RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 TOR3AQ9H497 397 aa8.8□□□□□ -1
HDAC6-222ENST00000478095 MARCH7Q9H992 704 aa8.8□□□□□ -1
HDAC6-222ENST00000478095 ELOVL3Q9HB03 270 aa8.8□□□□□ -1
HDAC6-222ENST00000478095 PTTG3PQ9NZH4 202 aa8.8□□□□□ -1
HDAC6-222ENST00000478095 TAAR3PQ9P1P4 343 aa8.8□□□□□ -1
HDAC6-222ENST00000478095 KLHDC2Q9Y2U9 406 aa8.8□□□□□ -1
HDAC6-222ENST00000478095 STARD10Q9Y365 291 aa8.8□□□□□ -1
HDAC6-222ENST00000478095 MYO9AB2RTY4 2548 aa8.8□□□□□ -1
HDAC6-222ENST00000478095 USF3Q68DE3 2245 aa8.8□□□□□ -1
HDAC6-222ENST00000478095 PRRC2AP48634 2157 aaKnown RBP8.79□□□□□ -1
HDAC6-222ENST00000478095 IGLV3-9A0A075B6K5 115 aa8.79□□□□□ -1
HDAC6-222ENST00000478095 ZNF878C9JN71 531 aa8.79□□□□□ -1
HDAC6-222ENST00000478095 M0R135 149 aa8.79□□□□□ -1
HDAC6-222ENST00000478095 SLC2A1P11166 492 aa8.79□□□□□ -1
HDAC6-222ENST00000478095 ZNF250P15622 560 aa8.79□□□□□ -1
HDAC6-222ENST00000478095 PEX2P28328 305 aa8.79□□□□□ -1
HDAC6-222ENST00000478095 SLC6A9P48067 706 aa8.79□□□□□ -1
HDAC6-222ENST00000478095 EVX1P49640 407 aa8.79□□□□□ -1
HDAC6-222ENST00000478095 PRKXP51817 358 aa8.79□□□□□ -1
HDAC6-222ENST00000478095 EFNA4P52798 201 aa8.79□□□□□ -1
HDAC6-222ENST00000478095 HCCSP53701 268 aa8.79□□□□□ -1
HDAC6-222ENST00000478095 SELENOVP59797 346 aa8.79□□□□□ -1
HDAC6-222ENST00000478095 CDC42P60953 191 aa8.79□□□□□ -1
HDAC6-222ENST00000478095 ELF3P78545 371 aaPredicted RBP8.79□□□□□ -1
HDAC6-222ENST00000478095 EFNB1P98172 346 aa8.79□□□□□ -1
HDAC6-222ENST00000478095 ECH1Q13011 328 aa8.79□□□□□ -1
HDAC6-222ENST00000478095 HLXQ14774 488 aaPredicted RBP8.79□□□□□ -1
HDAC6-222ENST00000478095 TAF13Q15543 124 aa8.79□□□□□ -1
HDAC6-222ENST00000478095 CARTPTQ16568 116 aa8.79□□□□□ -1
HDAC6-222ENST00000478095 KRTAP27-1Q3LI81 207 aa8.79□□□□□ -1
HDAC6-222ENST00000478095 ZNF718Q3SXZ3 478 aa8.79□□□□□ -1
HDAC6-222ENST00000478095 LCE2AQ5TA79 106 aaPredicted RBP8.79□□□□□ -1
HDAC6-222ENST00000478095 LCN1P1Q5VSP4 162 aa8.79□□□□□ -1
HDAC6-222ENST00000478095 AADACL4Q5VUY2 407 aa8.79□□□□□ -1
HDAC6-222ENST00000478095 NXNL2Q5VZ03 156 aa8.79□□□□□ -1
HDAC6-222ENST00000478095 GALNT4Q8N4A0 578 aa8.79□□□□□ -1
HDAC6-222ENST00000478095 ZNF525Q8N782 197 aa8.79□□□□□ -1
HDAC6-222ENST00000478095 THEM6Q8WUY1 208 aa8.79□□□□□ -1
HDAC6-222ENST00000478095 UBE2FQ969M7 185 aa8.79□□□□□ -1
HDAC6-222ENST00000478095 SPTSSAQ969W0 71 aa8.79□□□□□ -1
HDAC6-222ENST00000478095 ZNF799Q96GE5 643 aa8.79□□□□□ -1
HDAC6-222ENST00000478095 DCLRE1CQ96SD1 692 aaKnown RBP8.79□□□□□ -1
HDAC6-222ENST00000478095 TEAD3Q99594 435 aa8.79□□□□□ -1
HDAC6-222ENST00000478095 TTTY10Q9BZA0 68 aa8.79□□□□□ -1
HDAC6-222ENST00000478095 BARX1Q9HBU1 254 aaPredicted RBP8.79□□□□□ -1
HDAC6-222ENST00000478095 DDX28Q9NUL7 540 aaKnown RBP8.79□□□□□ -1
HDAC6-222ENST00000478095 TBCCD1Q9NVR7 557 aa8.79□□□□□ -1
HDAC6-222ENST00000478095 DNAJC27Q9NZQ0 273 aa8.79□□□□□ -1
HDAC6-222ENST00000478095 H2AFY2Q9P0M6 372 aaPredicted RBP8.79□□□□□ -1
HDAC6-222ENST00000478095 N6AMT1Q9Y5N5 214 aa8.79□□□□□ -1
HDAC6-222ENST00000478095 C5orf63A6NC05 138 aa8.78□□□□□ -1
HDAC6-222ENST00000478095 TIMM8AO60220 97 aaPredicted RBP8.78□□□□□ -1
HDAC6-222ENST00000478095 APOL3O95236 402 aa8.78□□□□□ -1
HDAC6-222ENST00000478095 LCATP04180 440 aa8.78□□□□□ -1
HDAC6-222ENST00000478095 LYNP07948 512 aa8.78□□□□□ -1
HDAC6-222ENST00000478095 RGS6P49758 472 aa8.78□□□□□ -1
HDAC6-222ENST00000478095 TPTEP56180 551 aa8.78□□□□□ -1
HDAC6-222ENST00000478095 PSG7Q13046 419 aa8.78□□□□□ -1
HDAC6-222ENST00000478095 SNAI3Q3KNW1 292 aa8.78□□□□□ -1
HDAC6-222ENST00000478095 MBNL2Q5VZF2 373 aaKnown RBP8.78□□□□□ -1
HDAC6-222ENST00000478095 PRSS57Q6UWY2 283 aa8.78□□□□□ -1
HDAC6-222ENST00000478095 MEPCEQ7L2J0 689 aaKnown RBP8.78□□□□□ -1
HDAC6-222ENST00000478095 SHFQ7M4L6 423 aa8.78□□□□□ -1
HDAC6-222ENST00000478095 SLC16A9Q7RTY1 509 aa8.78□□□□□ -1
HDAC6-222ENST00000478095 CIARTQ8N365 385 aaPredicted RBP8.78□□□□□ -1
HDAC6-222ENST00000478095 ZNF283Q8N7M2 679 aa8.78□□□□□ -1
HDAC6-222ENST00000478095 OR8J1Q8NGP2 316 aa8.78□□□□□ -1
HDAC6-222ENST00000478095 OTOSQ8NHW6 89 aa8.78□□□□□ -1
HDAC6-222ENST00000478095 SNX33Q8WV41 574 aa8.78□□□□□ -1
HDAC6-222ENST00000478095 APOBEC3DQ96AK3 386 aaPredicted RBP8.78□□□□□ -1
HDAC6-222ENST00000478095 CMBLQ96DG6 245 aa8.78□□□□□ -1
HDAC6-222ENST00000478095 RAB1BQ9H0U4 201 aa8.78□□□□□ -1
HDAC6-222ENST00000478095 IMPAD1Q9NX62 359 aa8.78□□□□□ -1
HDAC6-222ENST00000478095 SLCO1C1Q9NYB5 712 aa8.78□□□□□ -1
HDAC6-222ENST00000478095 AASSQ9UDR5 926 aa8.78□□□□□ -1
HDAC6-222ENST00000478095 GMPPBQ9Y5P6 360 aa8.78□□□□□ -1
HDAC6-222ENST00000478095 PLCE1Q9P212 2302 aa8.77□□□□□ -1
HDAC6-222ENST00000478095 DSCAMO60469 2012 aa8.77□□□□□ -1.01
HDAC6-222ENST00000478095 SLC22A31A6NKX4 558 aa8.77□□□□□ -1.01
HDAC6-222ENST00000478095 H7C1Q1 480 aa8.77□□□□□ -1.01
HDAC6-222ENST00000478095 PSMD9O00233 223 aa8.77□□□□□ -1.01
HDAC6-222ENST00000478095 SMAD7O15105 426 aaKnown RBP8.77□□□□□ -1.01
HDAC6-222ENST00000478095 SPRY3O43610 288 aa8.77□□□□□ -1.01
HDAC6-222ENST00000478095 IGHV3-13P01766 116 aa8.77□□□□□ -1.01
HDAC6-222ENST00000478095 ERCC1P07992 297 aaPredicted RBP8.77□□□□□ -1.01
HDAC6-222ENST00000478095 H2BFMP0C1H6 154 aa8.77□□□□□ -1.01
HDAC6-222ENST00000478095 CD99P14209 185 aa8.77□□□□□ -1.01
HDAC6-222ENST00000478095 HSD11B1P28845 292 aa8.77□□□□□ -1.01
HDAC6-222ENST00000478095 OTX1P32242 354 aaPredicted RBP8.77□□□□□ -1.01
HDAC6-222ENST00000478095 OPRL1P41146 370 aa8.77□□□□□ -1.01
HDAC6-222ENST00000478095 MAGEB1P43366 347 aa8.77□□□□□ -1.01
HDAC6-222ENST00000478095 CX3CR1P49238 355 aa8.77□□□□□ -1.01
HDAC6-222ENST00000478095 MMP15P51511 669 aa8.77□□□□□ -1.01
HDAC6-222ENST00000478095 TNK1Q13470 666 aa8.77□□□□□ -1.01
HDAC6-222ENST00000478095 LRRN1Q6UXK5 716 aa8.77□□□□□ -1.01
HDAC6-222ENST00000478095 COLCA1Q6ZS62 124 aa8.77□□□□□ -1.01
HDAC6-222ENST00000478095 GID4Q8IVV7 300 aa8.77□□□□□ -1.01
HDAC6-222ENST00000478095 OR5AS1Q8N127 324 aa8.77□□□□□ -1.01
HDAC6-222ENST00000478095 RFLNBQ8N5W9 214 aa8.77□□□□□ -1.01
HDAC6-222ENST00000478095 OR51G2Q8NGK0 314 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms