa11.67□□□□□ -0.54
NUDCD3-207ENST00000478769 LHFPL3Q86UP9 236 aa11.67□□□□□ -0.54
NUDCD3-207ENST00000478769 ZNF283Q8N7M2 679 aa11.67□□□□□ -0.54
NUDCD3-207ENST00000478769 SNX33Q8WV41 574 aa11.67□□□□□ -0.54
NUDCD3-207ENST00000478769 TMEM171Q8WVE6 324 aa11.67□□□□□ -0.54
NUDCD3-207ENST00000478769 TMEM80Q96HE8 168 aa11.67□□□□□ -0.54
NUDCD3-207ENST00000478769 C1QTNF5Q9BXJ0 243 aa11.67□□□□□ -0.54
NUDCD3-207ENST00000478769 MROQ9BYG7 248 aa11.67□□□□□ -0.54
NUDCD3-207ENST00000478769 CA10Q9NS85 328 aa11.67□□□□□ -0.54
NUDCD3-207ENST00000478769 FAM206AQ9NX38 181 aa11.67□□□□□ -0.54
NUDCD3-207ENST00000478769 SCN3BQ9NY72 215 aa11.67□□□□□ -0.54
NUDCD3-207ENST00000478769 GNG8Q9UK08 70 aa11.67□□□□□ -0.54
NUDCD3-207ENST00000478769 AKAP6Q13023 2319 aa11.67□□□□□ -0.54
NUDCD3-207ENST00000478769 SPG11Q96JI7 2443 aa11.66□□□□□ -0.54
NUDCD3-207ENST00000478769 METTL15A6NJ78 407 aa11.66□□□□□ -0.54
NUDCD3-207ENST00000478769 PTGES3LE9PB15 166 aa11.66□□□□□ -0.54
NUDCD3-207ENST00000478769 HS3ST1O14792 307 aa11.66□□□□□ -0.54
NUDCD3-207ENST00000478769 ZNF254O75437 659 aa11.66□□□□□ -0.54
NUDCD3-207ENST00000478769 SRSF10O75494 262 aaKnown RBP11.66□□□□□ -0.54
NUDCD3-207ENST00000478769 SULT1C4O75897 302 aa11.66□□□□□ -0.54
NUDCD3-207ENST00000478769 KRT8P05787 483 aa11.66□□□□□ -0.54
NUDCD3-207ENST00000478769 LCKP06239 509 aa11.66□□□□□ -0.54
NUDCD3-207ENST00000478769 CDK1P06493 297 aa11.66□□□□□ -0.54
NUDCD3-207ENST00000478769 C21orf33P30042 268 aaPredicted RBP11.66□□□□□ -0.54
NUDCD3-207ENST00000478769 RGS6P49758 472 aa11.66□□□□□ -0.54
NUDCD3-207ENST00000478769 OR12D2P58182 307 aa11.66□□□□□ -0.54
NUDCD3-207ENST00000478769 KRTAP10-9P60411 292 aa11.66□□□□□ -0.54
NUDCD3-207ENST00000478769 PPP1CBP62140 327 aa11.66□□□□□ -0.54
NUDCD3-207ENST00000478769 ACTA2P62736 377 aa11.66□□□□□ -0.54
NUDCD3-207ENST00000478769 ACTG2P63267 376 aa11.66□□□□□ -0.54
NUDCD3-207ENST00000478769 RBM48Q5RL73 367 aaKnown RBP11.66□□□□□ -0.54
NUDCD3-207ENST00000478769 ARL9Q6T311 187 aa11.66□□□□□ -0.54
NUDCD3-207ENST00000478769 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.66□□□□□ -0.54
NUDCD3-207ENST00000478769 STX19Q8N4C7 294 aa11.66□□□□□ -0.54
NUDCD3-207ENST00000478769 YIPF7Q8N8F6 280 aa11.66□□□□□ -0.54
NUDCD3-207ENST00000478769 IPCEF1Q8WWN9 437 aaPredicted RBP11.66□□□□□ -0.54
NUDCD3-207ENST00000478769 RNF166Q96A37 237 aaPredicted RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms