RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 ASH2LQ9UBL3 628 aa12.1□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 SLIT3O75094 1523 aa12.1□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 CDRT15L2A8MXV6 281 aa12.1□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 EPXP11678 715 aa12.1□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 BCO1Q9HAY6 547 aa12.1□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 LHX3Q9UBR4 397 aa12.1□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 NQO2P16083 231 aa12.1□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 ADIPOQQ15848 244 aa12.1□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 H1FNTQ75WM6 255 aaPredicted RBP12.1□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 LACC1Q8IV20 430 aa12.1□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 SLCO1B1Q9Y6L6 691 aa12.1□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 NME2P1O60361 137 aa12.1□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 SLC25A6P12236 298 aa12.1□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 SRMP19623 302 aa12.1□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 ZNF91Q05481 1191 aa12.1□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 ZNF691Q5VV52 312 aa12.1□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 SIGIRRQ6IA17 410 aa12.1□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 ACOT7LQ6ZUV0 252 aa12.1□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 NPEPL1Q8NDH3 523 aa12.1□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 C7orf43Q8WVR3 580 aa12.1□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 GPR55Q9Y2T6 319 aaPredicted RBP12.1□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 ZNF724A8MTY0 619 aa12.1□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 RPS23P62266 143 aaKnown RBP12.1□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 ZNF816Q0VGE8 651 aaPredicted RBP12.1□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 ALKBH1Q13686 389 aaKnown RBP12.1□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 ZNF266Q14584 549 aa12.1□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 C1orf140Q5VVS0 124 aa12.1□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 CD300LGQ6UXG3 332 aa12.1□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 OR4C5Q8NGB2 326 aa12.1□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 CPPED1Q9BRF8 314 aaPredicted RBP12.1□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 CLMPQ9H6B4 373 aa12.1□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 WSB2Q9NYS7 404 aaPredicted RBP12.1□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 A0A1W2PRD5 423 aa12.09□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 A0A1W2PRF3 423 aa12.09□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 A0A1W2PRM7 423 aa12.09□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 GNG10P50151 68 aa12.09□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 BCL7CQ8WUZ0 217 aaPredicted RBP12.09□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 YKT6O15498 198 aa12.09□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 GLAP06280 429 aa12.09□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 MRPS10P82664 201 aaKnown RBP12.09□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 ZNF252P-AS1Q0IIN9 211 aa12.09□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 TSPAN31Q12999 210 aa12.09□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 RNFT1Q5M7Z0 435 aa12.09□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 ENTHD1Q8IYW4 607 aa12.09□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 IL22RA2Q969J5 263 aa12.09□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 FAM3DQ96BQ1 224 aa12.09□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 AKIRIN1Q9H9L7 192 aaPredicted RBP12.09□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 NRIP3Q9NQ35 241 aa12.09□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 MED17Q9NVC6 651 aa12.09□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 GPR45Q9Y5Y3 372 aa12.09□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 MED13LQ71F56 2210 aa12.09□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 TMEM235A6NFC5 223 aa12.09□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 IDSB3KWA1 339 aa12.09□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 IRS1P35568 1242 aa12.09□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 OR10A3P58181 314 aa12.09□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 OR10K2Q6IF99 312 aa12.09□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 SFXN4Q6P4A7 337 aa12.09□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 SLC16A11Q8NCK7 471 aa12.09□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 VN1R2Q8NFZ6 395 aa12.09□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 RYDENQ9NUL5 291 aaKnown RBP12.09□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 POMT1Q9Y6A1 747 aa12.09□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 ZC3H12DA2A288 527 aaKnown RBP12.09□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 SDCBPO00560 298 aaPredicted RBP12.09□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 ACOT8O14734 319 aa12.09□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 RBP4P02753 201 aa12.09□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 RD3LP0DJH9 198 aa12.09□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 LCN15Q6UWW0 184 aa12.09□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 MBOAT2Q6ZWT7 520 aa12.09□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 GLCCI1Q86VQ1 547 aa12.09□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 SLCO4A1Q96BD0 722 aa12.09□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 LRFN3Q9BTN0 628 aa12.09□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 DHRS4Q9BTZ2 278 aa12.09□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 CDK5Q00535 292 aa12.09□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 MDGA2Q7Z553 956 aa12.09□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 CHCHD4Q8N4Q1 142 aa12.09□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 OR2Z1Q8NG97 314 aa12.09□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 INPP5EQ9NRR6 644 aa12.09□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 UBR2Q8IWV8 1755 aa12.09□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 M0R082 166 aa12.09□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 OR2J2O76002 312 aa12.09□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 LSAMPQ13449 338 aa12.09□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 HENMT1Q5T8I9 393 aaKnown RBP12.09□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 SLC35E4Q6ICL7 350 aa12.09□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 C1orf87Q8N0U7 546 aa12.09□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 TMEM123Q8N131 208 aa12.09□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 OR2G2Q8NGZ5 317 aa12.09□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 RTP4Q96DX8 246 aa12.09□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 TCEAL7Q9BRU2 100 aa12.09□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 NID2Q14112 1375 aa12.09□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 MLLT11Q13015 90 aaPredicted RBP12.08□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 TFAP2EQ6VUC0 442 aa12.08□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 GPR150Q8NGU9 434 aa12.08□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 TBC1D29Q9UFV1 150 aa12.08□□□□□ -0.47
NPHP3-ACAD11-201ENST00000471702 HOXC13P31276 330 aa12.08□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 ZNF133P52736 654 aaPredicted RBP12.08□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 STUMQ69YW2 141 aa12.08□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 ROBO4Q8WZ75 1007 aa12.08□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 UBE2FQ969M7 185 aa12.08□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 UFC1Q9Y3C8 167 aa12.08□□□□□ -0.48
NPHP3-ACAD11-201ENST00000471702 FAM208AQ9UK61 1670 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms