RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 NKPD1Q17RQ9 610 aa10.6□□□□□ -0.71
CHPF2-202ENST00000465601 CLEC12BQ2HXU8 276 aa10.6□□□□□ -0.71
CHPF2-202ENST00000465601 TMEM255AQ5JRV8 349 aa10.6□□□□□ -0.71
CHPF2-202ENST00000465601 LCN1P1Q5VSP4 162 aa10.6□□□□□ -0.71
CHPF2-202ENST00000465601 NXNL2Q5VZ03 156 aa10.6□□□□□ -0.71
CHPF2-202ENST00000465601 MBNL2Q5VZF2 373 aaKnown RBP10.6□□□□□ -0.71
CHPF2-202ENST00000465601 C1orf174Q8IYL3 243 aa10.6□□□□□ -0.71
CHPF2-202ENST00000465601 GALNT4Q8N4A0 578 aa10.6□□□□□ -0.71
CHPF2-202ENST00000465601 FAM81AQ8TBF8 368 aa10.6□□□□□ -0.71
CHPF2-202ENST00000465601 THEM6Q8WUY1 208 aa10.6□□□□□ -0.71
CHPF2-202ENST00000465601 IPCEF1Q8WWN9 437 aaPredicted RBP10.6□□□□□ -0.71
CHPF2-202ENST00000465601 SPTSSAQ969W0 71 aa10.6□□□□□ -0.71
CHPF2-202ENST00000465601 APOBEC3DQ96AK3 386 aaPredicted RBP10.6□□□□□ -0.71
CHPF2-202ENST00000465601 CMBLQ96DG6 245 aa10.6□□□□□ -0.71
CHPF2-202ENST00000465601 HRASLS5Q96KN8 279 aa10.6□□□□□ -0.71
CHPF2-202ENST00000465601 RAB1BQ9H0U4 201 aa10.6□□□□□ -0.71
CHPF2-202ENST00000465601 TPK1Q9H3S4 243 aa10.6□□□□□ -0.71
CHPF2-202ENST00000465601 BARX1Q9HBU1 254 aaPredicted RBP10.6□□□□□ -0.71
CHPF2-202ENST00000465601 DDX28Q9NUL7 540 aaKnown RBP10.6□□□□□ -0.71
CHPF2-202ENST00000465601 SLCO1C1Q9NYB5 712 aa10.6□□□□□ -0.71
CHPF2-202ENST00000465601 PTTG3PQ9NZH4 202 aa10.6□□□□□ -0.71
CHPF2-202ENST00000465601 FBXO9Q9UK97 447 aaPredicted RBP10.6□□□□□ -0.71
CHPF2-202ENST00000465601 ZNF878C9JN71 531 aa10.59□□□□□ -0.71
CHPF2-202ENST00000465601 M0R135 149 aa10.59□□□□□ -0.71
CHPF2-202ENST00000465601 F12P00748 615 aaPredicted RBP10.59□□□□□ -0.71
CHPF2-202ENST00000465601 LCATP04180 440 aa10.59□□□□□ -0.71
CHPF2-202ENST00000465601 SLC6A9P48067 706 aa10.59□□□□□ -0.71
CHPF2-202ENST00000465601 PSG7Q13046 419 aa10.59□□□□□ -0.71
CHPF2-202ENST00000465601 HLXQ14774 488 aaPredicted RBP10.59□□□□□ -0.71
CHPF2-202ENST00000465601 SLC16A9Q7RTY1 509 aa10.59□□□□□ -0.71
CHPF2-202ENST00000465601 ZNF454Q8N9F8 522 aa10.59□□□□□ -0.71
CHPF2-202ENST00000465601 OR5L1Q8NGL2 311 aa10.59□□□□□ -0.71
CHPF2-202ENST00000465601 OR8J1Q8NGP2 316 aa10.59□□□□□ -0.71
CHPF2-202ENST00000465601 OTOSQ8NHW6 89 aa10.59□□□□□ -0.71
CHPF2-202ENST00000465601 GTF3AQ92664 365 aaKnown RBP10.59□□□□□ -0.71
CHPF2-202ENST00000465601 ZNF799Q96GE5 643 aa10.59□□□□□ -0.71
CHPF2-202ENST00000465601 KCNJ15Q99712 375 aa10.59□□□□□ -0.71
CHPF2-202ENST00000465601 C1QTNF5Q9BXJ0 243 aa10.59□□□□□ -0.71
CHPF2-202ENST00000465601 MS4A5Q9H3V2 200 aa10.59□□□□□ -0.71
CHPF2-202ENST00000465601 IMPAD1Q9NX62 359 aa10.59□□□□□ -0.71
CHPF2-202ENST00000465601 DNAJC27Q9NZQ0 273 aa10.59□□□□□ -0.71
CHPF2-202ENST00000465601 GPR160Q9UJ42 338 aa10.59□□□□□ -0.71
CHPF2-202ENST00000465601 KLHDC2Q9Y2U9 406 aa10.59□□□□□ -0.71
CHPF2-202ENST00000465601 N6AMT1Q9Y5N5 214 aa10.59□□□□□ -0.71
CHPF2-202ENST00000465601 GMPPBQ9Y5P6 360 aa10.59□□□□□ -0.71
CHPF2-202ENST00000465601 YLPM1P49750 1951 aaKnown RBP10.59□□□□□ -0.71
CHPF2-202ENST00000465601 TRIM64A6NGJ6 449 aa10.58□□□□□ -0.72
CHPF2-202ENST00000465601 TRIM64BA6NI03 449 aa10.58□□□□□ -0.72
CHPF2-202ENST00000465601 SLC22A31A6NKX4 558 aa10.58□□□□□ -0.72
CHPF2-202ENST00000465601 H3BSA7 217 aa10.58□□□□□ -0.72
CHPF2-202ENST00000465601 LYNP07948 512 aa10.58□□□□□ -0.72
CHPF2-202ENST00000465601 SLC2A1P11166 492 aa10.58□□□□□ -0.72
CHPF2-202ENST00000465601 ALOX5APP20292 161 aa10.58□□□□□ -0.72
CHPF2-202ENST00000465601 TUBG1P23258 451 aa10.58□□□□□ -0.72
CHPF2-202ENST00000465601 PEX2P28328 305 aa10.58□□□□□ -0.72
CHPF2-202ENST00000465601 SLC15A1P46059 708 aa10.58□□□□□ -0.72
CHPF2-202ENST00000465601 MOGQ16653 247 aa10.58□□□□□ -0.72
CHPF2-202ENST00000465601 COLCA1Q6ZS62 124 aa10.58□□□□□ -0.72
CHPF2-202ENST00000465601 GID4Q8IVV7 300 aa10.58□□□□□ -0.72
CHPF2-202ENST00000465601 ZNF525Q8N782 197 aa10.58□□□□□ -0.72
CHPF2-202ENST00000465601 ZNF283Q8N7M2 679 aa10.58□□□□□ -0.72
CHPF2-202ENST00000465601 SNX33Q8WV41 574 aa10.58□□□□□ -0.72
CHPF2-202ENST00000465601 RNF133Q8WVZ7 376 aa10.58□□□□□ -0.72
CHPF2-202ENST00000465601 TRUB1Q8WWH5 349 aaKnown RBP10.58□□□□□ -0.72
CHPF2-202ENST00000465601 HAVCR1Q96D42 359 aa10.58□□□□□ -0.72
CHPF2-202ENST00000465601 COG8Q96MW5 612 aa10.58□□□□□ -0.72
CHPF2-202ENST00000465601 ZNF582Q96NG8 517 aaPredicted RBP10.58□□□□□ -0.72
CHPF2-202ENST00000465601 YIPF3Q9GZM5 350 aa10.58□□□□□ -0.72
CHPF2-202ENST00000465601 DCLRE1BQ9H816 532 aa10.58□□□□□ -0.72
CHPF2-202ENST00000465601 TUBG2Q9NRH3 451 aa10.58□□□□□ -0.72
CHPF2-202ENST00000465601 FAM118AQ9NWS6 357 aa10.58□□□□□ -0.72
CHPF2-202ENST00000465601 NKX1-2Q9UD57 310 aaPredicted RBP10.58□□□□□ -0.72
CHPF2-202ENST00000465601 AASSQ9UDR5 926 aa10.58□□□□□ -0.72
CHPF2-202ENST00000465601 LAMP5Q9UJQ1 280 aa10.58□□□□□ -0.72
CHPF2-202ENST00000465601 PURGQ9UJV8 347 aaKnown RBP10.58□□□□□ -0.72
CHPF2-202ENST00000465601 CR1P17927 2039 aa10.58□□□□□ -0.72
CHPF2-202ENST00000465601 LOC100130705A0A1B0GUX0 176 aa10.57□□□□□ -0.72
CHPF2-202ENST00000465601 C5orf63A6NC05 138 aa10.57□□□□□ -0.72
CHPF2-202ENST00000465601 C17orf100A8MU93 164 aa10.57□□□□□ -0.72
CHPF2-202ENST00000465601 J3QW42 95 aa10.57□□□□□ -0.72
CHPF2-202ENST00000465601 DLGAP1O14490 977 aa10.57□□□□□ -0.72
CHPF2-202ENST00000465601 TIMM8AO60220 97 aaPredicted RBP10.57□□□□□ -0.72
CHPF2-202ENST00000465601 ERCC1P07992 297 aaPredicted RBP10.57□□□□□ -0.72
CHPF2-202ENST00000465601 H2BFMP0C1H6 154 aa10.57□□□□□ -0.72
CHPF2-202ENST00000465601 CD99P14209 185 aa10.57□□□□□ -0.72
CHPF2-202ENST00000465601 RAC2P15153 192 aa10.57□□□□□ -0.72
CHPF2-202ENST00000465601 ANOS1P23352 680 aa10.57□□□□□ -0.72
CHPF2-202ENST00000465601 HSD11B1P28845 292 aa10.57□□□□□ -0.72
CHPF2-202ENST00000465601 HTR1FP30939 366 aa10.57□□□□□ -0.72
CHPF2-202ENST00000465601 OTX1P32242 354 aaPredicted RBP10.57□□□□□ -0.72
CHPF2-202ENST00000465601 OPRL1P41146 370 aa10.57□□□□□ -0.72
CHPF2-202ENST00000465601 CX3CR1P49238 355 aa10.57□□□□□ -0.72
CHPF2-202ENST00000465601 MMP15P51511 669 aa10.57□□□□□ -0.72
CHPF2-202ENST00000465601 PRSS12P56730 875 aa10.57□□□□□ -0.72
CHPF2-202ENST00000465601 GRB2P62993 217 aaKnown RBP10.57□□□□□ -0.72
CHPF2-202ENST00000465601 TNK1Q13470 666 aa10.57□□□□□ -0.72
CHPF2-202ENST00000465601 GGTLC2Q14390 218 aa10.57□□□□□ -0.72
CHPF2-202ENST00000465601 CARTPTQ16568 116 aa10.57□□□□□ -0.72
CHPF2-202ENST00000465601 SNAI3Q3KNW1 292 aa10.57□□□□□ -0.72
CHPF2-202ENST00000465601 DRAM2Q6UX65 266 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms