RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 PLPP5Q8NEB5 264 aa4.34□□□□□ -1.71
NPHP3-206ENST00000474871 OR56A1Q8NGH5 318 aa4.34□□□□□ -1.71
NPHP3-206ENST00000474871 OR4A4PQ8NGN8 299 aa4.34□□□□□ -1.71
NPHP3-206ENST00000474871 SPRYD4Q8WW59 207 aaPredicted RBP4.34□□□□□ -1.71
NPHP3-206ENST00000474871 ELMOD3Q96FG2 381 aa4.34□□□□□ -1.71
NPHP3-206ENST00000474871 SCARF2Q96GP6 870 aaPredicted RBP4.34□□□□□ -1.71
NPHP3-206ENST00000474871 COQ10AQ96MF6 247 aa4.34□□□□□ -1.71
NPHP3-206ENST00000474871 P2RX4Q99571 388 aa4.34□□□□□ -1.71
NPHP3-206ENST00000474871 PHB2Q99623 299 aa4.34□□□□□ -1.71
NPHP3-206ENST00000474871 SLC6A7Q99884 636 aa4.34□□□□□ -1.71
NPHP3-206ENST00000474871 TBL1YQ9BQ87 522 aa4.34□□□□□ -1.71
NPHP3-206ENST00000474871 AIF1LQ9BQI0 150 aa4.34□□□□□ -1.71
NPHP3-206ENST00000474871 RIOK2Q9BVS4 552 aaKnown RBP4.34□□□□□ -1.71
NPHP3-206ENST00000474871 QTRT1Q9BXR0 403 aaKnown RBP4.34□□□□□ -1.71
NPHP3-206ENST00000474871 FLVCR1Q9Y5Y0 555 aa4.34□□□□□ -1.71
NPHP3-206ENST00000474871 FAM90A8PA6NJQ4 464 aa4.34□□□□□ -1.72
NPHP3-206ENST00000474871 BHLHE40O14503 412 aa4.34□□□□□ -1.72
NPHP3-206ENST00000474871 NRG2O14511 850 aaPredicted RBP4.34□□□□□ -1.72
NPHP3-206ENST00000474871 CCL16O15467 120 aa4.34□□□□□ -1.72
NPHP3-206ENST00000474871 ATP6AP2O75787 350 aa4.34□□□□□ -1.72
NPHP3-206ENST00000474871 SC5DO75845 299 aa4.34□□□□□ -1.72
NPHP3-206ENST00000474871 VENTXO95231 258 aa4.34□□□□□ -1.72
NPHP3-206ENST00000474871 CNIH1O95406 144 aa4.34□□□□□ -1.72
NPHP3-206ENST00000474871 HPNP05981 417 aa4.34□□□□□ -1.72
NPHP3-206ENST00000474871 FAM90A13PP0C7W8 464 aa4.34□□□□□ -1.72
NPHP3-206ENST00000474871 FAM90A24PP0C7X0 464 aa4.34□□□□□ -1.72
NPHP3-206ENST00000474871 SULT1A3P0DMM9 295 aa4.34□□□□□ -1.72
NPHP3-206ENST00000474871 SULT1A4P0DMN0 295 aa4.34□□□□□ -1.72
NPHP3-206ENST00000474871 FCGR1AP12314 374 aa4.34□□□□□ -1.72
NPHP3-206ENST00000474871 CPN1P15169 458 aa4.34□□□□□ -1.72
NPHP3-206ENST00000474871 FBLP22087 321 aaKnown RBP4.34□□□□□ -1.72
NPHP3-206ENST00000474871 S100GP29377 79 aa4.34□□□□□ -1.72
NPHP3-206ENST00000474871 CMPK1P30085 196 aa4.34□□□□□ -1.72
NPHP3-206ENST00000474871 NTSR1P30989 418 aa4.34□□□□□ -1.72
NPHP3-206ENST00000474871 FOXG1P55316 489 aaPredicted RBP4.34□□□□□ -1.72
NPHP3-206ENST00000474871 TMPRSS3P57727 454 aa4.34□□□□□ -1.72
NPHP3-206ENST00000474871 LILRA4P59901 499 aa4.34□□□□□ -1.72
NPHP3-206ENST00000474871 RPL7AP62424 266 aaKnown RBP4.34□□□□□ -1.72
NPHP3-206ENST00000474871 PIGFQ07326 219 aa4.34□□□□□ -1.72
NPHP3-206ENST00000474871 C1DQ13901 141 aaKnown RBP4.34□□□□□ -1.72
NPHP3-206ENST00000474871 ZNF789Q5FWF6 425 aa4.34□□□□□ -1.72
NPHP3-206ENST00000474871 RAET1LQ5VY80 246 aa4.34□□□□□ -1.72
NPHP3-206ENST00000474871 TRIQKQ629K1 86 aa4.34□□□□□ -1.72
NPHP3-206ENST00000474871 OR2W3Q7Z3T1 314 aa4.34□□□□□ -1.72
NPHP3-206ENST00000474871 CPEB2Q7Z5Q1 589 aaKnown RBP4.34□□□□□ -1.72
NPHP3-206ENST00000474871 SVBPQ8N300 66 aa4.34□□□□□ -1.72
NPHP3-206ENST00000474871 OR13C4Q8NGS5 318 aa4.34□□□□□ -1.72
NPHP3-206ENST00000474871 SLC35B2Q8TB61 432 aa4.34□□□□□ -1.72
NPHP3-206ENST00000474871 STAG3L4Q8TBR4 150 aa4.34□□□□□ -1.72
NPHP3-206ENST00000474871 EMG1Q92979 244 aaKnown RBP4.34□□□□□ -1.72
NPHP3-206ENST00000474871 LMLNQ96KR4 655 aa4.34□□□□□ -1.72
NPHP3-206ENST00000474871 ZIC5Q96T25 663 aa4.34□□□□□ -1.72
NPHP3-206ENST00000474871 DUSP16Q9BY84 665 aa4.34□□□□□ -1.72
NPHP3-206ENST00000474871 SLC25A31Q9H0C2 315 aa4.34□□□□□ -1.72
NPHP3-206ENST00000474871 C19orf25Q9UFG5 118 aaPredicted RBP4.34□□□□□ -1.72
NPHP3-206ENST00000474871 GNG8Q9UK08 70 aa4.34□□□□□ -1.72
NPHP3-206ENST00000474871 SPIN1Q9Y657 262 aaPredicted RBP4.34□□□□□ -1.72
NPHP3-206ENST00000474871 A0A1W2PRU2 124 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 NKX2-6A6NCS4 301 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 M0R082 166 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 PLPP3O14495 311 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 OR8U9P0C7N5 309 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 RAB5AP20339 215 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 CSRP1P21291 193 aaKnown RBP4.33□□□□□ -1.72
NPHP3-206ENST00000474871 PPIBP23284 216 aaKnown RBP4.33□□□□□ -1.72
NPHP3-206ENST00000474871 CERS1P27544 350 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 RBMS1P29558 406 aaKnown RBP4.33□□□□□ -1.72
NPHP3-206ENST00000474871 DVL1P1P54792 670 aaPredicted RBP4.33□□□□□ -1.72
NPHP3-206ENST00000474871 ERVFRD-1P60508 538 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 PAX2Q02962 417 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 BAXQ07812 192 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 TAF10Q12962 218 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 ITPRIPL2Q3MIP1 535 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 C3orf38Q5JPI3 329 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 CTSL3PQ5NE16 218 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 ZNF787Q6DD87 383 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 EPGNQ6UW88 154 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 HEPN1Q6WQI6 88 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 LRRTM1Q86UE6 522 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 SLC16A11Q8NCK7 471 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 SFXN5Q8TD22 340 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 HMGB4Q8WW32 186 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 LGALS12Q96DT0 336 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 IL4I1Q96RQ9 567 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 PKMYT1Q99640 499 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 TIMM29Q9BSF4 260 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 PKIBQ9C010 78 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 DOK5Q9P104 306 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 OSGIN2Q9Y236 505 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 ZNF780BQ9Y6R6 833 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 TSC2P49815 1807 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 CASP8AP2Q9UKL3 1982 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 GLSO94925 669 aaPredicted RBP4.33□□□□□ -1.72
NPHP3-206ENST00000474871 CD14P08571 375 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 FAM87AP0C7U9 286 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 ACP2P11117 423 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 SDC1P18827 310 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 ZBTB25P24278 435 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 F2RL1P55085 397 aa4.33□□□□□ -1.72
NPHP3-206ENST00000474871 KIAA0040Q15053 153 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms