RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 SDHAF2Q9NX18 166 aa3.68□□□□□ -1.82
PRPF40A-206ENST00000471167 CCDC59Q9P031 241 aaKnown RBP3.68□□□□□ -1.82
PRPF40A-206ENST00000471167 GALPQ9UBC7 116 aa3.68□□□□□ -1.82
PRPF40A-206ENST00000471167 GMPPBQ9Y5P6 360 aa3.68□□□□□ -1.82
PRPF40A-206ENST00000471167 ZFYVE9O95405 1425 aa3.68□□□□□ -1.82
PRPF40A-206ENST00000471167 COL16A1Q07092 1604 aaPredicted RBP3.67□□□□□ -1.82
PRPF40A-206ENST00000471167 TRAV8-7A0A075B6U6 113 aa3.67□□□□□ -1.82
PRPF40A-206ENST00000471167 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.67□□□□□ -1.82
PRPF40A-206ENST00000471167 A0A0A6YYD5 115 aa3.67□□□□□ -1.82
PRPF40A-206ENST00000471167 IGHV2-70DA0A0C4DH43 119 aa3.67□□□□□ -1.82
PRPF40A-206ENST00000471167 TSPAN11A1L157 253 aa3.67□□□□□ -1.82
PRPF40A-206ENST00000471167 RNF212BA8MTL3 300 aa3.67□□□□□ -1.82
PRPF40A-206ENST00000471167 C2orf74A8MZ97 194 aa3.67□□□□□ -1.82
PRPF40A-206ENST00000471167 H3BMQ9 156 aa3.67□□□□□ -1.82
PRPF40A-206ENST00000471167 CCRL2O00421 344 aa3.67□□□□□ -1.82
PRPF40A-206ENST00000471167 TDP2O95551 362 aa3.67□□□□□ -1.82
PRPF40A-206ENST00000471167 ATP6V1G2O95670 118 aa3.67□□□□□ -1.82
PRPF40A-206ENST00000471167 JCHAINP01591 159 aa3.67□□□□□ -1.82
PRPF40A-206ENST00000471167 CDK1P06493 297 aa3.67□□□□□ -1.82
PRPF40A-206ENST00000471167 RNH1P13489 461 aaKnown RBP3.67□□□□□ -1.82
PRPF40A-206ENST00000471167 CRABP2P29373 138 aa3.67□□□□□ -1.82
PRPF40A-206ENST00000471167 SERPINB1P30740 379 aa3.67□□□□□ -1.82
PRPF40A-206ENST00000471167 OMPP47874 163 aa3.67□□□□□ -1.82
PRPF40A-206ENST00000471167 SERPINB8P50452 374 aa3.67□□□□□ -1.82
PRPF40A-206ENST00000471167 CAV2P51636 162 aa3.67□□□□□ -1.82
PRPF40A-206ENST00000471167 PRKCDQ05655 676 aa3.67□□□□□ -1.82
PRPF40A-206ENST00000471167 SRSF6Q13247 344 aaKnown RBP3.67□□□□□ -1.82
PRPF40A-206ENST00000471167 ASAH1Q13510 395 aa3.67□□□□□ -1.82
PRPF40A-206ENST00000471167 RAB31Q13636 194 aa3.67□□□□□ -1.82
PRPF40A-206ENST00000471167 LAGE3Q14657 143 aa3.67□□□□□ -1.82
PRPF40A-206ENST00000471167 RAB35Q15286 201 aa3.67□□□□□ -1.82
PRPF40A-206ENST00000471167 DGUOKQ16854 277 aa3.67□□□□□ -1.82
PRPF40A-206ENST00000471167 TRIM16LQ309B1 348 aa3.67□□□□□ -1.82
PRPF40A-206ENST00000471167 CHRFAM7AQ494W8 412 aa3.67□□□□□ -1.82
PRPF40A-206ENST00000471167 RESP18Q5W5W9 173 aa3.67□□□□□ -1.82
PRPF40A-206ENST00000471167 NIPAL1Q6NVV3 410 aa3.67□□□□□ -1.82
PRPF40A-206ENST00000471167 FAM92BQ6ZTR7 304 aa3.67□□□□□ -1.82
PRPF40A-206ENST00000471167 PLA2G4DQ86XP0 818 aa3.67□□□□□ -1.82
PRPF40A-206ENST00000471167 STPG2Q8N412 459 aa3.67□□□□□ -1.82
PRPF40A-206ENST00000471167 OR2V1Q8NHB1 315 aa3.67□□□□□ -1.82
PRPF40A-206ENST00000471167 SFXN5Q8TD22 340 aa3.67□□□□□ -1.82
PRPF40A-206ENST00000471167 ACTRT1Q8TDG2 376 aa3.67□□□□□ -1.82
PRPF40A-206ENST00000471167 NELFBQ8WX92 580 aa3.67□□□□□ -1.82
PRPF40A-206ENST00000471167 NDRG1Q92597 394 aaKnown RBP3.67□□□□□ -1.82
PRPF40A-206ENST00000471167 UFD1Q92890 307 aa3.67□□□□□ -1.82
PRPF40A-206ENST00000471167 CREB3L1Q96BA8 519 aa3.67□□□□□ -1.82
PRPF40A-206ENST00000471167 RAB3CQ96E17 227 aa3.67□□□□□ -1.82
PRPF40A-206ENST00000471167 CEP170P1Q96L14 293 aa3.67□□□□□ -1.82
PRPF40A-206ENST00000471167 NOL4LQ96MY1 436 aaPredicted RBP3.67□□□□□ -1.82
PRPF40A-206ENST00000471167 TEAD3Q99594 435 aa3.67□□□□□ -1.82
PRPF40A-206ENST00000471167 SLC35A5Q9BS91 424 aa3.67□□□□□ -1.82
PRPF40A-206ENST00000471167 FAIM2Q9BWQ8 316 aa3.67□□□□□ -1.82
PRPF40A-206ENST00000471167 MFSD1Q9H3U5 465 aa3.67□□□□□ -1.82
PRPF40A-206ENST00000471167 DHX35Q9H5Z1 703 aaKnown RBP3.67□□□□□ -1.82
PRPF40A-206ENST00000471167 ASB7Q9H672 318 aa3.67□□□□□ -1.82
PRPF40A-206ENST00000471167 XPNPEP1Q9NQW7 623 aa3.67□□□□□ -1.82
PRPF40A-206ENST00000471167 SLC25A37Q9NYZ2 338 aa3.67□□□□□ -1.82
PRPF40A-206ENST00000471167 TMCO1Q9UM00 188 aa3.67□□□□□ -1.82
PRPF40A-206ENST00000471167 GINS2Q9Y248 185 aa3.67□□□□□ -1.82
PRPF40A-206ENST00000471167 ARL2BPQ9Y2Y0 163 aa3.67□□□□□ -1.82
PRPF40A-206ENST00000471167 PBRM1Q86U86 1689 aa3.67□□□□□ -1.82
PRPF40A-206ENST00000471167 A0A0A6YYD4 124 aa3.66□□□□□ -1.82
PRPF40A-206ENST00000471167 TRBV5-4A0A0C4DH59 114 aa3.66□□□□□ -1.82
PRPF40A-206ENST00000471167 ANKRD20A5PA0PJZ0 165 aa3.66□□□□□ -1.82
PRPF40A-206ENST00000471167 EFCAB7A8K855 629 aa3.66□□□□□ -1.82
PRPF40A-206ENST00000471167 HACD1B0YJ81 288 aa3.66□□□□□ -1.82
PRPF40A-206ENST00000471167 F5H768 121 aa3.66□□□□□ -1.82
PRPF40A-206ENST00000471167 H7C0C1 242 aa3.66□□□□□ -1.82
PRPF40A-206ENST00000471167 J3QLI3 93 aa3.66□□□□□ -1.82
PRPF40A-206ENST00000471167 INPP4BO15327 924 aa3.66□□□□□ -1.82
PRPF40A-206ENST00000471167 CXCL13O43927 109 aa3.66□□□□□ -1.82
PRPF40A-206ENST00000471167 SOX15O60248 233 aa3.66□□□□□ -1.82
PRPF40A-206ENST00000471167 STX10O60499 249 aa3.66□□□□□ -1.82
PRPF40A-206ENST00000471167 SHOX2O60902 331 aaPredicted RBP3.66□□□□□ -1.82
PRPF40A-206ENST00000471167 ALOX12BO75342 701 aa3.66□□□□□ -1.82
PRPF40A-206ENST00000471167 TRAPPC6AO75865 159 aa3.66□□□□□ -1.82
PRPF40A-206ENST00000471167 RAB36O95755 333 aa3.66□□□□□ -1.82
PRPF40A-206ENST00000471167 CLIC3O95833 236 aa3.66□□□□□ -1.82
PRPF40A-206ENST00000471167 ANGPTL1O95841 491 aa3.66□□□□□ -1.82
PRPF40A-206ENST00000471167 OAS1P00973 400 aaKnown RBP3.66□□□□□ -1.82
PRPF40A-206ENST00000471167 HBE1P02100 147 aa3.66□□□□□ -1.82
PRPF40A-206ENST00000471167 ZNF35P13682 527 aa3.66□□□□□ -1.82
PRPF40A-206ENST00000471167 HIST1H1CP16403 213 aaKnown RBP3.66□□□□□ -1.82
PRPF40A-206ENST00000471167 MAGEA12P43365 314 aa3.66□□□□□ -1.82
PRPF40A-206ENST00000471167 CYB561P49447 251 aa3.66□□□□□ -1.82
PRPF40A-206ENST00000471167 IDH3GP51553 393 aaPredicted RBP3.66□□□□□ -1.82
PRPF40A-206ENST00000471167 AP2S1P53680 142 aaPredicted RBP3.66□□□□□ -1.82
PRPF40A-206ENST00000471167 OR4D2P58180 307 aa3.66□□□□□ -1.82
PRPF40A-206ENST00000471167 TAS2R60P59551 318 aa3.66□□□□□ -1.82
PRPF40A-206ENST00000471167 GNMTQ14749 295 aa3.66□□□□□ -1.82
PRPF40A-206ENST00000471167 PON3Q15166 354 aa3.66□□□□□ -1.82
PRPF40A-206ENST00000471167 SPA17Q15506 151 aa3.66□□□□□ -1.82
PRPF40A-206ENST00000471167 PGGHGQ32M88 737 aa3.66□□□□□ -1.82
PRPF40A-206ENST00000471167 TIGITQ495A1 244 aa3.66□□□□□ -1.82
PRPF40A-206ENST00000471167 VWA2Q5GFL6 755 aa3.66□□□□□ -1.82
PRPF40A-206ENST00000471167 OR8G2PQ6IF36 304 aa3.66□□□□□ -1.82
PRPF40A-206ENST00000471167 Q6ZVQ6 151 aa3.66□□□□□ -1.82
PRPF40A-206ENST00000471167 PUSL1Q8N0Z8 303 aaKnown RBP3.66□□□□□ -1.82
PRPF40A-206ENST00000471167 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.66□□□□□ -1.82
PRPF40A-206ENST00000471167 MDS2Q8NDY4 140 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms