RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 FITM2Q8N6M3 262 aa10.22□□□□□ -0.77
HDAC3-204ENST00000469207 PCYOX1LQ8NBM8 494 aa10.22□□□□□ -0.77
HDAC3-204ENST00000469207 ZDHHC16Q969W1 377 aa10.22□□□□□ -0.77
HDAC3-204ENST00000469207 NEIL1Q96FI4 390 aaPredicted RBP10.22□□□□□ -0.77
HDAC3-204ENST00000469207 HSH2DQ96JZ2 352 aa10.22□□□□□ -0.77
HDAC3-204ENST00000469207 SIKE1Q9BRV8 207 aa10.22□□□□□ -0.77
HDAC3-204ENST00000469207 WACQ9BTA9 647 aa10.22□□□□□ -0.77
HDAC3-204ENST00000469207 RASSF4Q9H2L5 321 aa10.22□□□□□ -0.77
HDAC3-204ENST00000469207 ZMAT3Q9HA38 289 aaKnown RBP10.22□□□□□ -0.77
HDAC3-204ENST00000469207 SRA1Q9HD15 236 aaKnown RBP10.22□□□□□ -0.77
HDAC3-204ENST00000469207 NRIP3Q9NQ35 241 aa10.22□□□□□ -0.77
HDAC3-204ENST00000469207 UFSP2Q9NUQ7 469 aa10.22□□□□□ -0.77
HDAC3-204ENST00000469207 FGFR1OP2Q9NVK5 253 aa10.22□□□□□ -0.77
HDAC3-204ENST00000469207 VSX1Q9NZR4 365 aaPredicted RBP10.22□□□□□ -0.77
HDAC3-204ENST00000469207 LHFPL6Q9Y693 200 aa10.22□□□□□ -0.77
HDAC3-204ENST00000469207 PRKDCP78527 4128 aaKnown RBP10.21□□□□□ -0.77
HDAC3-204ENST00000469207 BBIP1A8MTZ0 92 aa10.21□□□□□ -0.77
HDAC3-204ENST00000469207 C22orf46C9J442 243 aa10.21□□□□□ -0.77
HDAC3-204ENST00000469207 F5H5K5 113 aa10.21□□□□□ -0.77
HDAC3-204ENST00000469207 NME4O00746 187 aa10.21□□□□□ -0.77
HDAC3-204ENST00000469207 AHCYL1O43865 530 aa10.21□□□□□ -0.77
HDAC3-204ENST00000469207 NDUFB2O95178 105 aa10.21□□□□□ -0.77
HDAC3-204ENST00000469207 SFTPBP07988 381 aa10.21□□□□□ -0.77
HDAC3-204ENST00000469207 ANOS1P23352 680 aa10.21□□□□□ -0.77
HDAC3-204ENST00000469207 FPR3P25089 353 aa10.21□□□□□ -0.77
HDAC3-204ENST00000469207 SDHAP31040 664 aa10.21□□□□□ -0.77
HDAC3-204ENST00000469207 PITPNBP48739 271 aa10.21□□□□□ -0.77
HDAC3-204ENST00000469207 SRP9P49458 86 aaKnown RBP10.21□□□□□ -0.77
HDAC3-204ENST00000469207 HIST1H3AP68431 136 aa10.21□□□□□ -0.77
HDAC3-204ENST00000469207 SEC23BQ15437 767 aa10.21□□□□□ -0.77
HDAC3-204ENST00000469207 HIST2H3PS2Q5TEC6 136 aa10.21□□□□□ -0.77
HDAC3-204ENST00000469207 WDR25Q64LD2 544 aaPredicted RBP10.21□□□□□ -0.77
HDAC3-204ENST00000469207 SFRP4Q6FHJ7 346 aaPredicted RBP10.21□□□□□ -0.77
HDAC3-204ENST00000469207 FIP1L1Q6UN15 594 aaKnown RBP10.21□□□□□ -0.77
HDAC3-204ENST00000469207 HIST2H3AQ71DI3 136 aa10.21□□□□□ -0.77
HDAC3-204ENST00000469207 LINC00346Q8IVM7 164 aa10.21□□□□□ -0.77
HDAC3-204ENST00000469207 OR8B3Q8NGG8 313 aa10.21□□□□□ -0.77
HDAC3-204ENST00000469207 OR5L1Q8NGL2 311 aa10.21□□□□□ -0.77
HDAC3-204ENST00000469207 APOBEC3DQ96AK3 386 aaPredicted RBP10.21□□□□□ -0.77
HDAC3-204ENST00000469207 OR8B2Q96RD0 313 aa10.21□□□□□ -0.77
HDAC3-204ENST00000469207 PCGF1Q9BSM1 259 aa10.21□□□□□ -0.77
HDAC3-204ENST00000469207 SLITRK2Q9H156 845 aa10.21□□□□□ -0.77
HDAC3-204ENST00000469207 TMEM100Q9NV29 134 aa10.21□□□□□ -0.77
HDAC3-204ENST00000469207 TMCC3Q9ULS5 477 aa10.21□□□□□ -0.77
HDAC3-204ENST00000469207 TRBV4-1A0A0J9YWV2 114 aa10.2□□□□□ -0.78
HDAC3-204ENST00000469207 C5orf63A6NC05 138 aa10.2□□□□□ -0.78
HDAC3-204ENST00000469207 IQCF6A8MYZ5 107 aa10.2□□□□□ -0.78
HDAC3-204ENST00000469207 GSTA4O15217 222 aa10.2□□□□□ -0.78
HDAC3-204ENST00000469207 FAM20BO75063 409 aa10.2□□□□□ -0.78
HDAC3-204ENST00000469207 SASH3O75995 380 aa10.2□□□□□ -0.78
HDAC3-204ENST00000469207 PPP1R3DO95685 299 aa10.2□□□□□ -0.78
HDAC3-204ENST00000469207 PPIAL4GP0DN37 164 aa10.2□□□□□ -0.78
HDAC3-204ENST00000469207 OMPP47874 163 aa10.2□□□□□ -0.78
HDAC3-204ENST00000469207 POU4F2Q12837 409 aa10.2□□□□□ -0.78
HDAC3-204ENST00000469207 GK2Q14410 553 aaPredicted RBP10.2□□□□□ -0.78
HDAC3-204ENST00000469207 MAPRE2Q15555 327 aa10.2□□□□□ -0.78
HDAC3-204ENST00000469207 KCNMB1Q16558 191 aa10.2□□□□□ -0.78
HDAC3-204ENST00000469207 CFAP77Q6ZQR2 320 aa10.2□□□□□ -0.78
HDAC3-204ENST00000469207 OR6V1Q8N148 313 aa10.2□□□□□ -0.78
HDAC3-204ENST00000469207 BOLLQ8N9W6 283 aaKnown RBP10.2□□□□□ -0.78
HDAC3-204ENST00000469207 FAM156AQ8NDB6 213 aa10.2□□□□□ -0.78
HDAC3-204ENST00000469207 GJC3Q8NFK1 279 aa10.2□□□□□ -0.78
HDAC3-204ENST00000469207 OR52J3Q8NH60 311 aa10.2□□□□□ -0.78
HDAC3-204ENST00000469207 SLCO4A1Q96BD0 722 aa10.2□□□□□ -0.78
HDAC3-204ENST00000469207 PLEKHA8Q96JA3 519 aa10.2□□□□□ -0.78
HDAC3-204ENST00000469207 COG8Q96MW5 612 aa10.2□□□□□ -0.78
HDAC3-204ENST00000469207 CHIAQ9BZP6 476 aa10.2□□□□□ -0.78
HDAC3-204ENST00000469207 C1RLQ9NZP8 487 aa10.2□□□□□ -0.78
HDAC3-204ENST00000469207 CTSZQ9UBR2 303 aa10.2□□□□□ -0.78
HDAC3-204ENST00000469207 CLN8Q9UBY8 286 aa10.2□□□□□ -0.78
HDAC3-204ENST00000469207 B9D1Q9UPM9 204 aa10.2□□□□□ -0.78
HDAC3-204ENST00000469207 POLR1DQ9Y2S0 133 aa10.2□□□□□ -0.78
HDAC3-204ENST00000469207 ENPP4Q9Y6X5 453 aa10.2□□□□□ -0.78
HDAC3-204ENST00000469207 VWFP04275 2813 aa10.2□□□□□ -0.78
HDAC3-204ENST00000469207 SRRM5B3KS81 715 aa10.19□□□□□ -0.78
HDAC3-204ENST00000469207 FCN3O75636 299 aa10.19□□□□□ -0.78
HDAC3-204ENST00000469207 RGS6P49758 472 aa10.19□□□□□ -0.78
HDAC3-204ENST00000469207 GSK3BP49841 420 aa10.19□□□□□ -0.78
HDAC3-204ENST00000469207 SLC7A2P52569 658 aa10.19□□□□□ -0.78
HDAC3-204ENST00000469207 ZNF181Q2M3W8 571 aa10.19□□□□□ -0.78
HDAC3-204ENST00000469207 FGD3Q5JSP0 725 aa10.19□□□□□ -0.78
HDAC3-204ENST00000469207 CLEC12AQ5QGZ9 265 aa10.19□□□□□ -0.78
HDAC3-204ENST00000469207 GPR139Q6DWJ6 353 aa10.19□□□□□ -0.78
HDAC3-204ENST00000469207 Q6YL49 198 aa10.19□□□□□ -0.78
HDAC3-204ENST00000469207 COLCA1Q6ZS62 124 aa10.19□□□□□ -0.78
HDAC3-204ENST00000469207 HDXQ7Z353 690 aa10.19□□□□□ -0.78
HDAC3-204ENST00000469207 RSRC1Q96IZ7 334 aaKnown RBP10.19□□□□□ -0.78
HDAC3-204ENST00000469207 ERMAPQ96PL5 475 aaPredicted RBP10.19□□□□□ -0.78
HDAC3-204ENST00000469207 NMNAT3Q96T66 252 aa10.19□□□□□ -0.78
HDAC3-204ENST00000469207 COQ7Q99807 217 aa10.19□□□□□ -0.78
HDAC3-204ENST00000469207 FN3KQ9H479 309 aa10.19□□□□□ -0.78
HDAC3-204ENST00000469207 PRDM13Q9H4Q3 707 aa10.19□□□□□ -0.78
HDAC3-204ENST00000469207 CAPN7Q9Y6W3 813 aa10.19□□□□□ -0.78
HDAC3-204ENST00000469207 IGLV1-36A0A0B4J1U3 117 aa10.18□□□□□ -0.78
HDAC3-204ENST00000469207 CENPVL3A0A0U1RRI6 287 aa10.18□□□□□ -0.78
HDAC3-204ENST00000469207 A0A1B0GWJ7 208 aa10.18□□□□□ -0.78
HDAC3-204ENST00000469207 UNC119BA6NIH7 251 aa10.18□□□□□ -0.78
HDAC3-204ENST00000469207 LRRC30A6NM36 301 aa10.18□□□□□ -0.78
HDAC3-204ENST00000469207 C3orf80F5H4A9 247 aa10.18□□□□□ -0.78
HDAC3-204ENST00000469207 IFNL4K9M1U5 179 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms