RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 NDUFB10O96000 172 aa1.84□□□□□ -2.11
SMC4-207ENST00000467263 CYB5R3P00387 301 aaPredicted RBP1.84□□□□□ -2.11
SMC4-207ENST00000467263 ARG1P05089 322 aa1.84□□□□□ -2.11
SMC4-207ENST00000467263 ZNF24P17028 368 aa1.84□□□□□ -2.11
SMC4-207ENST00000467263 ATF6P18850 670 aa1.84□□□□□ -2.11
SMC4-207ENST00000467263 EIF1P41567 113 aaKnown RBP1.84□□□□□ -2.11
SMC4-207ENST00000467263 RBM34P42696 430 aaKnown RBP1.84□□□□□ -2.11
SMC4-207ENST00000467263 PRLHRP49683 370 aa1.84□□□□□ -2.11
SMC4-207ENST00000467263 PRKCDQ05655 676 aa1.84□□□□□ -2.11
SMC4-207ENST00000467263 CYP24A1Q07973 514 aa1.84□□□□□ -2.11
SMC4-207ENST00000467263 SRSF5Q13243 272 aaKnown RBP1.84□□□□□ -2.11
SMC4-207ENST00000467263 ZNF266Q14584 549 aa1.84□□□□□ -2.11
SMC4-207ENST00000467263 PPP1R7Q15435 360 aa1.84□□□□□ -2.11
SMC4-207ENST00000467263 TEX30Q5JUR7 227 aa1.84□□□□□ -2.11
SMC4-207ENST00000467263 UBE2UQ5VVX9 321 aa1.84□□□□□ -2.11
SMC4-207ENST00000467263 OR13C2Q8NGS9 318 aa1.84□□□□□ -2.11
SMC4-207ENST00000467263 ECHDC3Q96DC8 303 aa1.84□□□□□ -2.11
SMC4-207ENST00000467263 TVP23CQ96ET8 276 aa1.84□□□□□ -2.11
SMC4-207ENST00000467263 COL21A1Q96P44 957 aa1.84□□□□□ -2.11
SMC4-207ENST00000467263 IP6K3Q96PC2 410 aa1.84□□□□□ -2.11
SMC4-207ENST00000467263 RHOXF2Q9BQY4 288 aa1.84□□□□□ -2.11
SMC4-207ENST00000467263 SHANK2-AS3Q9BTD1 123 aa1.84□□□□□ -2.11
SMC4-207ENST00000467263 ILKAPQ9H0C8 392 aaPredicted RBP1.84□□□□□ -2.11
SMC4-207ENST00000467263 RACGAP1Q9H0H5 632 aa1.84□□□□□ -2.11
SMC4-207ENST00000467263 NEUROG2Q9H2A3 272 aa1.84□□□□□ -2.11
SMC4-207ENST00000467263 SIGLEC7Q9Y286 467 aa1.84□□□□□ -2.11
SMC4-207ENST00000467263 AKNAQ7Z591 1439 aa1.83□□□□□ -2.12
SMC4-207ENST00000467263 SMIM26A0A096LP01 95 aa1.83□□□□□ -2.12
SMC4-207ENST00000467263 IGHV3-49A0A0A0MS15 119 aa1.83□□□□□ -2.12
SMC4-207ENST00000467263 IGHV3-72A0A0B4J1Y9 119 aa1.83□□□□□ -2.12
SMC4-207ENST00000467263 A0A1W2PNN7 141 aa1.83□□□□□ -2.12
SMC4-207ENST00000467263 PLPP1O14494 284 aa1.83□□□□□ -2.12
SMC4-207ENST00000467263 EIF4E2O60573 245 aaKnown RBP1.83□□□□□ -2.12
SMC4-207ENST00000467263 GLSO94925 669 aaPredicted RBP1.83□□□□□ -2.12
SMC4-207ENST00000467263 IGHV3-11P01762 117 aa1.83□□□□□ -2.12
SMC4-207ENST00000467263 TNFSF9P41273 254 aa1.83□□□□□ -2.12
SMC4-207ENST00000467263 EIF3EP60228 445 aaKnown RBP1.83□□□□□ -2.12
SMC4-207ENST00000467263 SP4Q02446 784 aa1.83□□□□□ -2.12
SMC4-207ENST00000467263 DGCR6Q14129 220 aa1.83□□□□□ -2.12
SMC4-207ENST00000467263 MAJINQ3KP22 176 aa1.83□□□□□ -2.12
SMC4-207ENST00000467263 KRTAP6-3Q3LI67 103 aa1.83□□□□□ -2.12
SMC4-207ENST00000467263 YIF1BQ5BJH7 314 aa1.83□□□□□ -2.12
SMC4-207ENST00000467263 FAM222AQ5U5X8 452 aa1.83□□□□□ -2.12
SMC4-207ENST00000467263 SLC8B1Q6J4K2 584 aa1.83□□□□□ -2.12
SMC4-207ENST00000467263 C12orf54Q6X4T0 127 aa1.83□□□□□ -2.12
SMC4-207ENST00000467263 CERS6Q6ZMG9 384 aa1.83□□□□□ -2.12
SMC4-207ENST00000467263 CMTM1Q8IZ96 169 aa1.83□□□□□ -2.12
SMC4-207ENST00000467263 ZNF645Q8N7E2 425 aa1.83□□□□□ -2.12
SMC4-207ENST00000467263 GPR26Q8NDV2 337 aa1.83□□□□□ -2.12
SMC4-207ENST00000467263 OR5T1Q8NG75 326 aa1.83□□□□□ -2.12
SMC4-207ENST00000467263 OR52E2Q8NGJ4 325 aa1.83□□□□□ -2.12
SMC4-207ENST00000467263 APH1BQ8WW43 257 aa1.83□□□□□ -2.12
SMC4-207ENST00000467263 LZTS2Q9BRK4 669 aa1.83□□□□□ -2.12
SMC4-207ENST00000467263 SAMD10Q9BYL1 202 aa1.83□□□□□ -2.12
SMC4-207ENST00000467263 NT5C3AQ9H0P0 336 aa1.83□□□□□ -2.12
SMC4-207ENST00000467263 ZSCAN16Q9H4T2 348 aaPredicted RBP1.83□□□□□ -2.12
SMC4-207ENST00000467263 TMEM27Q9HBJ8 222 aa1.83□□□□□ -2.12
SMC4-207ENST00000467263 ASB3Q9Y575 518 aa1.83□□□□□ -2.12
SMC4-207ENST00000467263 TRIP11Q15643 1979 aa1.83□□□□□ -2.12
SMC4-207ENST00000467263 LTBP4Q8N2S1 1624 aa1.82□□□□□ -2.12
SMC4-207ENST00000467263 A0A0J9YXV3 536 aa1.82□□□□□ -2.12
SMC4-207ENST00000467263 A0A1B0GW55 424 aa1.82□□□□□ -2.12
SMC4-207ENST00000467263 H7C1H1 209 aa1.82□□□□□ -2.12
SMC4-207ENST00000467263 K7EMT4 169 aa1.82□□□□□ -2.12
SMC4-207ENST00000467263 CLOCKO15516 846 aa1.82□□□□□ -2.12
SMC4-207ENST00000467263 PAHP00439 452 aa1.82□□□□□ -2.12
SMC4-207ENST00000467263 DUX4L2P0CJ85 424 aa1.82□□□□□ -2.12
SMC4-207ENST00000467263 DUX4L3P0CJ86 424 aa1.82□□□□□ -2.12
SMC4-207ENST00000467263 DUX4L5P0CJ88 424 aa1.82□□□□□ -2.12
SMC4-207ENST00000467263 DUX4L6P0CJ89 424 aa1.82□□□□□ -2.12
SMC4-207ENST00000467263 DUX4L7P0CJ90 424 aa1.82□□□□□ -2.12
SMC4-207ENST00000467263 DDX39BQ13838 428 aaKnown RBP1.82□□□□□ -2.12
SMC4-207ENST00000467263 SSX2Q16385 188 aa1.82□□□□□ -2.12
SMC4-207ENST00000467263 MRPL23Q16540 153 aaKnown RBP1.82□□□□□ -2.12
SMC4-207ENST00000467263 CDR2LQ86X02 465 aaPredicted RBP1.82□□□□□ -2.12
SMC4-207ENST00000467263 ZNF680Q8NEM1 530 aa1.82□□□□□ -2.12
SMC4-207ENST00000467263 NUBPLQ8TB37 319 aa1.82□□□□□ -2.12
SMC4-207ENST00000467263 KLF14Q8TD94 323 aaPredicted RBP1.82□□□□□ -2.12
SMC4-207ENST00000467263 CENPKQ9BS16 269 aa1.82□□□□□ -2.12
SMC4-207ENST00000467263 DUX4Q9UBX2 424 aa1.82□□□□□ -2.12
SMC4-207ENST00000467263 IGHV1-69DA0A0B4J2H0 117 aa1.81□□□□□ -2.12
SMC4-207ENST00000467263 IGHV1-3A0A0C4DH29 117 aa1.81□□□□□ -2.12
SMC4-207ENST00000467263 NCBP2LA6PVI3 153 aaKnown RBP1.81□□□□□ -2.12
SMC4-207ENST00000467263 CEACAM18A8MTB9 384 aa1.81□□□□□ -2.12
SMC4-207ENST00000467263 RAD51CO43502 376 aa1.81□□□□□ -2.12
SMC4-207ENST00000467263 FLOT1O75955 427 aa1.81□□□□□ -2.12
SMC4-207ENST00000467263 OR2J3O76001 311 aa1.81□□□□□ -2.12
SMC4-207ENST00000467263 SERPINE2P07093 398 aa1.81□□□□□ -2.12
SMC4-207ENST00000467263 PSMB5P28074 263 aa1.81□□□□□ -2.12
SMC4-207ENST00000467263 SLC1A1P43005 524 aa1.81□□□□□ -2.12
SMC4-207ENST00000467263 DMC1Q14565 340 aa1.81□□□□□ -2.12
SMC4-207ENST00000467263 NCF4Q15080 339 aa1.81□□□□□ -2.12
SMC4-207ENST00000467263 CHRNA6Q15825 494 aa1.81□□□□□ -2.12
SMC4-207ENST00000467263 C9orf135Q5VTT2 229 aa1.81□□□□□ -2.12
SMC4-207ENST00000467263 STUMQ69YW2 141 aa1.81□□□□□ -2.12
SMC4-207ENST00000467263 NPSR1Q6W5P4 371 aa1.81□□□□□ -2.12
SMC4-207ENST00000467263 TMEM136Q6ZRR5 245 aa1.81□□□□□ -2.12
SMC4-207ENST00000467263 FAM71AQ8IYT1 594 aa1.81□□□□□ -2.12
SMC4-207ENST00000467263 IQCKQ8N0W5 287 aa1.81□□□□□ -2.12
SMC4-207ENST00000467263 CBR4Q8N4T8 237 aa1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms