RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 IDNKQ5T6J7 187 aa8.22□□□□□ -1.09
VPS52-216ENST00000471309 FBXW9Q5XUX1 488 aa8.22□□□□□ -1.09
VPS52-216ENST00000471309 NSUN5P2Q63ZY6 315 aa8.22□□□□□ -1.09
VPS52-216ENST00000471309 DRAM2Q6UX65 266 aa8.22□□□□□ -1.09
VPS52-216ENST00000471309 STAC2Q6ZMT1 411 aa8.22□□□□□ -1.09
VPS52-216ENST00000471309 FAM214BQ7L5A3 538 aa8.22□□□□□ -1.09
VPS52-216ENST00000471309 DPPA2Q7Z7J5 298 aa8.22□□□□□ -1.09
VPS52-216ENST00000471309 LRRTM1Q86UE6 522 aa8.22□□□□□ -1.09
VPS52-216ENST00000471309 SKA3Q8IX90 412 aa8.22□□□□□ -1.09
VPS52-216ENST00000471309 ZNF283Q8N7M2 679 aa8.22□□□□□ -1.09
VPS52-216ENST00000471309 OR8B12Q8NGG6 310 aa8.22□□□□□ -1.09
VPS52-216ENST00000471309 OR13C3Q8NGS6 347 aa8.22□□□□□ -1.09
VPS52-216ENST00000471309 OR1F12Q8NHA8 337 aa8.22□□□□□ -1.09
VPS52-216ENST00000471309 SPTSSAQ969W0 71 aa8.22□□□□□ -1.09
VPS52-216ENST00000471309 PPP1R14AQ96A00 147 aa8.22□□□□□ -1.09
VPS52-216ENST00000471309 ORAI1Q96D31 301 aa8.22□□□□□ -1.09
VPS52-216ENST00000471309 GFI1Q99684 422 aa8.22□□□□□ -1.09
VPS52-216ENST00000471309 MRI1Q9BV20 369 aa8.22□□□□□ -1.09
VPS52-216ENST00000471309 OR2H1Q9GZK4 316 aa8.22□□□□□ -1.09
VPS52-216ENST00000471309 C12orf49Q9H741 205 aa8.22□□□□□ -1.09
VPS52-216ENST00000471309 ABCB9Q9NP78 766 aa8.22□□□□□ -1.09
VPS52-216ENST00000471309 SLC17A5Q9NRA2 495 aa8.22□□□□□ -1.09
VPS52-216ENST00000471309 ABRACLQ9P1F3 81 aa8.22□□□□□ -1.09
VPS52-216ENST00000471309 CKLFQ9UBR5 152 aa8.22□□□□□ -1.09
VPS52-216ENST00000471309 PRSS50Q9UI38 385 aa8.22□□□□□ -1.09
VPS52-216ENST00000471309 DAPK2Q9UIK4 370 aa8.22□□□□□ -1.09
VPS52-216ENST00000471309 TUBD1Q9UJT1 453 aa8.22□□□□□ -1.09
VPS52-216ENST00000471309 ADAM30Q9UKF2 790 aa8.22□□□□□ -1.09
VPS52-216ENST00000471309 FOXJ3Q9UPW0 622 aa8.22□□□□□ -1.09
VPS52-216ENST00000471309 V9GYH0 126 aa8.22□□□□□ -1.09
VPS52-216ENST00000471309 PHF3Q92576 2039 aaKnown RBP8.22□□□□□ -1.09
VPS52-216ENST00000471309 TRAV8-7A0A075B6U6 113 aa8.21□□□□□ -1.1
VPS52-216ENST00000471309 A0A0U1RQV5 110 aa8.21□□□□□ -1.1
VPS52-216ENST00000471309 A0A1B0GTI1 187 aa8.21□□□□□ -1.1
VPS52-216ENST00000471309 A0A1B0GVI7 797 aa8.21□□□□□ -1.1
VPS52-216ENST00000471309 MBD3L4A6NDZ8 208 aaPredicted RBP8.21□□□□□ -1.1
VPS52-216ENST00000471309 MBD3L3A6NE82 208 aaPredicted RBP8.21□□□□□ -1.1
VPS52-216ENST00000471309 MBD3L5A6NJ08 208 aaPredicted RBP8.21□□□□□ -1.1
VPS52-216ENST00000471309 IFITM5A6NNB3 132 aa8.21□□□□□ -1.1
VPS52-216ENST00000471309 M0R135 149 aa8.21□□□□□ -1.1
VPS52-216ENST00000471309 AIPO00170 330 aa8.21□□□□□ -1.1
VPS52-216ENST00000471309 SYT7O43581 403 aa8.21□□□□□ -1.1
VPS52-216ENST00000471309 SLC19A2O60779 497 aa8.21□□□□□ -1.1
VPS52-216ENST00000471309 WDR1O75083 606 aa8.21□□□□□ -1.1
VPS52-216ENST00000471309 CNOT4O95628 575 aaKnown RBP8.21□□□□□ -1.1
VPS52-216ENST00000471309 IGLV3-1P01715 115 aa8.21□□□□□ -1.1
VPS52-216ENST00000471309 ANXA2P07355 339 aaKnown RBP8.21□□□□□ -1.1
VPS52-216ENST00000471309 GABRA1P14867 456 aa8.21□□□□□ -1.1
VPS52-216ENST00000471309 ZNF12P17014 697 aa8.21□□□□□ -1.1
VPS52-216ENST00000471309 IGFBP3P17936 291 aaPredicted RBP8.21□□□□□ -1.1
VPS52-216ENST00000471309 ADRA2CP18825 462 aa8.21□□□□□ -1.1
VPS52-216ENST00000471309 ATF1P18846 271 aa8.21□□□□□ -1.1
VPS52-216ENST00000471309 MPGP29372 298 aa8.21□□□□□ -1.1
VPS52-216ENST00000471309 PSMD7P51665 324 aa8.21□□□□□ -1.1
VPS52-216ENST00000471309 PSG4Q00888 419 aa8.21□□□□□ -1.1
VPS52-216ENST00000471309 GALK2Q01415 458 aa8.21□□□□□ -1.1
VPS52-216ENST00000471309 EIF2S3LQ2VIR3 472 aaKnown RBP8.21□□□□□ -1.1
VPS52-216ENST00000471309 ZNF324BQ6AW86 544 aaPredicted RBP8.21□□□□□ -1.1
VPS52-216ENST00000471309 ASPHD2Q6ICH7 369 aa8.21□□□□□ -1.1
VPS52-216ENST00000471309 ZNF774Q6NX45 483 aa8.21□□□□□ -1.1
VPS52-216ENST00000471309 C16orf87Q6PH81 154 aa8.21□□□□□ -1.1
VPS52-216ENST00000471309 TFAP2EQ6VUC0 442 aa8.21□□□□□ -1.1
VPS52-216ENST00000471309 BTLAQ7Z6A9 289 aa8.21□□□□□ -1.1
VPS52-216ENST00000471309 UBE2J2Q8N2K1 259 aa8.21□□□□□ -1.1
VPS52-216ENST00000471309 PARP16Q8N5Y8 322 aa8.21□□□□□ -1.1
VPS52-216ENST00000471309 Q8NA96 180 aa8.21□□□□□ -1.1
VPS52-216ENST00000471309 C9orf106Q8NAJ2 232 aa8.21□□□□□ -1.1
VPS52-216ENST00000471309 CCDC54Q8NEL0 328 aa8.21□□□□□ -1.1
VPS52-216ENST00000471309 OR5M9Q8NGP3 310 aa8.21□□□□□ -1.1
VPS52-216ENST00000471309 OR6K3Q8NGY3 331 aa8.21□□□□□ -1.1
VPS52-216ENST00000471309 MBD3L2Q8NHZ7 208 aaPredicted RBP8.21□□□□□ -1.1
VPS52-216ENST00000471309 ZNF799Q96GE5 643 aa8.21□□□□□ -1.1
VPS52-216ENST00000471309 WNT5BQ9H1J7 359 aa8.21□□□□□ -1.1
VPS52-216ENST00000471309 BRD7Q9NPI1 651 aa8.21□□□□□ -1.1
VPS52-216ENST00000471309 ZNF224Q9NZL3 707 aa8.21□□□□□ -1.1
VPS52-216ENST00000471309 LUZP4Q9P127 313 aa8.21□□□□□ -1.1
VPS52-216ENST00000471309 COMMD3Q9UBI1 195 aa8.21□□□□□ -1.1
VPS52-216ENST00000471309 AK6Q9Y3D8 172 aaKnown RBP8.21□□□□□ -1.1
VPS52-216ENST00000471309 V9GY05 133 aa8.21□□□□□ -1.1
VPS52-216ENST00000471309 AKAP13Q12802 2813 aa8.21□□□□□ -1.1
VPS52-216ENST00000471309 ALPK2Q86TB3 2170 aa8.21□□□□□ -1.1
VPS52-216ENST00000471309 ARHGAP21Q5T5U3 1957 aa8.21□□□□□ -1.1
VPS52-216ENST00000471309 MAP1BP46821 2468 aaKnown RBP8.2□□□□□ -1.1
VPS52-216ENST00000471309 ZNF407Q9C0G0 2248 aa8.2□□□□□ -1.1
VPS52-216ENST00000471309 FIGNL2A6NMB9 653 aa8.2□□□□□ -1.1
VPS52-216ENST00000471309 ANXA2P2A6NMY6 339 aa8.2□□□□□ -1.1
VPS52-216ENST00000471309 F5H5K5 113 aa8.2□□□□□ -1.1
VPS52-216ENST00000471309 HPGDSO60760 199 aa8.2□□□□□ -1.1
VPS52-216ENST00000471309 IL18BPO95998 194 aa8.2□□□□□ -1.1
VPS52-216ENST00000471309 CRHP06850 196 aa8.2□□□□□ -1.1
VPS52-216ENST00000471309 COX5BP10606 129 aa8.2□□□□□ -1.1
VPS52-216ENST00000471309 SLC2A1P11166 492 aa8.2□□□□□ -1.1
VPS52-216ENST00000471309 SLC2A2P11168 524 aaPredicted RBP8.2□□□□□ -1.1
VPS52-216ENST00000471309 PTBP1P26599 531 aaKnown RBP eCLIP8.2□□□□□ -1.1
VPS52-216ENST00000471309 ARR3P36575 388 aa8.2□□□□□ -1.1
VPS52-216ENST00000471309 HTR5AP47898 357 aa8.2□□□□□ -1.1
VPS52-216ENST00000471309 SLC6A9P48067 706 aa8.2□□□□□ -1.1
VPS52-216ENST00000471309 TDGF1P3P51864 188 aa8.2□□□□□ -1.1
VPS52-216ENST00000471309 TPTEP56180 551 aa8.2□□□□□ -1.1
VPS52-216ENST00000471309 SCAND1P57086 179 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms