RNA–Protein interactions for RNA: ENST00000472807.1

CHEK2-223, Transcript of checkpoint kinase 2, human

TSL 2

Gene CHEK2, Length 514 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHEK2-223	ENST00000472807	HIST2H3PS2	Q5TEC6	136 aa		7.52	□□□□□ -1.21
CHEK2-223	ENST00000472807	OR2T2	Q6IF00	324 aa		7.52	□□□□□ -1.21
CHEK2-223	ENST00000472807	ZNF620	Q6ZNG0	422 aa		7.52	□□□□□ -1.21
CHEK2-223	ENST00000472807	HIST2H3A	Q71DI3	136 aa		7.52	□□□□□ -1.21
CHEK2-223	ENST00000472807	ZDHHC21	Q8IVQ6	265 aa		7.52	□□□□□ -1.21
CHEK2-223	ENST00000472807	DEFB107A	Q8IZN7	70 aa		7.52	□□□□□ -1.21
CHEK2-223	ENST00000472807	OR6V1	Q8N148	313 aa		7.52	□□□□□ -1.21
CHEK2-223	ENST00000472807	BHLHE23	Q8NDY6	225 aa		7.52	□□□□□ -1.21
CHEK2-223	ENST00000472807	SDR9C7	Q8NEX9	313 aa		7.52	□□□□□ -1.21
CHEK2-223	ENST00000472807	SLC26A10	Q8NG04	563 aa		7.52	□□□□□ -1.21
CHEK2-223	ENST00000472807	OR8G5	Q8NG78	346 aa		7.52	□□□□□ -1.21
CHEK2-223	ENST00000472807	OR13G1	Q8NGZ3	307 aa		7.52	□□□□□ -1.21
CHEK2-223	ENST00000472807	OR4K13	Q8NH42	304 aa		7.52	□□□□□ -1.21
CHEK2-223	ENST00000472807	GNPDA2	Q8TDQ7	276 aa		7.52	□□□□□ -1.21
CHEK2-223	ENST00000472807	FAM216A	Q8WUB2	273 aa		7.52	□□□□□ -1.21
CHEK2-223	ENST00000472807	CDRT15	Q96T59	188 aa		7.52	□□□□□ -1.21
CHEK2-223	ENST00000472807	PITX2	Q99697	317 aa		7.52	□□□□□ -1.21
CHEK2-223	ENST00000472807	SLC6A7	Q99884	636 aa		7.52	□□□□□ -1.21
CHEK2-223	ENST00000472807	ATF6B	Q99941	703 aa		7.52	□□□□□ -1.21
CHEK2-223	ENST00000472807	RBM4	Q9BWF3	364 aa	Known RBP	7.52	□□□□□ -1.21
CHEK2-223	ENST00000472807	HCAR1	Q9BXC0	346 aa		7.52	□□□□□ -1.21
CHEK2-223	ENST00000472807	C1QTNF5	Q9BXJ0	243 aa		7.52	□□□□□ -1.21
CHEK2-223	ENST00000472807	SRA1	Q9HD15	236 aa	Known RBP	7.52	□□□□□ -1.21
CHEK2-223	ENST00000472807	GCM1	Q9NP62	436 aa		7.52	□□□□□ -1.21
CHEK2-223	ENST00000472807	IL1RAP	Q9NPH3	570 aa		7.52	□□□□□ -1.21
CHEK2-223	ENST00000472807	OR5V1	Q9UGF6	321 aa		7.52	□□□□□ -1.21
CHEK2-223	ENST00000472807	CD300A	Q9UGN4	299 aa		7.52	□□□□□ -1.21
CHEK2-223	ENST00000472807	ARL2BP	Q9Y2Y0	163 aa		7.52	□□□□□ -1.21
CHEK2-223	ENST00000472807	IQCF6	A8MYZ5	107 aa		7.51	□□□□□ -1.21
CHEK2-223	ENST00000472807		F5H5K5	113 aa		7.51	□□□□□ -1.21
CHEK2-223	ENST00000472807	TMEM178B	H3BS89	294 aa		7.51	□□□□□ -1.21
CHEK2-223	ENST00000472807	KRT36	O76013	467 aa		7.51	□□□□□ -1.21
CHEK2-223	ENST00000472807	FPR2	P25090	351 aa		7.51	□□□□□ -1.21
CHEK2-223	ENST00000472807	ZFP36	P26651	326 aa	Known RBP	7.51	□□□□□ -1.21
CHEK2-223	ENST00000472807	MSX2	P35548	267 aa	Predicted RBP	7.51	□□□□□ -1.21
CHEK2-223	ENST00000472807	GSS	P48637	474 aa		7.51	□□□□□ -1.21
CHEK2-223	ENST00000472807	MNAT1	P51948	309 aa		7.51	□□□□□ -1.21
CHEK2-223	ENST00000472807	GNGT1	P63211	74 aa		7.51	□□□□□ -1.21
CHEK2-223	ENST00000472807	KHDRBS1	Q07666	443 aa	Known RBP eCLIP	7.51	□□□□□ -1.21
CHEK2-223	ENST00000472807	TRAP1	Q12931	704 aa	Known RBP	7.51	□□□□□ -1.21
CHEK2-223	ENST00000472807	TSPAN31	Q12999	210 aa		7.51	□□□□□ -1.21
CHEK2-223	ENST00000472807	HNRNPA0	Q13151	305 aa	Known RBP	7.51	□□□□□ -1.21
CHEK2-223	ENST00000472807	ESCO2	Q56NI9	601 aa		7.51	□□□□□ -1.21
CHEK2-223	ENST00000472807	CLEC12A	Q5QGZ9	265 aa		7.51	□□□□□ -1.21
CHEK2-223	ENST00000472807	SLC18B1	Q6NT16	456 aa		7.51	□□□□□ -1.21
CHEK2-223	ENST00000472807	RPL13AP3	Q6NVV1	102 aa		7.51	□□□□□ -1.21
CHEK2-223	ENST00000472807	PGBD2	Q6P3X8	592 aa		7.51	□□□□□ -1.21
CHEK2-223	ENST00000472807	CFAP77	Q6ZQR2	320 aa		7.51	□□□□□ -1.21
CHEK2-223	ENST00000472807	ZBTB46	Q86UZ6	589 aa		7.51	□□□□□ -1.21
CHEK2-223	ENST00000472807	LRRC28	Q86X40	367 aa	Predicted RBP	7.51	□□□□□ -1.21
CHEK2-223	ENST00000472807	LINC00346	Q8IVM7	164 aa		7.51	□□□□□ -1.21
CHEK2-223	ENST00000472807	LINC00471	Q8N535	108 aa		7.51	□□□□□ -1.21
CHEK2-223	ENST00000472807	PROKR2	Q8NFJ6	384 aa		7.51	□□□□□ -1.21
CHEK2-223	ENST00000472807	POP5	Q969H6	163 aa	Known RBP	7.51	□□□□□ -1.21
CHEK2-223	ENST00000472807	MEGF10	Q96KG7	1140 aa		7.51	□□□□□ -1.21
CHEK2-223	ENST00000472807	SIGLEC11	Q96RL6	698 aa		7.51	□□□□□ -1.21
CHEK2-223	ENST00000472807	SLC30A2	Q9BRI3	323 aa		7.51	□□□□□ -1.21
CHEK2-223	ENST00000472807	MRI1	Q9BV20	369 aa		7.51	□□□□□ -1.21
CHEK2-223	ENST00000472807	FN3K	Q9H479	309 aa		7.51	□□□□□ -1.21
CHEK2-223	ENST00000472807	PATZ1	Q9HBE1	687 aa	Known RBP	7.51	□□□□□ -1.21
CHEK2-223	ENST00000472807	ARL8B	Q9NVJ2	186 aa		7.51	□□□□□ -1.21
CHEK2-223	ENST00000472807	OPN4	Q9UHM6	478 aa		7.51	□□□□□ -1.21
CHEK2-223	ENST00000472807	CYB5R1	Q9UHQ9	305 aa		7.51	□□□□□ -1.21
CHEK2-223	ENST00000472807	KCNG2	Q9UJ96	466 aa		7.51	□□□□□ -1.21
CHEK2-223	ENST00000472807	LRCH1	Q9Y2L9	728 aa		7.51	□□□□□ -1.21
CHEK2-223	ENST00000472807	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	7.51	□□□□□ -1.21
CHEK2-223	ENST00000472807	AUP1	Q9Y679	476 aa		7.51	□□□□□ -1.21
CHEK2-223	ENST00000472807	CDH10	Q9Y6N8	788 aa		7.51	□□□□□ -1.21
CHEK2-223	ENST00000472807	MGAM2	Q2M2H8	2515 aa		7.51	□□□□□ -1.21
CHEK2-223	ENST00000472807	TRRAP	Q9Y4A5	3859 aa		7.51	□□□□□ -1.21
CHEK2-223	ENST00000472807	OR6C68	A6NDL8	312 aa		7.5	□□□□□ -1.21
CHEK2-223	ENST00000472807	CEACAM18	A8MTB9	384 aa		7.5	□□□□□ -1.21
CHEK2-223	ENST00000472807		A8MXK9	166 aa		7.5	□□□□□ -1.21
CHEK2-223	ENST00000472807		F5H0A9	414 aa	Predicted RBP	7.5	□□□□□ -1.21
CHEK2-223	ENST00000472807	C3orf80	F5H4A9	247 aa		7.5	□□□□□ -1.21
CHEK2-223	ENST00000472807		F5H5P2	479 aa		7.5	□□□□□ -1.21
CHEK2-223	ENST00000472807	TNFRSF11B	O00300	401 aa		7.5	□□□□□ -1.21
CHEK2-223	ENST00000472807	FSHB	P01225	129 aa		7.5	□□□□□ -1.21
CHEK2-223	ENST00000472807	LCAT	P04180	440 aa		7.5	□□□□□ -1.21
CHEK2-223	ENST00000472807	ACSM4	P0C7M7	580 aa		7.5	□□□□□ -1.21
CHEK2-223	ENST00000472807	RPS2	P15880	293 aa	Known RBP	7.5	□□□□□ -1.21
CHEK2-223	ENST00000472807	ZNF823	P16415	610 aa		7.5	□□□□□ -1.21
CHEK2-223	ENST00000472807	CPT2	P23786	658 aa		7.5	□□□□□ -1.21
CHEK2-223	ENST00000472807	SLC6A9	P48067	706 aa		7.5	□□□□□ -1.21
CHEK2-223	ENST00000472807	TPTE	P56180	551 aa		7.5	□□□□□ -1.21
CHEK2-223	ENST00000472807	SEC61A1	P61619	476 aa	Known RBP	7.5	□□□□□ -1.21
CHEK2-223	ENST00000472807	ZNF154	Q13106	437 aa		7.5	□□□□□ -1.21
CHEK2-223	ENST00000472807	KRTAP27-1	Q3LI81	207 aa		7.5	□□□□□ -1.21
CHEK2-223	ENST00000472807	SLC35F1	Q5T1Q4	408 aa		7.5	□□□□□ -1.21
CHEK2-223	ENST00000472807	CYP2R1	Q6VVX0	501 aa		7.5	□□□□□ -1.21
CHEK2-223	ENST00000472807	RBMS3	Q6XE24	437 aa	Known RBP	7.5	□□□□□ -1.21
CHEK2-223	ENST00000472807	PGAP1	Q75T13	922 aa		7.5	□□□□□ -1.21
CHEK2-223	ENST00000472807	MOGAT3	Q86VF5	341 aa		7.5	□□□□□ -1.21
CHEK2-223	ENST00000472807	C1orf87	Q8N0U7	546 aa		7.5	□□□□□ -1.21
CHEK2-223	ENST00000472807	DEFB108B	Q8NET1	73 aa		7.5	□□□□□ -1.21
CHEK2-223	ENST00000472807	OR9Q2	Q8NGE9	314 aa		7.5	□□□□□ -1.21
CHEK2-223	ENST00000472807	OR52E2	Q8NGJ4	325 aa		7.5	□□□□□ -1.21
CHEK2-223	ENST00000472807	OR4C15	Q8NGM1	316 aa		7.5	□□□□□ -1.21
CHEK2-223	ENST00000472807	GCDH	Q92947	438 aa	Predicted RBP	7.5	□□□□□ -1.21
CHEK2-223	ENST00000472807	SPTSSA	Q969W0	71 aa		7.5	□□□□□ -1.21

Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms