RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 TMEM196Q5HYL7 178 aa11.41□□□□□ -0.58
RTFDC1-207ENST00000477573 DCST1Q5T197 706 aa11.41□□□□□ -0.58
RTFDC1-207ENST00000477573 ZNF468Q5VIY5 522 aaPredicted RBP11.41□□□□□ -0.58
RTFDC1-207ENST00000477573 ESPNLQ6ZVH7 1005 aa11.41□□□□□ -0.58
RTFDC1-207ENST00000477573 MRGPREQ86SM8 312 aa11.41□□□□□ -0.58
RTFDC1-207ENST00000477573 SYT12Q8IV01 421 aa11.41□□□□□ -0.58
RTFDC1-207ENST00000477573 MRPL41Q8IXM3 137 aaKnown RBP11.41□□□□□ -0.58
RTFDC1-207ENST00000477573 GALNT16Q8N428 558 aa11.41□□□□□ -0.58
RTFDC1-207ENST00000477573 RAB42Q8N4Z0 105 aa11.41□□□□□ -0.58
RTFDC1-207ENST00000477573 SLC25A38Q96DW6 304 aa11.41□□□□□ -0.58
RTFDC1-207ENST00000477573 WDR34Q96EX3 536 aa11.41□□□□□ -0.58
RTFDC1-207ENST00000477573 TMEM19Q96HH6 336 aa11.41□□□□□ -0.58
RTFDC1-207ENST00000477573 TSSK3Q96PN8 268 aa11.41□□□□□ -0.58
RTFDC1-207ENST00000477573 LGR4Q9BXB1 951 aa11.41□□□□□ -0.58
RTFDC1-207ENST00000477573 SLC17A9Q9BYT1 436 aa11.41□□□□□ -0.58
RTFDC1-207ENST00000477573 OR2J1Q9GZK6 312 aa11.41□□□□□ -0.58
RTFDC1-207ENST00000477573 RAB33BQ9H082 229 aa11.41□□□□□ -0.58
RTFDC1-207ENST00000477573 ZNF700Q9H0M5 742 aa11.41□□□□□ -0.58
RTFDC1-207ENST00000477573 MBNL1Q9NR56 388 aaKnown RBP11.41□□□□□ -0.58
RTFDC1-207ENST00000477573 ZNF282Q9UDV7 671 aaPredicted RBP11.41□□□□□ -0.58
RTFDC1-207ENST00000477573 A0A1W2PQU0 124 aa11.4□□□□□ -0.58
RTFDC1-207ENST00000477573 KLF8O95600 359 aaPredicted RBP11.4□□□□□ -0.58
RTFDC1-207ENST00000477573 TGFB1P01137 390 aa11.4□□□□□ -0.58
RTFDC1-207ENST00000477573 UMODP07911 640 aa11.4□□□□□ -0.58
RTFDC1-207ENST00000477573 DCTDP32321 178 aa11.4□□□□□ -0.58
RTFDC1-207ENST00000477573 LTBRP36941 435 aa11.4□□□□□ -0.58
RTFDC1-207ENST00000477573 SULT1A2P50226 295 aa11.4□□□□□ -0.58
RTFDC1-207ENST00000477573 MRPS21P82921 87 aaKnown RBP11.4□□□□□ -0.58
RTFDC1-207ENST00000477573 NHLH1Q02575 133 aa11.4□□□□□ -0.58
RTFDC1-207ENST00000477573 ZNF616Q08AN1 781 aa11.4□□□□□ -0.58
RTFDC1-207ENST00000477573 UBE2V1Q13404 147 aa11.4□□□□□ -0.58
RTFDC1-207ENST00000477573 CBFBQ13951 182 aa11.4□□□□□ -0.58
RTFDC1-207ENST00000477573 COA6Q5JTJ3 125 aaKnown RBP11.4□□□□□ -0.58
RTFDC1-207ENST00000477573 TEX38Q6PEX7 206 aa11.4□□□□□ -0.58
RTFDC1-207ENST00000477573 TMPRSS7Q7RTY8 843 aa11.4□□□□□ -0.58
RTFDC1-207ENST00000477573 SLC35E3Q7Z769 313 aa11.4□□□□□ -0.58
RTFDC1-207ENST00000477573 C1orf87Q8N0U7 546 aa11.4□□□□□ -0.58
RTFDC1-207ENST00000477573 OR4D9Q8NGE8 314 aa11.4□□□□□ -0.58
RTFDC1-207ENST00000477573 OR5D18Q8NGL1 313 aa11.4□□□□□ -0.58
RTFDC1-207ENST00000477573 OR14K1Q8NGZ2 314 aa11.4□□□□□ -0.58
RTFDC1-207ENST00000477573 FAM131CQ96AQ9 280 aa11.4□□□□□ -0.58
RTFDC1-207ENST00000477573 TP53RKQ96S44 253 aa11.4□□□□□ -0.58
RTFDC1-207ENST00000477573 C20orf24Q9BUV8 137 aa11.4□□□□□ -0.58
RTFDC1-207ENST00000477573 TRIM36Q9NQ86 728 aa11.4□□□□□ -0.58
RTFDC1-207ENST00000477573 ZNF230Q9UIE0 474 aaPredicted RBP11.4□□□□□ -0.58
RTFDC1-207ENST00000477573 VAX2Q9UIW0 290 aa11.4□□□□□ -0.58
RTFDC1-207ENST00000477573 OR1A2Q9Y585 309 aa11.4□□□□□ -0.58
RTFDC1-207ENST00000477573 CLDN16Q9Y5I7 305 aa11.4□□□□□ -0.58
RTFDC1-207ENST00000477573 ATG2BQ96BY7 2078 aa11.4□□□□□ -0.58
RTFDC1-207ENST00000477573 TRBV4-1A0A0J9YWV2 114 aa11.4□□□□□ -0.59
RTFDC1-207ENST00000477573 PPP5D1E7EU14 171 aa11.4□□□□□ -0.59
RTFDC1-207ENST00000477573 ZNF264O43296 627 aa11.4□□□□□ -0.59
RTFDC1-207ENST00000477573 TRGC2P03986 189 aa11.4□□□□□ -0.59
RTFDC1-207ENST00000477573 TDGF1P13385 188 aa11.4□□□□□ -0.59
RTFDC1-207ENST00000477573 CHRNB4P30926 498 aa11.4□□□□□ -0.59
RTFDC1-207ENST00000477573 TAGLN2P37802 199 aaKnown RBP11.4□□□□□ -0.59
RTFDC1-207ENST00000477573 LPAR6P43657 344 aa11.4□□□□□ -0.59
RTFDC1-207ENST00000477573 P2RX1P51575 399 aa11.4□□□□□ -0.59
RTFDC1-207ENST00000477573 DGKEP52429 567 aa11.4□□□□□ -0.59
RTFDC1-207ENST00000477573 UCP2P55851 309 aa11.4□□□□□ -0.59
RTFDC1-207ENST00000477573 SMIM11AP58511 58 aa11.4□□□□□ -0.59
RTFDC1-207ENST00000477573 MC1RQ01726 317 aa11.4□□□□□ -0.59
RTFDC1-207ENST00000477573 RASGEF1BQ0VAM2 473 aa11.4□□□□□ -0.59
RTFDC1-207ENST00000477573 CEACAM19Q7Z692 300 aa11.4□□□□□ -0.59
RTFDC1-207ENST00000477573 LINC01551Q86U37 167 aa11.4□□□□□ -0.59
RTFDC1-207ENST00000477573 LYG1Q8N1E2 194 aa11.4□□□□□ -0.59
RTFDC1-207ENST00000477573 LINC00471Q8N535 108 aa11.4□□□□□ -0.59
RTFDC1-207ENST00000477573 OR5W2Q8NH69 310 aa11.4□□□□□ -0.59
RTFDC1-207ENST00000477573 OR5K2Q8NHB8 316 aa11.4□□□□□ -0.59
RTFDC1-207ENST00000477573 INSM2Q96T92 566 aaPredicted RBP11.4□□□□□ -0.59
RTFDC1-207ENST00000477573 TIMM29Q9BSF4 260 aa11.4□□□□□ -0.59
RTFDC1-207ENST00000477573 AURKAIP1Q9NWT8 199 aaPredicted RBP11.4□□□□□ -0.59
RTFDC1-207ENST00000477573 SLC23A2Q9UGH3 650 aa11.4□□□□□ -0.59
RTFDC1-207ENST00000477573 KCNG2Q9UJ96 466 aa11.4□□□□□ -0.59
RTFDC1-207ENST00000477573 MMP24Q9Y5R2 645 aa11.4□□□□□ -0.59
RTFDC1-207ENST00000477573 MYO10Q9HD67 2058 aa11.39□□□□□ -0.59
RTFDC1-207ENST00000477573 TVP23AA6NH52 213 aa11.39□□□□□ -0.59
RTFDC1-207ENST00000477573 DHRS7CA6NNS2 312 aa11.39□□□□□ -0.59
RTFDC1-207ENST00000477573 FLRT2O43155 660 aa11.39□□□□□ -0.59
RTFDC1-207ENST00000477573 ZNF208O43345 1280 aa11.39□□□□□ -0.59
RTFDC1-207ENST00000477573 TOMM40O96008 361 aa11.39□□□□□ -0.59
RTFDC1-207ENST00000477573 B3GALT4O96024 378 aa11.39□□□□□ -0.59
RTFDC1-207ENST00000477573 CSF1P09603 554 aa11.39□□□□□ -0.59
RTFDC1-207ENST00000477573 RAB40ALP0C0E4 278 aa11.39□□□□□ -0.59
RTFDC1-207ENST00000477573 ELAVL4P26378 380 aaKnown RBP11.39□□□□□ -0.59
RTFDC1-207ENST00000477573 TAS2R43P59537 309 aa11.39□□□□□ -0.59
RTFDC1-207ENST00000477573 OR7A5Q15622 319 aa11.39□□□□□ -0.59
RTFDC1-207ENST00000477573 ZNF791Q3KP31 576 aaPredicted RBP11.39□□□□□ -0.59
RTFDC1-207ENST00000477573 NXPE4Q6UWF7 544 aa11.39□□□□□ -0.59
RTFDC1-207ENST00000477573 LCTLQ6UWM7 567 aa11.39□□□□□ -0.59
RTFDC1-207ENST00000477573 ZNF705AQ6ZN79 300 aaPredicted RBP11.39□□□□□ -0.59
RTFDC1-207ENST00000477573 FAM129CQ86XR2 697 aa11.39□□□□□ -0.59
RTFDC1-207ENST00000477573 OR5AR1Q8NGP9 310 aa11.39□□□□□ -0.59
RTFDC1-207ENST00000477573 ABHD5Q8WTS1 349 aa11.39□□□□□ -0.59
RTFDC1-207ENST00000477573 WFDC12Q8WWY7 111 aa11.39□□□□□ -0.59
RTFDC1-207ENST00000477573 RAB40AQ8WXH6 277 aa11.39□□□□□ -0.59
RTFDC1-207ENST00000477573 SMDT1Q9H4I9 107 aa11.39□□□□□ -0.59
RTFDC1-207ENST00000477573 USP36Q9P275 1121 aaKnown RBP11.39□□□□□ -0.59
RTFDC1-207ENST00000477573 CD207Q9UJ71 328 aa11.39□□□□□ -0.59
RTFDC1-207ENST00000477573 AMDHD2Q9Y303 409 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms