RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 CD300AQ9UGN4 299 aa3.25□□□□□ -1.89
COL9A1-206ENST00000470652 SLC7A8Q9UHI5 535 aa3.25□□□□□ -1.89
COL9A1-206ENST00000470652 NXT1Q9UKK6 140 aaKnown RBP3.25□□□□□ -1.89
COL9A1-206ENST00000470652 MRPS33Q9Y291 106 aaKnown RBP3.25□□□□□ -1.89
COL9A1-206ENST00000470652 TP53TG5Q9Y2B4 290 aa3.25□□□□□ -1.89
COL9A1-206ENST00000470652 OR10H1Q9Y4A9 318 aa3.25□□□□□ -1.89
COL9A1-206ENST00000470652 IGSF10Q6WRI0 2623 aa3.25□□□□□ -1.89
COL9A1-206ENST00000470652 TLN1Q9Y490 2541 aaKnown RBP3.24□□□□□ -1.89
COL9A1-206ENST00000470652 A0A087WV48 116 aa3.24□□□□□ -1.89
COL9A1-206ENST00000470652 hCG_38984A0A1B0GV85 526 aa3.24□□□□□ -1.89
COL9A1-206ENST00000470652 A0A1W2PQ72 361 aa3.24□□□□□ -1.89
COL9A1-206ENST00000470652 FRG2CA6NGY1 282 aa3.24□□□□□ -1.89
COL9A1-206ENST00000470652 NKX6-3A6NJ46 265 aa3.24□□□□□ -1.89
COL9A1-206ENST00000470652 FAM166BA8MTA8 275 aa3.24□□□□□ -1.89
COL9A1-206ENST00000470652 BBIP1A8MTZ0 92 aa3.24□□□□□ -1.89
COL9A1-206ENST00000470652 FAM220BPB1ANY3 271 aa3.24□□□□□ -1.89
COL9A1-206ENST00000470652 H0YC42 278 aa3.24□□□□□ -1.89
COL9A1-206ENST00000470652 hCG_2039718K7EN88 272 aa3.24□□□□□ -1.89
COL9A1-206ENST00000470652 K7ENP7 123 aa3.24□□□□□ -1.89
COL9A1-206ENST00000470652 CXCR6O00574 342 aa3.24□□□□□ -1.89
COL9A1-206ENST00000470652 GYG2O15488 501 aa3.24□□□□□ -1.89
COL9A1-206ENST00000470652 CDC40O60508 579 aaKnown RBP eCLIP3.24□□□□□ -1.89
COL9A1-206ENST00000470652 TPST2O60704 377 aa3.24□□□□□ -1.89
COL9A1-206ENST00000470652 ENTPD5O75356 428 aa3.24□□□□□ -1.89
COL9A1-206ENST00000470652 MTRF1O75570 445 aaKnown RBP3.24□□□□□ -1.89
COL9A1-206ENST00000470652 UGT2B17O75795 530 aa3.24□□□□□ -1.89
COL9A1-206ENST00000470652 OXSR1O95747 527 aaPredicted RBP3.24□□□□□ -1.89
COL9A1-206ENST00000470652 ZNF682O95780 498 aa3.24□□□□□ -1.89
COL9A1-206ENST00000470652 SERPINA1P01009 418 aa3.24□□□□□ -1.89
COL9A1-206ENST00000470652 THY1P04216 161 aa3.24□□□□□ -1.89
COL9A1-206ENST00000470652 SERPINA7P05543 415 aa3.24□□□□□ -1.89
COL9A1-206ENST00000470652 ZCCHC18P0CG32 403 aa3.24□□□□□ -1.89
COL9A1-206ENST00000470652 GPX2P18283 190 aa3.24□□□□□ -1.89
COL9A1-206ENST00000470652 CCNA2P20248 432 aa3.24□□□□□ -1.89
COL9A1-206ENST00000470652 IL10P22301 178 aa3.24□□□□□ -1.89
COL9A1-206ENST00000470652 HTR2AP28223 471 aa3.24□□□□□ -1.89
COL9A1-206ENST00000470652 DUTP33316 252 aaKnown RBP3.24□□□□□ -1.89
COL9A1-206ENST00000470652 TRPC1P48995 793 aa3.24□□□□□ -1.89
COL9A1-206ENST00000470652 KHKP50053 298 aa3.24□□□□□ -1.89
COL9A1-206ENST00000470652 IST1P53990 364 aa3.24□□□□□ -1.89
COL9A1-206ENST00000470652 RAD23AP54725 363 aa3.24□□□□□ -1.89
COL9A1-206ENST00000470652 SKP1P63208 163 aa3.24□□□□□ -1.89
COL9A1-206ENST00000470652 CDK6Q00534 326 aa3.24□□□□□ -1.89
COL9A1-206ENST00000470652 OC90Q02509 493 aaPredicted RBP3.24□□□□□ -1.89
COL9A1-206ENST00000470652 GTF3C1Q12789 2109 aa3.24□□□□□ -1.89
COL9A1-206ENST00000470652 ZNF273Q14593 569 aa3.24□□□□□ -1.89
COL9A1-206ENST00000470652 MAPRE2Q15555 327 aa3.24□□□□□ -1.89
COL9A1-206ENST00000470652 DUSP7Q16829 419 aa3.24□□□□□ -1.89
COL9A1-206ENST00000470652 ZNF791Q3KP31 576 aaPredicted RBP3.24□□□□□ -1.89
COL9A1-206ENST00000470652 CYBRD1Q53TN4 286 aa3.24□□□□□ -1.89
COL9A1-206ENST00000470652 ACER2Q5QJU3 275 aa3.24□□□□□ -1.89
COL9A1-206ENST00000470652 SLC25A30Q5SVS4 291 aa3.24□□□□□ -1.89
COL9A1-206ENST00000470652 ARSKQ6UWY0 536 aa3.24□□□□□ -1.89
COL9A1-206ENST00000470652 MSANTD1Q6ZTZ1 278 aa3.24□□□□□ -1.89
COL9A1-206ENST00000470652 CCDC121Q6ZUS5 278 aa3.24□□□□□ -1.89
COL9A1-206ENST00000470652 C16orf62Q7Z3J2 963 aa3.24□□□□□ -1.89
COL9A1-206ENST00000470652 NET1Q7Z628 596 aaPredicted RBP3.24□□□□□ -1.89
COL9A1-206ENST00000470652 RPS19BP1Q86WX3 136 aaKnown RBP3.24□□□□□ -1.89
COL9A1-206ENST00000470652 MICU2Q8IYU8 434 aa3.24□□□□□ -1.89
COL9A1-206ENST00000470652 HS3ST5Q8IZT8 346 aa3.24□□□□□ -1.89
COL9A1-206ENST00000470652 CDRT4Q8N9R6 151 aa3.24□□□□□ -1.89
COL9A1-206ENST00000470652 M1APQ8TC57 530 aa3.24□□□□□ -1.89
COL9A1-206ENST00000470652 TOMM40LQ969M1 308 aa3.24□□□□□ -1.89
COL9A1-206ENST00000470652 CMTM5Q96DZ9 223 aa3.24□□□□□ -1.89
COL9A1-206ENST00000470652 TPD52L3Q96J77 140 aa3.24□□□□□ -1.89
COL9A1-206ENST00000470652 JSRP1Q96MG2 331 aaPredicted RBP3.24□□□□□ -1.89
COL9A1-206ENST00000470652 COL21A1Q96P44 957 aa3.24□□□□□ -1.89
COL9A1-206ENST00000470652 TAAR6Q96RI8 345 aa3.24□□□□□ -1.89
COL9A1-206ENST00000470652 KCTD14Q9BQ13 255 aaPredicted RBP3.24□□□□□ -1.89
COL9A1-206ENST00000470652 CENPOQ9BU64 300 aa3.24□□□□□ -1.89
COL9A1-206ENST00000470652 ZNF350Q9GZX5 532 aa3.24□□□□□ -1.89
COL9A1-206ENST00000470652 PIGUQ9H490 435 aa3.24□□□□□ -1.89
COL9A1-206ENST00000470652 PRORYQ9H606 182 aa3.24□□□□□ -1.89
COL9A1-206ENST00000470652 TMEM185BQ9H7F4 350 aa3.24□□□□□ -1.89
COL9A1-206ENST00000470652 RMND5AQ9H871 391 aa3.24□□□□□ -1.89
COL9A1-206ENST00000470652 HEXA-AS1Q9H8Q6 139 aa3.24□□□□□ -1.89
COL9A1-206ENST00000470652 C3orf14Q9HBI5 128 aa3.24□□□□□ -1.89
COL9A1-206ENST00000470652 STMN3Q9NZ72 180 aa3.24□□□□□ -1.89
COL9A1-206ENST00000470652 MED11Q9P086 117 aa3.24□□□□□ -1.89
COL9A1-206ENST00000470652 COPS7AQ9UBW8 275 aa3.24□□□□□ -1.89
COL9A1-206ENST00000470652 PSME2Q9UL46 239 aa3.24□□□□□ -1.89
COL9A1-206ENST00000470652 ABCG2Q9UNQ0 655 aa3.24□□□□□ -1.89
COL9A1-206ENST00000470652 ZNF443Q9Y2A4 671 aaPredicted RBP3.24□□□□□ -1.89
COL9A1-206ENST00000470652 L3MBTL1Q9Y468 752 aa3.24□□□□□ -1.89
COL9A1-206ENST00000470652 CHCHD2Q9Y6H1 151 aaPredicted RBP3.24□□□□□ -1.89
COL9A1-206ENST00000470652 EPG5Q9HCE0 2579 aa3.24□□□□□ -1.89
COL9A1-206ENST00000470652 KMT2BQ9UMN6 2715 aaPredicted RBP3.24□□□□□ -1.89
COL9A1-206ENST00000470652 COL12A1Q99715 3063 aa3.23□□□□□ -1.89
COL9A1-206ENST00000470652 MED12LQ86YW9 2145 aa3.23□□□□□ -1.89
COL9A1-206ENST00000470652 IGLV4-3A0A075B6K6 122 aa3.23□□□□□ -1.89
COL9A1-206ENST00000470652 ANXA2P2A6NMY6 339 aa3.23□□□□□ -1.89
COL9A1-206ENST00000470652 LRRN3E7EW58 273 aa3.23□□□□□ -1.89
COL9A1-206ENST00000470652 M0QX08 132 aa3.23□□□□□ -1.89
COL9A1-206ENST00000470652 RRP8O43159 456 aaKnown RBP3.23□□□□□ -1.89
COL9A1-206ENST00000470652 KIAA0513O60268 411 aa3.23□□□□□ -1.89
COL9A1-206ENST00000470652 FADS1O60427 444 aa3.23□□□□□ -1.89
COL9A1-206ENST00000470652 MFN2O95140 757 aa3.23□□□□□ -1.89
COL9A1-206ENST00000470652 LYPD3O95274 346 aa3.23□□□□□ -1.89
COL9A1-206ENST00000470652 KRT75O95678 551 aa3.23□□□□□ -1.89
COL9A1-206ENST00000470652 UBTFL6P0CB48 400 aaPredicted RBP3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms