RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 VSTM5A8MXK1 200 aa13.79□□□□□ -0.2
GPC1-207ENST00000466624 F5H5K5 113 aa13.79□□□□□ -0.2
GPC1-207ENST00000466624 H3BSA7 217 aa13.79□□□□□ -0.2
GPC1-207ENST00000466624 SULT1C4O75897 302 aa13.79□□□□□ -0.2
GPC1-207ENST00000466624 CCDC159P0C7I6 412 aa13.79□□□□□ -0.2
GPC1-207ENST00000466624 PRF1P14222 555 aa13.79□□□□□ -0.2
GPC1-207ENST00000466624 DCKP27707 260 aa13.79□□□□□ -0.2
GPC1-207ENST00000466624 LRRN1Q6UXK5 716 aa13.79□□□□□ -0.2
GPC1-207ENST00000466624 C20orf204Q6ZNR8 217 aa13.79□□□□□ -0.2
GPC1-207ENST00000466624 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.79□□□□□ -0.2
GPC1-207ENST00000466624 ZNF101Q8IZC7 436 aa13.79□□□□□ -0.2
GPC1-207ENST00000466624 RFLNBQ8N5W9 214 aa13.79□□□□□ -0.2
GPC1-207ENST00000466624 OR52I1Q8NGK6 324 aa13.79□□□□□ -0.2
GPC1-207ENST00000466624 NEUROG1Q92886 237 aa13.79□□□□□ -0.2
GPC1-207ENST00000466624 APOBEC3DQ96AK3 386 aaPredicted RBP13.79□□□□□ -0.2
GPC1-207ENST00000466624 MRPL48Q96GC5 212 aaKnown RBP13.79□□□□□ -0.2
GPC1-207ENST00000466624 CNBD2Q96M20 576 aa13.79□□□□□ -0.2
GPC1-207ENST00000466624 DOK1Q99704 481 aa13.79□□□□□ -0.2
GPC1-207ENST00000466624 SP140LQ9H930 580 aa13.79□□□□□ -0.2
GPC1-207ENST00000466624 SLCO1C1Q9NYB5 712 aa13.79□□□□□ -0.2
GPC1-207ENST00000466624 PSORS1C1Q9UIG5 152 aa13.79□□□□□ -0.2
GPC1-207ENST00000466624 LRP12Q9Y561 859 aa13.79□□□□□ -0.2
GPC1-207ENST00000466624 CENPEQ02224 2701 aa13.79□□□□□ -0.2
GPC1-207ENST00000466624 CELSR2Q9HCU4 2923 aa13.79□□□□□ -0.2
GPC1-207ENST00000466624 ASH1LQ9NR48 2969 aaKnown RBP13.79□□□□□ -0.2
GPC1-207ENST00000466624 DAPL1A0PJW8 107 aa13.78□□□□□ -0.2
GPC1-207ENST00000466624 PRR32B1ATL7 298 aa13.78□□□□□ -0.2
GPC1-207ENST00000466624 SLC1A7O00341 560 aa13.78□□□□□ -0.2
GPC1-207ENST00000466624 FAM157BP0CG42 384 aa13.78□□□□□ -0.2
GPC1-207ENST00000466624 APOBEC3AP31941 199 aaPredicted RBP13.78□□□□□ -0.2
GPC1-207ENST00000466624 RIDAP52758 137 aaKnown RBP13.78□□□□□ -0.2
GPC1-207ENST00000466624 ZNF85Q03923 595 aa13.78□□□□□ -0.2
GPC1-207ENST00000466624 ZNF684Q5T5D7 378 aa13.78□□□□□ -0.2
GPC1-207ENST00000466624 PLEKHG7Q6ZR37 379 aa13.78□□□□□ -0.2
GPC1-207ENST00000466624 RFPL4BQ6ZWI9 263 aa13.78□□□□□ -0.2
GPC1-207ENST00000466624 SPATC1Q76KD6 591 aa13.78□□□□□ -0.2
GPC1-207ENST00000466624 SSX6Q7RTT6 188 aa13.78□□□□□ -0.2
GPC1-207ENST00000466624 KCTD20Q7Z5Y7 419 aa13.78□□□□□ -0.2
GPC1-207ENST00000466624 ZNF283Q8N7M2 679 aa13.78□□□□□ -0.2
GPC1-207ENST00000466624 BPIFB6Q8NFQ5 453 aa13.78□□□□□ -0.2
GPC1-207ENST00000466624 OR5L1Q8NGL2 311 aa13.78□□□□□ -0.2
GPC1-207ENST00000466624 ABHD4Q8TB40 342 aa13.78□□□□□ -0.2
GPC1-207ENST00000466624 TMEM171Q8WVE6 324 aa13.78□□□□□ -0.2
GPC1-207ENST00000466624 GGHQ92820 318 aa13.78□□□□□ -0.2
GPC1-207ENST00000466624 TBX5Q99593 518 aa13.78□□□□□ -0.2
GPC1-207ENST00000466624 FAIMQ9NVQ4 179 aa13.78□□□□□ -0.2
GPC1-207ENST00000466624 FKBP14Q9NWM8 211 aa13.78□□□□□ -0.2
GPC1-207ENST00000466624 IKZF2Q9UKS7 526 aa13.78□□□□□ -0.2
GPC1-207ENST00000466624 DIMT1Q9UNQ2 313 aaKnown RBP13.78□□□□□ -0.2
GPC1-207ENST00000466624 MYRFQ9Y2G1 1151 aa13.78□□□□□ -0.2
GPC1-207ENST00000466624 DSCAMO60469 2012 aa13.78□□□□□ -0.2
GPC1-207ENST00000466624 ACOD1A6NK06 481 aa13.77□□□□□ -0.21
GPC1-207ENST00000466624 XPNPEP2O43895 674 aa13.77□□□□□ -0.21
GPC1-207ENST00000466624 GPRIN2O60269 458 aa13.77□□□□□ -0.21
GPC1-207ENST00000466624 FAM20BO75063 409 aa13.77□□□□□ -0.21
GPC1-207ENST00000466624 NGFP01138 241 aa13.77□□□□□ -0.21
GPC1-207ENST00000466624 KRT8P05787 483 aa13.77□□□□□ -0.21
GPC1-207ENST00000466624 DANCRP0C864 163 aa13.77□□□□□ -0.21
GPC1-207ENST00000466624 THBS4P35443 961 aa13.77□□□□□ -0.21
GPC1-207ENST00000466624 CX3CR1P49238 355 aa13.77□□□□□ -0.21
GPC1-207ENST00000466624 PRKXP51817 358 aa13.77□□□□□ -0.21
GPC1-207ENST00000466624 PSMA6P60900 246 aaKnown RBP13.77□□□□□ -0.21
GPC1-207ENST00000466624 PPP1CBP62140 327 aa13.77□□□□□ -0.21
GPC1-207ENST00000466624 ACTA2P62736 377 aa13.77□□□□□ -0.21
GPC1-207ENST00000466624 ACTG2P63267 376 aa13.77□□□□□ -0.21
GPC1-207ENST00000466624 GALEQ14376 348 aa13.77□□□□□ -0.21
GPC1-207ENST00000466624 CDONQ4KMG0 1287 aa13.77□□□□□ -0.21
GPC1-207ENST00000466624 RGS7BPQ6MZT1 257 aaPredicted RBP13.77□□□□□ -0.21
GPC1-207ENST00000466624 OR1J1Q8NGS3 322 aa13.77□□□□□ -0.21
GPC1-207ENST00000466624 SNX33Q8WV41 574 aa13.77□□□□□ -0.21
GPC1-207ENST00000466624 TMEM80Q96HE8 168 aa13.77□□□□□ -0.21
GPC1-207ENST00000466624 ZNF649Q9BS31 505 aa13.77□□□□□ -0.21
GPC1-207ENST00000466624 UBTD1Q9HAC8 227 aa13.77□□□□□ -0.21
GPC1-207ENST00000466624 ERVK13-1Q9NX77 482 aa13.77□□□□□ -0.21
GPC1-207ENST00000466624 SCN3BQ9NY72 215 aa13.77□□□□□ -0.21
GPC1-207ENST00000466624 MRM2Q9UI43 246 aaKnown RBP13.77□□□□□ -0.21
GPC1-207ENST00000466624 CMAHPQ9Y471 501 aa13.77□□□□□ -0.21
GPC1-207ENST00000466624 METTL15A6NJ78 407 aa13.76□□□□□ -0.21
GPC1-207ENST00000466624 LCATP04180 440 aa13.76□□□□□ -0.21
GPC1-207ENST00000466624 LCKP06239 509 aa13.76□□□□□ -0.21
GPC1-207ENST00000466624 ZNF250P15622 560 aa13.76□□□□□ -0.21
GPC1-207ENST00000466624 TTKP33981 857 aa13.76□□□□□ -0.21
GPC1-207ENST00000466624 SLC6A9P48067 706 aa13.76□□□□□ -0.21
GPC1-207ENST00000466624 EVX1P49640 407 aa13.76□□□□□ -0.21
GPC1-207ENST00000466624 FABP6P51161 128 aa13.76□□□□□ -0.21
GPC1-207ENST00000466624 MMP16P51512 607 aa13.76□□□□□ -0.21
GPC1-207ENST00000466624 ST3GAL4Q11206 333 aa13.76□□□□□ -0.21
GPC1-207ENST00000466624 MED21Q13503 144 aa13.76□□□□□ -0.21
GPC1-207ENST00000466624 EFNB3Q15768 340 aa13.76□□□□□ -0.21
GPC1-207ENST00000466624 ADIPOQQ15848 244 aa13.76□□□□□ -0.21
GPC1-207ENST00000466624 ZNF829Q3KNS6 432 aaPredicted RBP13.76□□□□□ -0.21
GPC1-207ENST00000466624 RBM48Q5RL73 367 aaKnown RBP13.76□□□□□ -0.21
GPC1-207ENST00000466624 MBNL2Q5VZF2 373 aaKnown RBP13.76□□□□□ -0.21
GPC1-207ENST00000466624 PRSS45Q7RTY3 260 aa13.76□□□□□ -0.21
GPC1-207ENST00000466624 DTX2Q86UW9 622 aa13.76□□□□□ -0.21
GPC1-207ENST00000466624 FBXL14Q8N1E6 418 aa13.76□□□□□ -0.21
GPC1-207ENST00000466624 SYS1Q8N2H4 156 aa13.76□□□□□ -0.21
GPC1-207ENST00000466624 ZNF540Q8NDQ6 660 aa13.76□□□□□ -0.21
GPC1-207ENST00000466624 OR52H1Q8NGJ2 320 aa13.76□□□□□ -0.21
GPC1-207ENST00000466624 MRPL24Q96A35 216 aaKnown RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms