RNA–Protein interactions for RNA: ENST00000469975.5

C4A-250, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 1 (best)

Gene C4A, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-250ENST00000469975 IFT27Q9BW83 186 aa14.12□□□□□ -0.15
C4A-250ENST00000469975 KRCC1Q9NPI7 259 aaPredicted RBP14.12□□□□□ -0.15
C4A-250ENST00000469975 MED4Q9NPJ6 270 aa14.12□□□□□ -0.15
C4A-250ENST00000469975 INSIG2Q9Y5U4 225 aa14.12□□□□□ -0.15
C4A-250ENST00000469975 AUP1Q9Y679 476 aa14.12□□□□□ -0.15
C4A-250ENST00000469975 PPIAL4EA0A075B759 164 aa14.11□□□□□ -0.15
C4A-250ENST00000469975 PPIAL4CA0A0B4J2A2 164 aa14.11□□□□□ -0.15
C4A-250ENST00000469975 OR6C68A6NDL8 312 aa14.11□□□□□ -0.15
C4A-250ENST00000469975 PPIAL4DF5H284 164 aa14.11□□□□□ -0.15
C4A-250ENST00000469975 SURF4O15260 269 aa14.11□□□□□ -0.15
C4A-250ENST00000469975 PPIAL4FP0DN26 164 aa14.11□□□□□ -0.15
C4A-250ENST00000469975 ANOS1P23352 680 aa14.11□□□□□ -0.15
C4A-250ENST00000469975 FPR2P25090 351 aa14.11□□□□□ -0.15
C4A-250ENST00000469975 CRABP1P29762 137 aa14.11□□□□□ -0.15
C4A-250ENST00000469975 PRDX6P30041 224 aa14.11□□□□□ -0.15
C4A-250ENST00000469975 SLC6A6P31641 620 aa14.11□□□□□ -0.15
C4A-250ENST00000469975 MDH2P40926 338 aaKnown RBP14.11□□□□□ -0.15
C4A-250ENST00000469975 PMELP40967 661 aa14.11□□□□□ -0.15
C4A-250ENST00000469975 COX10Q12887 443 aa14.11□□□□□ -0.15
C4A-250ENST00000469975 SLC35F1Q5T1Q4 408 aa14.11□□□□□ -0.15
C4A-250ENST00000469975 SLC18B1Q6NT16 456 aa14.11□□□□□ -0.15
C4A-250ENST00000469975 DNM1P34Q6PK57 102 aa14.11□□□□□ -0.15
C4A-250ENST00000469975 C19orf18Q8NEA5 215 aa14.11□□□□□ -0.15
C4A-250ENST00000469975 OR5L1Q8NGL2 311 aa14.11□□□□□ -0.15
C4A-250ENST00000469975 OR13G1Q8NGZ3 307 aa14.11□□□□□ -0.15
C4A-250ENST00000469975 POP5Q969H6 163 aaKnown RBP14.11□□□□□ -0.15
C4A-250ENST00000469975 ZNF48Q96MX3 618 aaPredicted RBP14.11□□□□□ -0.15
C4A-250ENST00000469975 ZNF582Q96NG8 517 aaPredicted RBP14.11□□□□□ -0.15
C4A-250ENST00000469975 HDHD2Q9H0R4 259 aa14.11□□□□□ -0.15
C4A-250ENST00000469975 GORASP2Q9H8Y8 452 aa14.11□□□□□ -0.15
C4A-250ENST00000469975 TMEM165Q9HC07 324 aa14.11□□□□□ -0.15
C4A-250ENST00000469975 ATPIF1Q9UII2 106 aa14.11□□□□□ -0.15
C4A-250ENST00000469975 POLR3KQ9Y2Y1 108 aaPredicted RBP14.11□□□□□ -0.15
C4A-250ENST00000469975 A8MXK9 166 aa14.1□□□□□ -0.15
C4A-250ENST00000469975 F5H5K5 113 aa14.1□□□□□ -0.15
C4A-250ENST00000469975 OR10H3O60404 316 aa14.1□□□□□ -0.15
C4A-250ENST00000469975 GMNNO75496 209 aa14.1□□□□□ -0.15
C4A-250ENST00000469975 RENP00797 406 aa14.1□□□□□ -0.15
C4A-250ENST00000469975 WNT2P09544 360 aa14.1□□□□□ -0.15
C4A-250ENST00000469975 ACSM4P0C7M7 580 aa14.1□□□□□ -0.15
C4A-250ENST00000469975 RRM2P31350 389 aa14.1□□□□□ -0.15
C4A-250ENST00000469975 CD80P33681 288 aa14.1□□□□□ -0.15
C4A-250ENST00000469975 RPS27P42677 84 aaKnown RBP14.1□□□□□ -0.15
C4A-250ENST00000469975 KRTAP27-1Q3LI81 207 aa14.1□□□□□ -0.15
C4A-250ENST00000469975 ESCO2Q56NI9 601 aa14.1□□□□□ -0.15
C4A-250ENST00000469975 AWAT1Q58HT5 328 aa14.1□□□□□ -0.15
C4A-250ENST00000469975 TAF15Q92804 592 aaKnown RBP eCLIP14.1□□□□□ -0.15
C4A-250ENST00000469975 C1orf147Q96MC9 270 aaPredicted RBP14.1□□□□□ -0.15
C4A-250ENST00000469975 PITX2Q99697 317 aa14.1□□□□□ -0.15
C4A-250ENST00000469975 SLC30A2Q9BRI3 323 aa14.1□□□□□ -0.15
C4A-250ENST00000469975 PNRC2Q9NPJ4 139 aaKnown RBP14.1□□□□□ -0.15
C4A-250ENST00000469975 NUP50Q9UKX7 468 aa14.1□□□□□ -0.15
C4A-250ENST00000469975 DNAJC9-AS1A6NH13 148 aa14.09□□□□□ -0.15
C4A-250ENST00000469975 IQCF6A8MYZ5 107 aa14.09□□□□□ -0.15
C4A-250ENST00000469975 ARPC2O15144 300 aa14.09□□□□□ -0.15
C4A-250ENST00000469975 ARPC3O15145 178 aa14.09□□□□□ -0.15
C4A-250ENST00000469975 HLA-DQA2P01906 255 aa14.09□□□□□ -0.15
C4A-250ENST00000469975 IGHV4-38-2P0DP08 117 aa14.09□□□□□ -0.15
C4A-250ENST00000469975 PSKH1P11801 424 aa14.09□□□□□ -0.15
C4A-250ENST00000469975 RPS2P15880 293 aaKnown RBP14.09□□□□□ -0.15
C4A-250ENST00000469975 EGR1P18146 543 aa14.09□□□□□ -0.15
C4A-250ENST00000469975 FPR3P25089 353 aa14.09□□□□□ -0.15
C4A-250ENST00000469975 PYCR1P32322 319 aa14.09□□□□□ -0.15
C4A-250ENST00000469975 GGT2P36268 569 aa14.09□□□□□ -0.15
C4A-250ENST00000469975 GSSP48637 474 aa14.09□□□□□ -0.15
C4A-250ENST00000469975 GK2Q14410 553 aaPredicted RBP14.09□□□□□ -0.15
C4A-250ENST00000469975 CLEC12AQ5QGZ9 265 aa14.09□□□□□ -0.15
C4A-250ENST00000469975 LYPD4Q6UWN0 246 aa14.09□□□□□ -0.15
C4A-250ENST00000469975 COLCA1Q6ZS62 124 aa14.09□□□□□ -0.15
C4A-250ENST00000469975 KLBQ86Z14 1044 aa14.09□□□□□ -0.15
C4A-250ENST00000469975 MUC20Q8N307 709 aaPredicted RBP14.09□□□□□ -0.15
C4A-250ENST00000469975 OR52E2Q8NGJ4 325 aa14.09□□□□□ -0.15
C4A-250ENST00000469975 ZNRF4Q8WWF5 429 aa14.09□□□□□ -0.15
C4A-250ENST00000469975 CDRT15Q96T59 188 aa14.09□□□□□ -0.15
C4A-250ENST00000469975 TMEM246Q9BRR3 403 aa14.09□□□□□ -0.15
C4A-250ENST00000469975 MRI1Q9BV20 369 aa14.09□□□□□ -0.15
C4A-250ENST00000469975 EGLN3Q9H6Z9 239 aa14.09□□□□□ -0.15
C4A-250ENST00000469975 DDX28Q9NUL7 540 aaKnown RBP14.09□□□□□ -0.15
C4A-250ENST00000469975 ARL8BQ9NVJ2 186 aa14.09□□□□□ -0.15
C4A-250ENST00000469975 MRPL22Q9NWU5 206 aaKnown RBP14.09□□□□□ -0.15
C4A-250ENST00000469975 OR5V1Q9UGF6 321 aa14.09□□□□□ -0.15
C4A-250ENST00000469975 CD300AQ9UGN4 299 aa14.09□□□□□ -0.15
C4A-250ENST00000469975 MAGEL2Q9UJ55 1249 aa14.09□□□□□ -0.15
C4A-250ENST00000469975 C5orf63A6NC05 138 aa14.08□□□□□ -0.16
C4A-250ENST00000469975 TVP23AA6NH52 213 aa14.08□□□□□ -0.16
C4A-250ENST00000469975 J3QW42 95 aa14.08□□□□□ -0.16
C4A-250ENST00000469975 SNX3O60493 162 aa14.08□□□□□ -0.16
C4A-250ENST00000469975 LCATP04180 440 aa14.08□□□□□ -0.16
C4A-250ENST00000469975 FABP3P05413 133 aa14.08□□□□□ -0.16
C4A-250ENST00000469975 HSD17B1P14061 328 aa14.08□□□□□ -0.16
C4A-250ENST00000469975 NOS3P29474 1203 aa14.08□□□□□ -0.16
C4A-250ENST00000469975 SRP9P49458 86 aaKnown RBP14.08□□□□□ -0.16
C4A-250ENST00000469975 SMIM11AP58511 58 aa14.08□□□□□ -0.16
C4A-250ENST00000469975 PAX2Q02962 417 aa14.08□□□□□ -0.16
C4A-250ENST00000469975 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.08□□□□□ -0.16
C4A-250ENST00000469975 TRAP1Q12931 704 aaKnown RBP14.08□□□□□ -0.16
C4A-250ENST00000469975 TUSC1Q2TAM9 212 aa14.08□□□□□ -0.16
C4A-250ENST00000469975 PRAMEF6Q5VXH4 476 aa14.08□□□□□ -0.16
C4A-250ENST00000469975 SLC27A4Q6P1M0 643 aa14.08□□□□□ -0.16
C4A-250ENST00000469975 PGBD2Q6P3X8 592 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms