RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 ELAC2Q9BQ52 826 aaKnown RBP5.88□□□□□ -1.47
HDAC3-207ENST00000475549 SLC30A2Q9BRI3 323 aa5.88□□□□□ -1.47
HDAC3-207ENST00000475549 GORASP2Q9H8Y8 452 aa5.88□□□□□ -1.47
HDAC3-207ENST00000475549 SRA1Q9HD15 236 aaKnown RBP5.88□□□□□ -1.47
HDAC3-207ENST00000475549 MRPL22Q9NWU5 206 aaKnown RBP5.88□□□□□ -1.47
HDAC3-207ENST00000475549 PTTG3PQ9NZH4 202 aa5.88□□□□□ -1.47
HDAC3-207ENST00000475549 CD300AQ9UGN4 299 aa5.88□□□□□ -1.47
HDAC3-207ENST00000475549 TMEM5Q9Y2B1 443 aa5.88□□□□□ -1.47
HDAC3-207ENST00000475549 FAM32AQ9Y421 112 aaKnown RBP5.88□□□□□ -1.47
HDAC3-207ENST00000475549 PPIAL4AQ9Y536 164 aa5.88□□□□□ -1.47
HDAC3-207ENST00000475549 AUP1Q9Y679 476 aa5.88□□□□□ -1.47
HDAC3-207ENST00000475549 V9GYQ6 96 aa5.88□□□□□ -1.47
HDAC3-207ENST00000475549 F5H5K5 113 aa5.87□□□□□ -1.47
HDAC3-207ENST00000475549 TNFRSF13BO14836 293 aaPredicted RBP5.87□□□□□ -1.47
HDAC3-207ENST00000475549 ARPC3O15145 178 aa5.87□□□□□ -1.47
HDAC3-207ENST00000475549 WIPF1O43516 503 aa5.87□□□□□ -1.47
HDAC3-207ENST00000475549 ACSM4P0C7M7 580 aa5.87□□□□□ -1.47
HDAC3-207ENST00000475549 IGHV4-38-2P0DP08 117 aa5.87□□□□□ -1.47
HDAC3-207ENST00000475549 MDH2P40926 338 aaKnown RBP5.87□□□□□ -1.47
HDAC3-207ENST00000475549 GSSP48637 474 aa5.87□□□□□ -1.47
HDAC3-207ENST00000475549 CENPAP49450 140 aa5.87□□□□□ -1.47
HDAC3-207ENST00000475549 RPS6KA3P51812 740 aa5.87□□□□□ -1.47
HDAC3-207ENST00000475549 SCGB2A2Q13296 93 aa5.87□□□□□ -1.47
HDAC3-207ENST00000475549 GK2Q14410 553 aaPredicted RBP5.87□□□□□ -1.47
HDAC3-207ENST00000475549 SLC9A3R2Q15599 337 aa5.87□□□□□ -1.47
HDAC3-207ENST00000475549 LEG1Q6P5S2 330 aa5.87□□□□□ -1.47
HDAC3-207ENST00000475549 LYPD2Q6UXB3 125 aa5.87□□□□□ -1.47
HDAC3-207ENST00000475549 ZNF841Q6ZN19 808 aa5.87□□□□□ -1.47
HDAC3-207ENST00000475549 DOK3Q7L591 496 aa5.87□□□□□ -1.47
HDAC3-207ENST00000475549 MOGAT3Q86VF5 341 aa5.87□□□□□ -1.47
HDAC3-207ENST00000475549 CYP4Z1Q86W10 505 aa5.87□□□□□ -1.47
HDAC3-207ENST00000475549 LINC00346Q8IVM7 164 aa5.87□□□□□ -1.47
HDAC3-207ENST00000475549 BPIFB2Q8N4F0 458 aa5.87□□□□□ -1.47
HDAC3-207ENST00000475549 KLHL36Q8N4N3 616 aa5.87□□□□□ -1.47
HDAC3-207ENST00000475549 SPICQ8N5J4 248 aa5.87□□□□□ -1.47
HDAC3-207ENST00000475549 C3orf56Q8N813 242 aa5.87□□□□□ -1.47
HDAC3-207ENST00000475549 BHLHE23Q8NDY6 225 aa5.87□□□□□ -1.47
HDAC3-207ENST00000475549 GJC3Q8NFK1 279 aa5.87□□□□□ -1.47
HDAC3-207ENST00000475549 OR13G1Q8NGZ3 307 aa5.87□□□□□ -1.47
HDAC3-207ENST00000475549 ST7LQ8TDW4 575 aa5.87□□□□□ -1.47
HDAC3-207ENST00000475549 POP5Q969H6 163 aaKnown RBP5.87□□□□□ -1.47
HDAC3-207ENST00000475549 APOBEC3DQ96AK3 386 aaPredicted RBP5.87□□□□□ -1.47
HDAC3-207ENST00000475549 CMTM5Q96DZ9 223 aa5.87□□□□□ -1.47
HDAC3-207ENST00000475549 PYURFQ96I23 114 aa5.87□□□□□ -1.47
HDAC3-207ENST00000475549 COG8Q96MW5 612 aa5.87□□□□□ -1.47
HDAC3-207ENST00000475549 ZNF582Q96NG8 517 aaPredicted RBP5.87□□□□□ -1.47
HDAC3-207ENST00000475549 COQ7Q99807 217 aa5.87□□□□□ -1.47
HDAC3-207ENST00000475549 TMEM246Q9BRR3 403 aa5.87□□□□□ -1.47
HDAC3-207ENST00000475549 RBM4Q9BWF3 364 aaKnown RBP5.87□□□□□ -1.47
HDAC3-207ENST00000475549 SUCNR1Q9BXA5 334 aa5.87□□□□□ -1.47
HDAC3-207ENST00000475549 OR52D1Q9H346 318 aa5.87□□□□□ -1.47
HDAC3-207ENST00000475549 FN3KQ9H479 309 aa5.87□□□□□ -1.47
HDAC3-207ENST00000475549 NTN4Q9HB63 628 aa5.87□□□□□ -1.47
HDAC3-207ENST00000475549 SPAG4Q9NPE6 437 aa5.87□□□□□ -1.47
HDAC3-207ENST00000475549 RPRD1BQ9NQG5 326 aaKnown RBP5.87□□□□□ -1.47
HDAC3-207ENST00000475549 ADA2Q9NZK5 511 aa5.87□□□□□ -1.47
HDAC3-207ENST00000475549 PLA2G2EQ9NZK7 142 aa5.87□□□□□ -1.47
HDAC3-207ENST00000475549 CYB5R1Q9UHQ9 305 aa5.87□□□□□ -1.47
HDAC3-207ENST00000475549 ATPIF1Q9UII2 106 aa5.87□□□□□ -1.47
HDAC3-207ENST00000475549 RPS6KA6Q9UK32 745 aa5.87□□□□□ -1.47
HDAC3-207ENST00000475549 NUP50Q9UKX7 468 aa5.87□□□□□ -1.47
HDAC3-207ENST00000475549 AURKCQ9UQB9 309 aa5.87□□□□□ -1.47
HDAC3-207ENST00000475549 IGHV3OR16-10A0A075B7F0 116 aa5.86□□□□□ -1.47
HDAC3-207ENST00000475549 KIR2DS1A0A191URI9 304 aa5.86□□□□□ -1.47
HDAC3-207ENST00000475549 DNAJC9-AS1A6NH13 148 aa5.86□□□□□ -1.47
HDAC3-207ENST00000475549 IQCF6A8MYZ5 107 aa5.86□□□□□ -1.47
HDAC3-207ENST00000475549 J3QW42 95 aa5.86□□□□□ -1.47
HDAC3-207ENST00000475549 NDUFAB1O14561 156 aa5.86□□□□□ -1.47
HDAC3-207ENST00000475549 SPRY1O43609 319 aaPredicted RBP5.86□□□□□ -1.47
HDAC3-207ENST00000475549 SNX3O60493 162 aa5.86□□□□□ -1.47
HDAC3-207ENST00000475549 FCN3O75636 299 aa5.86□□□□□ -1.47
HDAC3-207ENST00000475549 FSTL3O95633 263 aa5.86□□□□□ -1.47
HDAC3-207ENST00000475549 HKR1P10072 659 aa5.86□□□□□ -1.47
HDAC3-207ENST00000475549 HSD17B1P14061 328 aa5.86□□□□□ -1.47
HDAC3-207ENST00000475549 TNFSF4P23510 183 aa5.86□□□□□ -1.47
HDAC3-207ENST00000475549 PRTN3P24158 256 aa5.86□□□□□ -1.47
HDAC3-207ENST00000475549 FPR3P25089 353 aa5.86□□□□□ -1.47
HDAC3-207ENST00000475549 FPR2P25090 351 aa5.86□□□□□ -1.47
HDAC3-207ENST00000475549 CRABP1P29762 137 aa5.86□□□□□ -1.47
HDAC3-207ENST00000475549 PRDX6P30041 224 aa5.86□□□□□ -1.47
HDAC3-207ENST00000475549 RPS27P42677 84 aaKnown RBP5.86□□□□□ -1.47
HDAC3-207ENST00000475549 GATA4P43694 442 aa5.86□□□□□ -1.47
HDAC3-207ENST00000475549 RGS6P49758 472 aa5.86□□□□□ -1.47
HDAC3-207ENST00000475549 HMGA2P52926 109 aa5.86□□□□□ -1.47
HDAC3-207ENST00000475549 RAD23AP54725 363 aa5.86□□□□□ -1.47
HDAC3-207ENST00000475549 MPPED2Q15777 294 aa5.86□□□□□ -1.47
HDAC3-207ENST00000475549 ZNF404Q494X3 552 aa5.86□□□□□ -1.47
HDAC3-207ENST00000475549 CLEC12AQ5QGZ9 265 aa5.86□□□□□ -1.47
HDAC3-207ENST00000475549 SLC35F1Q5T1Q4 408 aa5.86□□□□□ -1.47
HDAC3-207ENST00000475549 ZNF770Q6IQ21 691 aaPredicted RBP5.86□□□□□ -1.47
HDAC3-207ENST00000475549 SLC27A4Q6P1M0 643 aa5.86□□□□□ -1.47
HDAC3-207ENST00000475549 PGBD2Q6P3X8 592 aa5.86□□□□□ -1.47
HDAC3-207ENST00000475549 LYPD4Q6UWN0 246 aa5.86□□□□□ -1.47
HDAC3-207ENST00000475549 KLBQ86Z14 1044 aa5.86□□□□□ -1.47
HDAC3-207ENST00000475549 C19orf18Q8NEA5 215 aa5.86□□□□□ -1.47
HDAC3-207ENST00000475549 OR5L1Q8NGL2 311 aa5.86□□□□□ -1.47
HDAC3-207ENST00000475549 FANK1Q8TC84 345 aa5.86□□□□□ -1.47
HDAC3-207ENST00000475549 SLCO4A1Q96BD0 722 aa5.86□□□□□ -1.47
HDAC3-207ENST00000475549 JMJD8Q96S16 334 aa5.86□□□□□ -1.47
HDAC3-207ENST00000475549 CDRT15Q96T59 188 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms