RNA–Protein interactions for RNA: ENST00000470167.1

COL3A1-205, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 628 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-205ENST00000470167 FRMPD1Q5SYB0 1578 aa4.57□□□□□ -1.68
COL3A1-205ENST00000470167 ASXL1Q8IXJ9 1541 aa4.57□□□□□ -1.68
COL3A1-205ENST00000470167 LOC100509620A0A075B734 347 aa4.57□□□□□ -1.68
COL3A1-205ENST00000470167 A0A0J9YY10 115 aa4.57□□□□□ -1.68
COL3A1-205ENST00000470167 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.57□□□□□ -1.68
COL3A1-205ENST00000470167 A0A1B0GX78 115 aa4.57□□□□□ -1.68
COL3A1-205ENST00000470167 TCRBV5S2A0A599 114 aa4.57□□□□□ -1.68
COL3A1-205ENST00000470167 PSMB11A5LHX3 300 aa4.57□□□□□ -1.68
COL3A1-205ENST00000470167 HHLA1C9JL84 531 aa4.57□□□□□ -1.68
COL3A1-205ENST00000470167 G3V3Q6 166 aa4.57□□□□□ -1.68
COL3A1-205ENST00000470167 RNASET2O00584 256 aaKnown RBP4.57□□□□□ -1.68
COL3A1-205ENST00000470167 SOCS2O14508 198 aa4.57□□□□□ -1.68
COL3A1-205ENST00000470167 SLC31A1O15431 190 aa4.57□□□□□ -1.68
COL3A1-205ENST00000470167 PLA2G10O15496 165 aa4.57□□□□□ -1.68
COL3A1-205ENST00000470167 DNPH1O43598 174 aa4.57□□□□□ -1.68
COL3A1-205ENST00000470167 TIMM8AO60220 97 aaPredicted RBP4.57□□□□□ -1.68
COL3A1-205ENST00000470167 FAM20BO75063 409 aa4.57□□□□□ -1.68
COL3A1-205ENST00000470167 VENTXO95231 258 aa4.57□□□□□ -1.68
COL3A1-205ENST00000470167 ORM1P02763 201 aa4.57□□□□□ -1.68
COL3A1-205ENST00000470167 ISG15P05161 165 aa4.57□□□□□ -1.68
COL3A1-205ENST00000470167 WNT2P09544 360 aa4.57□□□□□ -1.68
COL3A1-205ENST00000470167 C8orf88P0DMB2 117 aa4.57□□□□□ -1.68
COL3A1-205ENST00000470167 SULT1A3P0DMM9 295 aa4.57□□□□□ -1.68
COL3A1-205ENST00000470167 SULT1A4P0DMN0 295 aa4.57□□□□□ -1.68
COL3A1-205ENST00000470167 FCER1AP12319 257 aa4.57□□□□□ -1.68
COL3A1-205ENST00000470167 AZU1P20160 251 aa4.57□□□□□ -1.68
COL3A1-205ENST00000470167 MST1P26927 711 aa4.57□□□□□ -1.68
COL3A1-205ENST00000470167 CMPK1P30085 196 aa4.57□□□□□ -1.68
COL3A1-205ENST00000470167 MIPP30301 263 aa4.57□□□□□ -1.68
COL3A1-205ENST00000470167 OR1D2P34982 312 aa4.57□□□□□ -1.68
COL3A1-205ENST00000470167 DUSP3P51452 185 aaPredicted RBP4.57□□□□□ -1.68
COL3A1-205ENST00000470167 CYP2J2P51589 502 aa4.57□□□□□ -1.68
COL3A1-205ENST00000470167 PAX9P55771 341 aa4.57□□□□□ -1.68
COL3A1-205ENST00000470167 CTBP2P56545 445 aa4.57□□□□□ -1.68
COL3A1-205ENST00000470167 NKX6-1P78426 367 aaPredicted RBP4.57□□□□□ -1.68
COL3A1-205ENST00000470167 BTG2P78543 158 aa4.57□□□□□ -1.68
COL3A1-205ENST00000470167 ZXDBP98169 803 aa4.57□□□□□ -1.68
COL3A1-205ENST00000470167 FABP5Q01469 135 aa4.57□□□□□ -1.68
COL3A1-205ENST00000470167 ZNF763Q0D2J5 394 aa4.57□□□□□ -1.68
COL3A1-205ENST00000470167 PNOCQ13519 176 aa4.57□□□□□ -1.68
COL3A1-205ENST00000470167 IL10RAQ13651 578 aa4.57□□□□□ -1.68
COL3A1-205ENST00000470167 NFATC4Q14934 902 aa4.57□□□□□ -1.68
COL3A1-205ENST00000470167 TMEM132DQ14C87 1099 aa4.57□□□□□ -1.68
COL3A1-205ENST00000470167 RHEBQ15382 184 aa4.57□□□□□ -1.68
COL3A1-205ENST00000470167 HMGN3Q15651 99 aa4.57□□□□□ -1.68
COL3A1-205ENST00000470167 SMN1Q16637 294 aaKnown RBP4.57□□□□□ -1.68
COL3A1-205ENST00000470167 LTC4SQ16873 150 aa4.57□□□□□ -1.68
COL3A1-205ENST00000470167 IQCJQ1A5X6 159 aa4.57□□□□□ -1.68
COL3A1-205ENST00000470167 PDZD11Q5EBL8 140 aa4.57□□□□□ -1.68
COL3A1-205ENST00000470167 ZNF766Q5HY98 468 aa4.57□□□□□ -1.68
COL3A1-205ENST00000470167 XP32Q5T750 250 aa4.57□□□□□ -1.68
COL3A1-205ENST00000470167 DNAJC24Q6P3W2 148 aa4.57□□□□□ -1.68
COL3A1-205ENST00000470167 TMEM182Q6ZP80 229 aaPredicted RBP4.57□□□□□ -1.68
COL3A1-205ENST00000470167 ZNF367Q7RTV3 350 aa4.57□□□□□ -1.68
COL3A1-205ENST00000470167 GOLGA7Q7Z5G4 137 aa4.57□□□□□ -1.68
COL3A1-205ENST00000470167 SYT12Q8IV01 421 aa4.57□□□□□ -1.68
COL3A1-205ENST00000470167 ZNF683Q8IZ20 524 aa4.57□□□□□ -1.68
COL3A1-205ENST00000470167 CMTM1Q8IZ96 169 aa4.57□□□□□ -1.68
COL3A1-205ENST00000470167 LGI4Q8N135 537 aa4.57□□□□□ -1.68
COL3A1-205ENST00000470167 SPICQ8N5J4 248 aa4.57□□□□□ -1.68
COL3A1-205ENST00000470167 C8orf31Q8N9H6 132 aa4.57□□□□□ -1.68
COL3A1-205ENST00000470167 ZNF610Q8N9Z0 462 aa4.57□□□□□ -1.68
COL3A1-205ENST00000470167 LRRC75AQ8NAA5 344 aa4.57□□□□□ -1.68
COL3A1-205ENST00000470167 OR4F6Q8NGB9 312 aa4.57□□□□□ -1.68
COL3A1-205ENST00000470167 OR56A4Q8NGH8 313 aa4.57□□□□□ -1.68
COL3A1-205ENST00000470167 OR52E4Q8NGH9 312 aa4.57□□□□□ -1.68
COL3A1-205ENST00000470167 KIR2DL5BQ8NHK3 375 aa4.57□□□□□ -1.68
COL3A1-205ENST00000470167 C16orf52Q8NHV5 167 aa4.57□□□□□ -1.68
COL3A1-205ENST00000470167 MAFAQ8NHW3 353 aaPredicted RBP4.57□□□□□ -1.68
COL3A1-205ENST00000470167 CLEC4DQ8WXI8 215 aa4.57□□□□□ -1.68
COL3A1-205ENST00000470167 PIGCQ92535 297 aa4.57□□□□□ -1.68
COL3A1-205ENST00000470167 RAD54LQ92698 747 aa4.57□□□□□ -1.68
COL3A1-205ENST00000470167 ST6GALNAC6Q969X2 333 aa4.57□□□□□ -1.68
COL3A1-205ENST00000470167 CXorf40BQ96DE9 158 aa4.57□□□□□ -1.68
COL3A1-205ENST00000470167 PHYHIPLQ96FC7 376 aa4.57□□□□□ -1.68
COL3A1-205ENST00000470167 KAZALD1Q96I82 304 aa4.57□□□□□ -1.68
COL3A1-205ENST00000470167 ZNF582Q96NG8 517 aaPredicted RBP4.57□□□□□ -1.68
COL3A1-205ENST00000470167 GPR82Q96P67 336 aa4.57□□□□□ -1.68
COL3A1-205ENST00000470167 COPS8Q99627 209 aa4.57□□□□□ -1.68
COL3A1-205ENST00000470167 PKMYT1Q99640 499 aa4.57□□□□□ -1.68
COL3A1-205ENST00000470167 ZBP1Q9H171 429 aa4.57□□□□□ -1.68
COL3A1-205ENST00000470167 SLC25A51Q9H1U9 297 aa4.57□□□□□ -1.68
COL3A1-205ENST00000470167 MFSD1Q9H3U5 465 aa4.57□□□□□ -1.68
COL3A1-205ENST00000470167 TMEM27Q9HBJ8 222 aa4.57□□□□□ -1.68
COL3A1-205ENST00000470167 ACSS2Q9NR19 701 aa4.57□□□□□ -1.68
COL3A1-205ENST00000470167 DLL4Q9NR61 685 aa4.57□□□□□ -1.68
COL3A1-205ENST00000470167 LANCL2Q9NS86 450 aa4.57□□□□□ -1.68
COL3A1-205ENST00000470167 DMAC2Q9NW81 257 aa4.57□□□□□ -1.68
COL3A1-205ENST00000470167 GPATCH2LQ9NWQ4 482 aa4.57□□□□□ -1.68
COL3A1-205ENST00000470167 TMEM161AQ9NX61 479 aa4.57□□□□□ -1.68
COL3A1-205ENST00000470167 ANKRD10Q9NXR5 420 aa4.57□□□□□ -1.68
COL3A1-205ENST00000470167 PPIAL4AQ9Y536 164 aa4.57□□□□□ -1.68
COL3A1-205ENST00000470167 KNDC1Q76NI1 1749 aa4.57□□□□□ -1.68
COL3A1-205ENST00000470167 ZFYVE16Q7Z3T8 1539 aa4.56□□□□□ -1.68
COL3A1-205ENST00000470167 PRG4Q92954 1404 aaPredicted RBP4.56□□□□□ -1.68
COL3A1-205ENST00000470167 KIAA1210Q9ULL0 1709 aa4.56□□□□□ -1.68
COL3A1-205ENST00000470167 A0A1W2PPV9 198 aa4.56□□□□□ -1.68
COL3A1-205ENST00000470167 ANTXRLA6NF34 631 aa4.56□□□□□ -1.68
COL3A1-205ENST00000470167 FAM90A20PA6NIJ5 464 aa4.56□□□□□ -1.68
COL3A1-205ENST00000470167 HMSDA8MTL9 139 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms