RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 SLC30A2Q9BRI3 323 aa12.08□□□□□ -0.48
SNRNP40-203ENST00000463988 C1QTNF5Q9BXJ0 243 aa12.08□□□□□ -0.48
SNRNP40-203ENST00000463988 NSRP1Q9H0G5 558 aaKnown RBP12.08□□□□□ -0.48
SNRNP40-203ENST00000463988 SRA1Q9HD15 236 aaKnown RBP12.08□□□□□ -0.48
SNRNP40-203ENST00000463988 IL1RAPQ9NPH3 570 aa12.08□□□□□ -0.48
SNRNP40-203ENST00000463988 PTTG3PQ9NZH4 202 aa12.08□□□□□ -0.48
SNRNP40-203ENST00000463988 CD300AQ9UGN4 299 aa12.08□□□□□ -0.48
SNRNP40-203ENST00000463988 TRAPPC2LH3BP13 241 aa12.07□□□□□ -0.48
SNRNP40-203ENST00000463988 OR10H3O60404 316 aa12.07□□□□□ -0.48
SNRNP40-203ENST00000463988 GPANK1O95872 356 aa12.07□□□□□ -0.48
SNRNP40-203ENST00000463988 HIST1H1CP16403 213 aaKnown RBP12.07□□□□□ -0.48
SNRNP40-203ENST00000463988 GSSP48637 474 aa12.07□□□□□ -0.48
SNRNP40-203ENST00000463988 ZNF154Q13106 437 aa12.07□□□□□ -0.48
SNRNP40-203ENST00000463988 HNRNPA0Q13151 305 aaKnown RBP12.07□□□□□ -0.48
SNRNP40-203ENST00000463988 ESCO2Q56NI9 601 aa12.07□□□□□ -0.48
SNRNP40-203ENST00000463988 SLC18B1Q6NT16 456 aa12.07□□□□□ -0.48
SNRNP40-203ENST00000463988 CORO6Q6QEF8 472 aa12.07□□□□□ -0.48
SNRNP40-203ENST00000463988 OR5AS1Q8N127 324 aa12.07□□□□□ -0.48
SNRNP40-203ENST00000463988 OR4K13Q8NH42 304 aa12.07□□□□□ -0.48
SNRNP40-203ENST00000463988 NSMCE2Q96MF7 247 aa12.07□□□□□ -0.48
SNRNP40-203ENST00000463988 IFT27Q9BW83 186 aa12.07□□□□□ -0.48
SNRNP40-203ENST00000463988 HCAR1Q9BXC0 346 aa12.07□□□□□ -0.48
SNRNP40-203ENST00000463988 MMP26Q9NRE1 261 aa12.07□□□□□ -0.48
SNRNP40-203ENST00000463988 CYB5R1Q9UHQ9 305 aa12.07□□□□□ -0.48
SNRNP40-203ENST00000463988 KCNG2Q9UJ96 466 aa12.07□□□□□ -0.48
SNRNP40-203ENST00000463988 TMCC3Q9ULS5 477 aa12.07□□□□□ -0.48
SNRNP40-203ENST00000463988 LRCH1Q9Y2L9 728 aa12.07□□□□□ -0.48
SNRNP40-203ENST00000463988 INSIG2Q9Y5U4 225 aa12.07□□□□□ -0.48
SNRNP40-203ENST00000463988 AUP1Q9Y679 476 aa12.07□□□□□ -0.48
SNRNP40-203ENST00000463988 LRRC30A6NM36 301 aa12.06□□□□□ -0.48
SNRNP40-203ENST00000463988 CEACAM18A8MTB9 384 aa12.06□□□□□ -0.48
SNRNP40-203ENST00000463988 ARPC2O15144 300 aa12.06□□□□□ -0.48
SNRNP40-203ENST00000463988 KRT36O76013 467 aa12.06□□□□□ -0.48
SNRNP40-203ENST00000463988 FABP3P05413 133 aa12.06□□□□□ -0.48
SNRNP40-203ENST00000463988 WNT2P09544 360 aa12.06□□□□□ -0.48
SNRNP40-203ENST00000463988 ACSM4P0C7M7 580 aa12.06□□□□□ -0.48
SNRNP40-203ENST00000463988 NOS3P29474 1203 aa12.06□□□□□ -0.48
SNRNP40-203ENST00000463988 HMGA2P52926 109 aa12.06□□□□□ -0.48
SNRNP40-203ENST00000463988 TSPAN31Q12999 210 aa12.06□□□□□ -0.48
SNRNP40-203ENST00000463988 ZNF620Q6ZNG0 422 aa12.06□□□□□ -0.48
SNRNP40-203ENST00000463988 CPLX4Q7Z7G2 160 aa12.06□□□□□ -0.48
SNRNP40-203ENST00000463988 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.06□□□□□ -0.48
SNRNP40-203ENST00000463988 CELF2-AS1Q8N7Q2 184 aa12.06□□□□□ -0.48
SNRNP40-203ENST00000463988 ZDHHC22Q8N966 263 aa12.06□□□□□ -0.48
SNRNP40-203ENST00000463988 OR10AD1Q8NGE0 317 aa12.06□□□□□ -0.48
SNRNP40-203ENST00000463988 OR2AJ1Q8NGZ0 328 aa12.06□□□□□ -0.48
SNRNP40-203ENST00000463988 GNPDA2Q8TDQ7 276 aa12.06□□□□□ -0.48
SNRNP40-203ENST00000463988 ZMYND19Q96E35 227 aaPredicted RBP12.06□□□□□ -0.48
SNRNP40-203ENST00000463988 CDRT15Q96T59 188 aa12.06□□□□□ -0.48
SNRNP40-203ENST00000463988 PITX2Q99697 317 aa12.06□□□□□ -0.48
SNRNP40-203ENST00000463988 ATF6BQ99941 703 aa12.06□□□□□ -0.48
SNRNP40-203ENST00000463988 MRI1Q9BV20 369 aa12.06□□□□□ -0.48
SNRNP40-203ENST00000463988 FAM107BQ9H098 131 aa12.06□□□□□ -0.48
SNRNP40-203ENST00000463988 TMEM165Q9HC07 324 aa12.06□□□□□ -0.48
SNRNP40-203ENST00000463988 ESM1Q9NQ30 184 aa12.06□□□□□ -0.48
SNRNP40-203ENST00000463988 RPRD1BQ9NQG5 326 aaKnown RBP12.06□□□□□ -0.48
SNRNP40-203ENST00000463988 TMEM100Q9NV29 134 aa12.06□□□□□ -0.48
SNRNP40-203ENST00000463988 NDE1Q9NXR1 346 aa12.06□□□□□ -0.48
SNRNP40-203ENST00000463988 NUP50Q9UKX7 468 aa12.06□□□□□ -0.48
SNRNP40-203ENST00000463988 V9GYQ6 96 aa12.06□□□□□ -0.48
SNRNP40-203ENST00000463988 OR6C68A6NDL8 312 aa12.05□□□□□ -0.48
SNRNP40-203ENST00000463988 MLNRO43193 412 aa12.05□□□□□ -0.48
SNRNP40-203ENST00000463988 PPIAL4GP0DN37 164 aa12.05□□□□□ -0.48
SNRNP40-203ENST00000463988 RRM2P31350 389 aa12.05□□□□□ -0.48
SNRNP40-203ENST00000463988 GGT2P36268 569 aa12.05□□□□□ -0.48
SNRNP40-203ENST00000463988 GATA4P43694 442 aa12.05□□□□□ -0.48
SNRNP40-203ENST00000463988 SEC61A1P61619 476 aaKnown RBP12.05□□□□□ -0.48
SNRNP40-203ENST00000463988 UBA52P62987 128 aaKnown RBP12.05□□□□□ -0.48
SNRNP40-203ENST00000463988 PAX8Q06710 450 aa12.05□□□□□ -0.48
SNRNP40-203ENST00000463988 ARMCX4Q5H9R4 360 aa12.05□□□□□ -0.48
SNRNP40-203ENST00000463988 RPL13AP3Q6NVV1 102 aa12.05□□□□□ -0.48
SNRNP40-203ENST00000463988 RBMS3Q6XE24 437 aaKnown RBP12.05□□□□□ -0.48
SNRNP40-203ENST00000463988 CFAP77Q6ZQR2 320 aa12.05□□□□□ -0.48
SNRNP40-203ENST00000463988 C1orf87Q8N0U7 546 aa12.05□□□□□ -0.48
SNRNP40-203ENST00000463988 LINC00471Q8N535 108 aa12.05□□□□□ -0.48
SNRNP40-203ENST00000463988 C3orf56Q8N813 242 aa12.05□□□□□ -0.48
SNRNP40-203ENST00000463988 ERGIC1Q969X5 290 aa12.05□□□□□ -0.48
SNRNP40-203ENST00000463988 CDADC1Q9BWV3 514 aa12.05□□□□□ -0.48
SNRNP40-203ENST00000463988 DDX28Q9NUL7 540 aaKnown RBP12.05□□□□□ -0.48
SNRNP40-203ENST00000463988 MIOXQ9UGB7 285 aa12.05□□□□□ -0.48
SNRNP40-203ENST00000463988 OR5V1Q9UGF6 321 aa12.05□□□□□ -0.48
SNRNP40-203ENST00000463988 TAGLN3Q9UI15 199 aa12.05□□□□□ -0.48
SNRNP40-203ENST00000463988 F5H5K5 113 aa12.04□□□□□ -0.48
SNRNP40-203ENST00000463988 H0YL77 283 aa12.04□□□□□ -0.48
SNRNP40-203ENST00000463988 MSX2P35548 267 aaPredicted RBP12.04□□□□□ -0.48
SNRNP40-203ENST00000463988 RBMXP38159 391 aaKnown RBP12.04□□□□□ -0.48
SNRNP40-203ENST00000463988 TPTEP56180 551 aa12.04□□□□□ -0.48
SNRNP40-203ENST00000463988 PAX2Q02962 417 aa12.04□□□□□ -0.48
SNRNP40-203ENST00000463988 TRAP1Q12931 704 aaKnown RBP12.04□□□□□ -0.48
SNRNP40-203ENST00000463988 MALLQ13021 153 aa12.04□□□□□ -0.48
SNRNP40-203ENST00000463988 GK2Q14410 553 aaPredicted RBP12.04□□□□□ -0.48
SNRNP40-203ENST00000463988 KLF17Q5JT82 389 aaPredicted RBP12.04□□□□□ -0.48
SNRNP40-203ENST00000463988 PGBD2Q6P3X8 592 aa12.04□□□□□ -0.48
SNRNP40-203ENST00000463988 C16orf89Q6UX73 402 aa12.04□□□□□ -0.48
SNRNP40-203ENST00000463988 DOK3Q7L591 496 aa12.04□□□□□ -0.48
SNRNP40-203ENST00000463988 LINC00346Q8IVM7 164 aa12.04□□□□□ -0.48
SNRNP40-203ENST00000463988 ZDHHC21Q8IVQ6 265 aa12.04□□□□□ -0.48
SNRNP40-203ENST00000463988 BHLHE23Q8NDY6 225 aa12.04□□□□□ -0.48
SNRNP40-203ENST00000463988 SDR9C7Q8NEX9 313 aa12.04□□□□□ -0.48
SNRNP40-203ENST00000463988 OR52E2Q8NGJ4 325 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms