RNA–Protein interactions for RNA: ENST00000473420.5

CTDSP1-207, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-207ENST00000473420 COPS3Q9UNS2 423 aa16.34■□□□□ 0.21
CTDSP1-207ENST00000473420 KLHDC2Q9Y2U9 406 aa16.34■□□□□ 0.21
CTDSP1-207ENST00000473420 B9A039 149 aa16.33■□□□□ 0.2
CTDSP1-207ENST00000473420 ZNF670-ZNF695F2Z2N8 137 aa16.33■□□□□ 0.2
CTDSP1-207ENST00000473420 F5H5K5 113 aa16.33■□□□□ 0.2
CTDSP1-207ENST00000473420 NGFP01138 241 aa16.33■□□□□ 0.2
CTDSP1-207ENST00000473420 CD8AP01732 235 aa16.33■□□□□ 0.2
CTDSP1-207ENST00000473420 GNAO1P09471 354 aa16.33■□□□□ 0.2
CTDSP1-207ENST00000473420 H2BFMP0C1H6 154 aa16.33■□□□□ 0.2
CTDSP1-207ENST00000473420 OR4A8P0C604 315 aa16.33■□□□□ 0.2
CTDSP1-207ENST00000473420 OR2T7P0C7T2 308 aa16.33■□□□□ 0.2
CTDSP1-207ENST00000473420 DBTP11182 482 aaKnown RBP16.33■□□□□ 0.2
CTDSP1-207ENST00000473420 ZNF250P15622 560 aa16.33■□□□□ 0.2
CTDSP1-207ENST00000473420 DNASE1P24855 282 aa16.33■□□□□ 0.2
CTDSP1-207ENST00000473420 HSD11B1P28845 292 aa16.33■□□□□ 0.2
CTDSP1-207ENST00000473420 HCCSP53701 268 aa16.33■□□□□ 0.2
CTDSP1-207ENST00000473420 PPP1CBP62140 327 aa16.33■□□□□ 0.2
CTDSP1-207ENST00000473420 ROM1Q03395 351 aa16.33■□□□□ 0.2
CTDSP1-207ENST00000473420 ZNF91Q05481 1191 aa16.33■□□□□ 0.2
CTDSP1-207ENST00000473420 C11orf71Q6IPW1 123 aa16.33■□□□□ 0.2
CTDSP1-207ENST00000473420 CDH24Q86UP0 819 aa16.33■□□□□ 0.2
CTDSP1-207ENST00000473420 OR2T27Q8NH04 317 aa16.33■□□□□ 0.2
CTDSP1-207ENST00000473420 OR51B6Q9H340 312 aa16.33■□□□□ 0.2
CTDSP1-207ENST00000473420 MRPS18AQ9NVS2 196 aaKnown RBP16.33■□□□□ 0.2
CTDSP1-207ENST00000473420 LAMP3Q9UQV4 416 aa16.33■□□□□ 0.2
CTDSP1-207ENST00000473420 EXOGQ9Y2C4 368 aaKnown RBP16.33■□□□□ 0.2
CTDSP1-207ENST00000473420 RPL36Q9Y3U8 105 aaKnown RBP16.33■□□□□ 0.2
CTDSP1-207ENST00000473420 PCDHGB1Q9Y5G3 927 aa16.33■□□□□ 0.2
CTDSP1-207ENST00000473420 ZNF254O75437 659 aa16.32■□□□□ 0.2
CTDSP1-207ENST00000473420 CXCR4P61073 352 aa16.32■□□□□ 0.2
CTDSP1-207ENST00000473420 ERVS71-1P61550 626 aa16.32■□□□□ 0.2
CTDSP1-207ENST00000473420 ACTC1P68032 377 aa16.32■□□□□ 0.2
CTDSP1-207ENST00000473420 ACTA1P68133 377 aa16.32■□□□□ 0.2
CTDSP1-207ENST00000473420 SWI5Q1ZZU3 235 aa16.32■□□□□ 0.2
CTDSP1-207ENST00000473420 ZNF718Q3SXZ3 478 aa16.32■□□□□ 0.2
CTDSP1-207ENST00000473420 C6orf52Q5T4I8 152 aa16.32■□□□□ 0.2
CTDSP1-207ENST00000473420 SPATC1Q76KD6 591 aa16.32■□□□□ 0.2
CTDSP1-207ENST00000473420 KRT77Q7Z794 578 aa16.32■□□□□ 0.2
CTDSP1-207ENST00000473420 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.32■□□□□ 0.2
CTDSP1-207ENST00000473420 OR5L1Q8NGL2 311 aa16.32■□□□□ 0.2
CTDSP1-207ENST00000473420 CNIH3Q8TBE1 160 aa16.32■□□□□ 0.2
CTDSP1-207ENST00000473420 FBLIM1Q8WUP2 373 aa16.32■□□□□ 0.2
CTDSP1-207ENST00000473420 MBD6Q96DN6 1003 aa16.32■□□□□ 0.2
CTDSP1-207ENST00000473420 MARS2Q96GW9 593 aaKnown RBP16.32■□□□□ 0.2
CTDSP1-207ENST00000473420 OR8B4Q96RC9 309 aa16.32■□□□□ 0.2
CTDSP1-207ENST00000473420 RASSF4Q9H2L5 321 aa16.32■□□□□ 0.2
CTDSP1-207ENST00000473420 PLK3Q9H4B4 646 aa16.32■□□□□ 0.2
CTDSP1-207ENST00000473420 SP140LQ9H930 580 aa16.32■□□□□ 0.2
CTDSP1-207ENST00000473420 PLEKHA6Q9Y2H5 1048 aa16.32■□□□□ 0.2
CTDSP1-207ENST00000473420 PDZD2O15018 2839 aa16.31■□□□□ 0.2
CTDSP1-207ENST00000473420 IGLV3-9A0A075B6K5 115 aa16.31■□□□□ 0.2
CTDSP1-207ENST00000473420 J3QRE1 110 aa16.31■□□□□ 0.2
CTDSP1-207ENST00000473420 BMP4P12644 408 aa16.31■□□□□ 0.2
CTDSP1-207ENST00000473420 DCTDP32321 178 aa16.31■□□□□ 0.2
CTDSP1-207ENST00000473420 SLC6A9P48067 706 aa16.31■□□□□ 0.2
CTDSP1-207ENST00000473420 SELENOVP59797 346 aa16.31■□□□□ 0.2
CTDSP1-207ENST00000473420 EGR3Q06889 387 aa16.31■□□□□ 0.2
CTDSP1-207ENST00000473420 RAB40BQ12829 278 aa16.31■□□□□ 0.2
CTDSP1-207ENST00000473420 MSMPQ1L6U9 139 aa16.31■□□□□ 0.2
CTDSP1-207ENST00000473420 MST1LQ2TV78 715 aa16.31■□□□□ 0.2
CTDSP1-207ENST00000473420 MBNL2Q5VZF2 373 aaKnown RBP16.31■□□□□ 0.2
CTDSP1-207ENST00000473420 ZNF322Q6U7Q0 402 aaPredicted RBP16.31■□□□□ 0.2
CTDSP1-207ENST00000473420 LRRN1Q6UXK5 716 aa16.31■□□□□ 0.2
CTDSP1-207ENST00000473420 THAP5Q7Z6K1 395 aa16.31■□□□□ 0.2
CTDSP1-207ENST00000473420 ZNF679Q8IYX0 411 aa16.31■□□□□ 0.2
CTDSP1-207ENST00000473420 ZNF283Q8N7M2 679 aa16.31■□□□□ 0.2
CTDSP1-207ENST00000473420 SYNPRQ8TBG9 265 aa16.31■□□□□ 0.2
CTDSP1-207ENST00000473420 SLC25A40Q8TBP6 338 aa16.31■□□□□ 0.2
CTDSP1-207ENST00000473420 LGALS12Q96DT0 336 aa16.31■□□□□ 0.2
CTDSP1-207ENST00000473420 DOK1Q99704 481 aa16.31■□□□□ 0.2
CTDSP1-207ENST00000473420 MROQ9BYG7 248 aa16.31■□□□□ 0.2
CTDSP1-207ENST00000473420 ANKRD60Q9BZ19 345 aa16.31■□□□□ 0.2
CTDSP1-207ENST00000473420 MRPL37Q9BZE1 423 aaKnown RBP16.31■□□□□ 0.2
CTDSP1-207ENST00000473420 OR2J1Q9GZK6 312 aa16.31■□□□□ 0.2
CTDSP1-207ENST00000473420 CXorf56Q9H5V9 222 aa16.31■□□□□ 0.2
CTDSP1-207ENST00000473420 BEX4Q9NWD9 120 aaPredicted RBP16.31■□□□□ 0.2
CTDSP1-207ENST00000473420 STARD10Q9Y365 291 aa16.31■□□□□ 0.2
CTDSP1-207ENST00000473420 LRP12Q9Y561 859 aa16.31■□□□□ 0.2
CTDSP1-207ENST00000473420 SPG11Q96JI7 2443 aa16.31■□□□□ 0.2
CTDSP1-207ENST00000473420 AKAP6Q13023 2319 aa16.31■□□□□ 0.2
CTDSP1-207ENST00000473420 TMEM129A0AVI4 362 aa16.3■□□□□ 0.2
CTDSP1-207ENST00000473420 OVOL3O00110 214 aa16.3■□□□□ 0.2
CTDSP1-207ENST00000473420 APOL3O95236 402 aa16.3■□□□□ 0.2
CTDSP1-207ENST00000473420 GCH1P30793 250 aa16.3■□□□□ 0.2
CTDSP1-207ENST00000473420 CX3CR1P49238 355 aa16.3■□□□□ 0.2
CTDSP1-207ENST00000473420 PRKXP51817 358 aa16.3■□□□□ 0.2
CTDSP1-207ENST00000473420 KLF3P57682 345 aaPredicted RBP16.3■□□□□ 0.2
CTDSP1-207ENST00000473420 SNRPD2P62316 118 aaKnown RBP16.3■□□□□ 0.2
CTDSP1-207ENST00000473420 CDK5R2Q13319 367 aa16.3■□□□□ 0.2
CTDSP1-207ENST00000473420 KLHL22Q53GT1 634 aa16.3■□□□□ 0.2
CTDSP1-207ENST00000473420 RFLNBQ8N5W9 214 aa16.3■□□□□ 0.2
CTDSP1-207ENST00000473420 OR10H4Q8NGA5 316 aa16.3■□□□□ 0.2
CTDSP1-207ENST00000473420 KLF14Q8TD94 323 aaPredicted RBP16.3■□□□□ 0.2
CTDSP1-207ENST00000473420 SLCO1C1Q9NYB5 712 aa16.3■□□□□ 0.2
CTDSP1-207ENST00000473420 POLQO75417 2590 aa16.3■□□□□ 0.2
CTDSP1-207ENST00000473420 ARFGEF3Q5TH69 2177 aa16.29■□□□□ 0.2
CTDSP1-207ENST00000473420 A0A1W2PQL4 384 aaPredicted RBP16.29■□□□□ 0.2
CTDSP1-207ENST00000473420 IRGMA1A4Y4 181 aa16.29■□□□□ 0.2
CTDSP1-207ENST00000473420 FADS2O95864 444 aaKnown RBP16.29■□□□□ 0.2
CTDSP1-207ENST00000473420 IGHV3-13P01766 116 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms