RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 EIF3MQ7L2H7 374 aaKnown RBP1.17□□□□□ -2.22
CCDC39-203ENST00000473854 FCRLAQ7L513 359 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 PIWIL3Q7Z3Z3 882 aaKnown RBP1.17□□□□□ -2.22
CCDC39-203ENST00000473854 ADCK2Q7Z695 626 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 ASPGQ86U10 573 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 PARGQ86W56 976 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 AMIGO1Q86WK6 493 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 VRK2Q86Y07 508 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 ZDHHC21Q8IVQ6 265 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 FAM219AQ8IW50 185 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 ST13P4Q8IZP2 240 aaPredicted RBP1.17□□□□□ -2.22
CCDC39-203ENST00000473854 FAM9CQ8IZT9 166 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 CA13Q8N1Q1 262 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 ZNF786Q8N393 782 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 FAM89BQ8N5H3 189 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 DEFB119Q8N690 84 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 ACOT4Q8N9L9 421 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 MORN4Q8NDC4 146 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 CATSPER1Q8NEC5 780 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 OR2L5Q8NG80 312 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 OR7G2Q8NG99 324 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 OR10G2Q8NGC3 310 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 OR5T3Q8NGG3 340 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 OR4D10Q8NGI6 311 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 OR8D4Q8NGM9 314 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 OR13F1Q8NGS4 319 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 OR2T29Q8NH02 315 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 OR4Q3Q8NH05 313 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 OR10G6Q8NH81 332 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 OR5K1Q8NHB7 308 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 PSMA8Q8TAA3 256 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 CNIH3Q8TBE1 160 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 NT5CQ8TCD5 201 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 SPPL2AQ8TCT8 520 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 SFXN5Q8TD22 340 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 GANCQ8TET4 914 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 SETD7Q8WTS6 366 aaKnown RBP1.17□□□□□ -2.22
CCDC39-203ENST00000473854 ZDHHC19Q8WVZ1 309 aaPredicted RBP1.17□□□□□ -2.22
CCDC39-203ENST00000473854 GEMIN6Q8WXD5 167 aaKnown RBP1.17□□□□□ -2.22
CCDC39-203ENST00000473854 RLN3Q8WXF3 142 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 OR5P2Q8WZ92 322 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 STARD8Q92502 1023 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 FAM3CQ92520 227 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 FGF11Q92914 225 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 RAB8BQ92930 207 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 UBE2E3Q969T4 207 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 SPSB1Q96BD6 273 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 PPWD1Q96BP3 646 aaKnown RBP1.17□□□□□ -2.22
CCDC39-203ENST00000473854 PPCDCQ96CD2 204 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 ISOC1Q96CN7 298 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 CXorf40BQ96DE9 158 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 TM4SF19Q96DZ7 209 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 RMND5BQ96G75 393 aaPredicted RBP1.17□□□□□ -2.22
CCDC39-203ENST00000473854 C16orf58Q96GQ5 468 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 MSANTD3Q96H12 275 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 SMIM10Q96HG1 83 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 ZNF681Q96N22 645 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 RDH12Q96NR8 316 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 AMDHD1Q96NU7 426 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 COL21A1Q96P44 957 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 GBP5Q96PP8 586 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 OR2A5Q96R48 311 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 OR7D2Q96RA2 312 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 MYCBPQ99417 103 aaPredicted RBP1.17□□□□□ -2.22
CCDC39-203ENST00000473854 GPA33Q99795 319 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 ARHGDIGQ99819 225 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 NIPSNAP1Q9BPW8 284 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 MAPKAP1Q9BPZ7 522 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 KLHDC3Q9BQ90 382 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 C9orf16Q9BUW7 83 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 THUMPD3Q9BV44 507 aaKnown RBP1.17□□□□□ -2.22
CCDC39-203ENST00000473854 OSBPL10Q9BXB5 764 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 GPR174Q9BXC1 333 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 GABARAPL3Q9BY60 117 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 PLA2G12AQ9BZM1 189 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 PCBD2Q9H0N5 130 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 OR10A4Q9H209 315 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 SLC38A1Q9H2H9 487 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 VCX3BQ9H321 246 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 OR51I1Q9H343 314 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 DSN1Q9H410 356 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 RIBC2Q9H4K1 309 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 TMEM38AQ9H6F2 299 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 C8orf33Q9H7E9 229 aaPredicted RBP1.17□□□□□ -2.22
CCDC39-203ENST00000473854 NT5DC2Q9H857 520 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 YY1AP1Q9H869 796 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 RMND5AQ9H871 391 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 CDH20Q9HBT6 801 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 TM9SF3Q9HD45 589 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 MRPS30Q9NP92 439 aaKnown RBP1.17□□□□□ -2.22
CCDC39-203ENST00000473854 IL1RAPQ9NPH3 570 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 MIEF1Q9NQG6 463 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 PFDN4Q9NQP4 134 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 BATF3Q9NR55 127 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 CTPS2Q9NRF8 586 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 PNPLA3Q9NST1 481 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 STARD5Q9NSY2 213 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 ACER3Q9NUN7 267 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 FKBP14Q9NWM8 211 aa1.17□□□□□ -2.22
CCDC39-203ENST00000473854 ZNF226Q9NYT6 803 aa1.17□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms