RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 NKIRAS2Q9NYR9 191 aa13.52□□□□□ -0.25
ERCC3-206ENST00000462306 CR1P17927 2039 aa13.52□□□□□ -0.25
ERCC3-206ENST00000462306 CSPG4Q6UVK1 2322 aa13.51□□□□□ -0.25
ERCC3-206ENST00000462306 ZSCAN5BA6NJL1 495 aa13.51□□□□□ -0.25
ERCC3-206ENST00000462306 LYNX1G3V0Z9 82 aa13.51□□□□□ -0.25
ERCC3-206ENST00000462306 PRKYO43930 277 aa13.51□□□□□ -0.25
ERCC3-206ENST00000462306 LYNX1P0DP58 116 aa13.51□□□□□ -0.25
ERCC3-206ENST00000462306 KITLGP21583 273 aa13.51□□□□□ -0.25
ERCC3-206ENST00000462306 GIFP27352 417 aa13.51□□□□□ -0.25
ERCC3-206ENST00000462306 POLR2IP36954 125 aaKnown RBP13.51□□□□□ -0.25
ERCC3-206ENST00000462306 NR4A2P43354 598 aa13.51□□□□□ -0.25
ERCC3-206ENST00000462306 ZNF81P51508 661 aa13.51□□□□□ -0.25
ERCC3-206ENST00000462306 EFNB1P98172 346 aa13.51□□□□□ -0.25
ERCC3-206ENST00000462306 KRTAP1-1Q07627 177 aa13.51□□□□□ -0.25
ERCC3-206ENST00000462306 LOXL1Q08397 574 aaPredicted RBP13.51□□□□□ -0.25
ERCC3-206ENST00000462306 CARTPTQ16568 116 aa13.51□□□□□ -0.25
ERCC3-206ENST00000462306 SLC35D3Q5M8T2 416 aa13.51□□□□□ -0.25
ERCC3-206ENST00000462306 C12orf73Q69YU5 71 aa13.51□□□□□ -0.25
ERCC3-206ENST00000462306 CLEC9AQ6UXN8 241 aa13.51□□□□□ -0.25
ERCC3-206ENST00000462306 FBXW12Q6X9E4 464 aa13.51□□□□□ -0.25
ERCC3-206ENST00000462306 CXXC5Q7LFL8 322 aaKnown RBP13.51□□□□□ -0.25
ERCC3-206ENST00000462306 DPY19L4Q7Z388 723 aa13.51□□□□□ -0.25
ERCC3-206ENST00000462306 ERI1Q8IV48 349 aaKnown RBP13.51□□□□□ -0.25
ERCC3-206ENST00000462306 OR6N2Q8NGY6 317 aa13.51□□□□□ -0.25
ERCC3-206ENST00000462306 SLAMF6Q96DU3 332 aa13.51□□□□□ -0.25
ERCC3-206ENST00000462306 PIMREGQ9BSJ6 248 aa13.51□□□□□ -0.25
ERCC3-206ENST00000462306 PURGQ9UJV8 347 aaKnown RBP13.51□□□□□ -0.25
ERCC3-206ENST00000462306 M0R129 80 aa13.5□□□□□ -0.25
ERCC3-206ENST00000462306 M0R135 149 aa13.5□□□□□ -0.25
ERCC3-206ENST00000462306 IGHV1-46P01743 117 aa13.5□□□□□ -0.25
ERCC3-206ENST00000462306 MT-ND5P03915 603 aa13.5□□□□□ -0.25
ERCC3-206ENST00000462306 ADH4P08319 380 aa13.5□□□□□ -0.25
ERCC3-206ENST00000462306 RAC2P15153 192 aa13.5□□□□□ -0.25
ERCC3-206ENST00000462306 COL8A2P25067 703 aa13.5□□□□□ -0.25
ERCC3-206ENST00000462306 TPTEP56180 551 aa13.5□□□□□ -0.25
ERCC3-206ENST00000462306 CCL8P80075 99 aa13.5□□□□□ -0.25
ERCC3-206ENST00000462306 EIF2B1Q14232 305 aaKnown RBP13.5□□□□□ -0.25
ERCC3-206ENST00000462306 HLXQ14774 488 aaPredicted RBP13.5□□□□□ -0.25
ERCC3-206ENST00000462306 PCGF3Q3KNV8 242 aa13.5□□□□□ -0.25
ERCC3-206ENST00000462306 KLHL12Q53G59 568 aa13.5□□□□□ -0.25
ERCC3-206ENST00000462306 OR5L1Q8NGL2 311 aa13.5□□□□□ -0.25
ERCC3-206ENST00000462306 ZNF799Q96GE5 643 aa13.5□□□□□ -0.25
ERCC3-206ENST00000462306 AMELYQ99218 206 aa13.5□□□□□ -0.25
ERCC3-206ENST00000462306 RBM4BQ9BQ04 359 aaKnown RBP13.5□□□□□ -0.25
ERCC3-206ENST00000462306 ABHD6Q9BV23 337 aa13.5□□□□□ -0.25
ERCC3-206ENST00000462306 GABARAPL3Q9BY60 117 aa13.5□□□□□ -0.25
ERCC3-206ENST00000462306 S100A14Q9HCY8 104 aa13.5□□□□□ -0.25
ERCC3-206ENST00000462306 CYSLTR2Q9NS75 346 aa13.5□□□□□ -0.25
ERCC3-206ENST00000462306 PTTG3PQ9NZH4 202 aa13.5□□□□□ -0.25
ERCC3-206ENST00000462306 CGGBP1Q9UFW8 167 aaPredicted RBP13.5□□□□□ -0.25
ERCC3-206ENST00000462306 ENOPH1Q9UHY7 261 aa13.5□□□□□ -0.25
ERCC3-206ENST00000462306 TLN2Q9Y4G6 2542 aa13.49□□□□□ -0.25
ERCC3-206ENST00000462306 PLSCR5A0PG75 271 aa13.49□□□□□ -0.25
ERCC3-206ENST00000462306 CCDC182A6NF36 153 aa13.49□□□□□ -0.25
ERCC3-206ENST00000462306 TIMM8AO60220 97 aaPredicted RBP13.49□□□□□ -0.25
ERCC3-206ENST00000462306 SELENOFO60613 162 aa13.49□□□□□ -0.25
ERCC3-206ENST00000462306 ALPLP05186 524 aa13.49□□□□□ -0.25
ERCC3-206ENST00000462306 HEXAP06865 529 aa13.49□□□□□ -0.25
ERCC3-206ENST00000462306 ANOS1P23352 680 aa13.49□□□□□ -0.25
ERCC3-206ENST00000462306 LIPAP38571 399 aa13.49□□□□□ -0.25
ERCC3-206ENST00000462306 MRPS11P82912 194 aaKnown RBP13.49□□□□□ -0.25
ERCC3-206ENST00000462306 RIN1Q13671 783 aa13.49□□□□□ -0.25
ERCC3-206ENST00000462306 APOFQ13790 326 aa13.49□□□□□ -0.25
ERCC3-206ENST00000462306 Q6ZR03 302 aa13.49□□□□□ -0.25
ERCC3-206ENST00000462306 Q71RC1 249 aaPredicted RBP13.49□□□□□ -0.25
ERCC3-206ENST00000462306 SHFQ7M4L6 423 aa13.49□□□□□ -0.25
ERCC3-206ENST00000462306 RNF133Q8WVZ7 376 aa13.49□□□□□ -0.25
ERCC3-206ENST00000462306 RDH5Q92781 318 aa13.49□□□□□ -0.25
ERCC3-206ENST00000462306 YIPF5Q969M3 257 aa13.49□□□□□ -0.25
ERCC3-206ENST00000462306 SPTSSAQ969W0 71 aa13.49□□□□□ -0.25
ERCC3-206ENST00000462306 TEAD3Q99594 435 aa13.49□□□□□ -0.25
ERCC3-206ENST00000462306 KCNJ15Q99712 375 aa13.49□□□□□ -0.25
ERCC3-206ENST00000462306 COPS4Q9BT78 406 aa13.49□□□□□ -0.25
ERCC3-206ENST00000462306 PRRG3Q9BZD7 231 aa13.49□□□□□ -0.25
ERCC3-206ENST00000462306 BPESC1Q9GZL8 116 aa13.49□□□□□ -0.25
ERCC3-206ENST00000462306 MSL2Q9HCI7 577 aa13.49□□□□□ -0.25
ERCC3-206ENST00000462306 CENPMQ9NSP4 180 aa13.49□□□□□ -0.25
ERCC3-206ENST00000462306 USE1Q9NZ43 259 aa13.49□□□□□ -0.25
ERCC3-206ENST00000462306 C5orf63A6NC05 138 aa13.48□□□□□ -0.25
ERCC3-206ENST00000462306 ZNF878C9JN71 531 aa13.48□□□□□ -0.25
ERCC3-206ENST00000462306 SPRY3O43610 288 aa13.48□□□□□ -0.25
ERCC3-206ENST00000462306 TLX2O43763 284 aaPredicted RBP13.48□□□□□ -0.25
ERCC3-206ENST00000462306 RP2O75695 350 aa13.48□□□□□ -0.25
ERCC3-206ENST00000462306 LCATP04180 440 aa13.48□□□□□ -0.25
ERCC3-206ENST00000462306 USF1P22415 310 aaPredicted RBP13.48□□□□□ -0.25
ERCC3-206ENST00000462306 RPS7P62081 194 aaKnown RBP13.48□□□□□ -0.25
ERCC3-206ENST00000462306 CDK5R2Q13319 367 aa13.48□□□□□ -0.25
ERCC3-206ENST00000462306 TSTQ16762 297 aaKnown RBP13.48□□□□□ -0.25
ERCC3-206ENST00000462306 FAM209AQ5JX71 171 aa13.48□□□□□ -0.25
ERCC3-206ENST00000462306 AADACL4Q5VUY2 407 aa13.48□□□□□ -0.25
ERCC3-206ENST00000462306 DRAM2Q6UX65 266 aa13.48□□□□□ -0.25
ERCC3-206ENST00000462306 SPATC1Q76KD6 591 aa13.48□□□□□ -0.25
ERCC3-206ENST00000462306 BCDIN3DQ7Z5W3 292 aaKnown RBP13.48□□□□□ -0.25
ERCC3-206ENST00000462306 TCEANCQ8N8B7 351 aa13.48□□□□□ -0.25
ERCC3-206ENST00000462306 ZNF540Q8NDQ6 660 aa13.48□□□□□ -0.25
ERCC3-206ENST00000462306 OTOSQ8NHW6 89 aa13.48□□□□□ -0.25
ERCC3-206ENST00000462306 SETD2Q9BYW2 2564 aaPredicted RBP13.47□□□□□ -0.25
ERCC3-206ENST00000462306 IGHV4-61A0A0C4DH41 118 aa13.47□□□□□ -0.25
ERCC3-206ENST00000462306 EI24O14681 340 aa13.47□□□□□ -0.25
ERCC3-206ENST00000462306 CD55P08174 381 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms