RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 FANK1Q8TC84 345 aa7.72□□□□□ -1.17
BRCA1-207ENST00000461798 SIGLEC11Q96RL6 698 aa7.72□□□□□ -1.17
BRCA1-207ENST00000461798 IFT27Q9BW83 186 aa7.72□□□□□ -1.17
BRCA1-207ENST00000461798 C1QTNF5Q9BXJ0 243 aa7.72□□□□□ -1.17
BRCA1-207ENST00000461798 TRIM15Q9C019 465 aa7.72□□□□□ -1.17
BRCA1-207ENST00000461798 PATZ1Q9HBE1 687 aaKnown RBP7.72□□□□□ -1.17
BRCA1-207ENST00000461798 GCM1Q9NP62 436 aa7.72□□□□□ -1.17
BRCA1-207ENST00000461798 DCAF16Q9NXF7 216 aa7.72□□□□□ -1.17
BRCA1-207ENST00000461798 IL20Q9NYY1 176 aa7.72□□□□□ -1.17
BRCA1-207ENST00000461798 ACTR3BQ9P1U1 418 aa7.72□□□□□ -1.17
BRCA1-207ENST00000461798 OPN4Q9UHM6 478 aa7.72□□□□□ -1.17
BRCA1-207ENST00000461798 CYB5R1Q9UHQ9 305 aa7.72□□□□□ -1.17
BRCA1-207ENST00000461798 KCNG2Q9UJ96 466 aa7.72□□□□□ -1.17
BRCA1-207ENST00000461798 LOC105371242A0A075B767 164 aa7.71□□□□□ -1.18
BRCA1-207ENST00000461798 IQCF6A8MYZ5 107 aa7.71□□□□□ -1.18
BRCA1-207ENST00000461798 F5H0A9 414 aaPredicted RBP7.71□□□□□ -1.18
BRCA1-207ENST00000461798 TMEM178BH3BS89 294 aa7.71□□□□□ -1.18
BRCA1-207ENST00000461798 SBK2P0C263 348 aa7.71□□□□□ -1.18
BRCA1-207ENST00000461798 ACSM4P0C7M7 580 aa7.71□□□□□ -1.18
BRCA1-207ENST00000461798 EPHA1P21709 976 aa7.71□□□□□ -1.18
BRCA1-207ENST00000461798 ZFP36P26651 326 aaKnown RBP7.71□□□□□ -1.18
BRCA1-207ENST00000461798 RRM2P31350 389 aa7.71□□□□□ -1.18
BRCA1-207ENST00000461798 MAGEA2P43356 314 aa7.71□□□□□ -1.18
BRCA1-207ENST00000461798 SLC6A9P48067 706 aa7.71□□□□□ -1.18
BRCA1-207ENST00000461798 HILS1P60008 231 aa7.71□□□□□ -1.18
BRCA1-207ENST00000461798 GNGT1P63211 74 aa7.71□□□□□ -1.18
BRCA1-207ENST00000461798 MEP1BQ16820 701 aa7.71□□□□□ -1.18
BRCA1-207ENST00000461798 ZNF181Q2M3W8 571 aa7.71□□□□□ -1.18
BRCA1-207ENST00000461798 ZNF362Q5T0B9 420 aaPredicted RBP7.71□□□□□ -1.18
BRCA1-207ENST00000461798 DCAF12L2Q5VW00 463 aa7.71□□□□□ -1.18
BRCA1-207ENST00000461798 OR2T2Q6IF00 324 aa7.71□□□□□ -1.18
BRCA1-207ENST00000461798 ZNF770Q6IQ21 691 aaPredicted RBP7.71□□□□□ -1.18
BRCA1-207ENST00000461798 RPL13AP3Q6NVV1 102 aa7.71□□□□□ -1.18
BRCA1-207ENST00000461798 CORO6Q6QEF8 472 aa7.71□□□□□ -1.18
BRCA1-207ENST00000461798 ZNF620Q6ZNG0 422 aa7.71□□□□□ -1.18
BRCA1-207ENST00000461798 JAZF1Q86VZ6 243 aa7.71□□□□□ -1.18
BRCA1-207ENST00000461798 ZDHHC21Q8IVQ6 265 aa7.71□□□□□ -1.18
BRCA1-207ENST00000461798 DEFB107AQ8IZN7 70 aa7.71□□□□□ -1.18
BRCA1-207ENST00000461798 ARHGAP24Q8N264 748 aa7.71□□□□□ -1.18
BRCA1-207ENST00000461798 OR4C15Q8NGM1 316 aa7.71□□□□□ -1.18
BRCA1-207ENST00000461798 NANPQ8TBE9 248 aa7.71□□□□□ -1.18
BRCA1-207ENST00000461798 ST7LQ8TDW4 575 aa7.71□□□□□ -1.18
BRCA1-207ENST00000461798 ZNF418Q8TF45 676 aaPredicted RBP7.71□□□□□ -1.18
BRCA1-207ENST00000461798 ITLN1Q8WWA0 313 aa7.71□□□□□ -1.18
BRCA1-207ENST00000461798 ZNF582Q96NG8 517 aaPredicted RBP7.71□□□□□ -1.18
BRCA1-207ENST00000461798 OR2V2Q96R30 315 aa7.71□□□□□ -1.18
BRCA1-207ENST00000461798 SLC30A2Q9BRI3 323 aa7.71□□□□□ -1.18
BRCA1-207ENST00000461798 C7orf69Q9H7B7 122 aa7.71□□□□□ -1.18
BRCA1-207ENST00000461798 PNRC2Q9NPJ4 139 aaKnown RBP7.71□□□□□ -1.18
BRCA1-207ENST00000461798 MRPL22Q9NWU5 206 aaKnown RBP7.71□□□□□ -1.18
BRCA1-207ENST00000461798 PCDHB10Q9UN67 800 aa7.71□□□□□ -1.18
BRCA1-207ENST00000461798 PPP1R3CQ9UQK1 317 aa7.71□□□□□ -1.18
BRCA1-207ENST00000461798 POLR1DQ9Y2S0 133 aa7.71□□□□□ -1.18
BRCA1-207ENST00000461798 LYVE1Q9Y5Y7 322 aa7.71□□□□□ -1.18
BRCA1-207ENST00000461798 V9GYQ6 96 aa7.71□□□□□ -1.18
BRCA1-207ENST00000461798 ISPDA4D126 451 aa7.7□□□□□ -1.18
BRCA1-207ENST00000461798 A8MXK9 166 aa7.7□□□□□ -1.18
BRCA1-207ENST00000461798 TNFRSF11BO00300 401 aa7.7□□□□□ -1.18
BRCA1-207ENST00000461798 BHLHE40O14503 412 aa7.7□□□□□ -1.18
BRCA1-207ENST00000461798 WNT2P09544 360 aa7.7□□□□□ -1.18
BRCA1-207ENST00000461798 SELEP16581 610 aa7.7□□□□□ -1.18
BRCA1-207ENST00000461798 ADRA2CP18825 462 aa7.7□□□□□ -1.18
BRCA1-207ENST00000461798 NOS3P29474 1203 aa7.7□□□□□ -1.18
BRCA1-207ENST00000461798 MDH2P40926 338 aaKnown RBP7.7□□□□□ -1.18
BRCA1-207ENST00000461798 CENPAP49450 140 aa7.7□□□□□ -1.18
BRCA1-207ENST00000461798 SRP9P49458 86 aaKnown RBP7.7□□□□□ -1.18
BRCA1-207ENST00000461798 COMPP49747 757 aaPredicted RBP7.7□□□□□ -1.18
BRCA1-207ENST00000461798 GYS2P54840 703 aa7.7□□□□□ -1.18
BRCA1-207ENST00000461798 BTG1P62324 171 aa7.7□□□□□ -1.18
BRCA1-207ENST00000461798 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.7□□□□□ -1.18
BRCA1-207ENST00000461798 HLXQ14774 488 aaPredicted RBP7.7□□□□□ -1.18
BRCA1-207ENST00000461798 ZMYND11Q15326 602 aa7.7□□□□□ -1.18
BRCA1-207ENST00000461798 CFAP77Q6ZQR2 320 aa7.7□□□□□ -1.18
BRCA1-207ENST00000461798 RASSF6Q6ZTQ3 369 aa7.7□□□□□ -1.18
BRCA1-207ENST00000461798 MUC20Q8N307 709 aaPredicted RBP7.7□□□□□ -1.18
BRCA1-207ENST00000461798 KLHL36Q8N4N3 616 aa7.7□□□□□ -1.18
BRCA1-207ENST00000461798 CELF2-AS1Q8N7Q2 184 aa7.7□□□□□ -1.18
BRCA1-207ENST00000461798 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.7□□□□□ -1.18
BRCA1-207ENST00000461798 ATG16L2Q8NAA4 619 aa7.7□□□□□ -1.18
BRCA1-207ENST00000461798 DEFB108BQ8NET1 73 aa7.7□□□□□ -1.18
BRCA1-207ENST00000461798 OR52E2Q8NGJ4 325 aa7.7□□□□□ -1.18
BRCA1-207ENST00000461798 FAM216AQ8WUB2 273 aa7.7□□□□□ -1.18
BRCA1-207ENST00000461798 POP5Q969H6 163 aaKnown RBP7.7□□□□□ -1.18
BRCA1-207ENST00000461798 MEGF10Q96KG7 1140 aa7.7□□□□□ -1.18
BRCA1-207ENST00000461798 JMJD8Q96S16 334 aa7.7□□□□□ -1.18
BRCA1-207ENST00000461798 PITX2Q99697 317 aa7.7□□□□□ -1.18
BRCA1-207ENST00000461798 CDADC1Q9BWV3 514 aa7.7□□□□□ -1.18
BRCA1-207ENST00000461798 MUC13Q9H3R2 512 aa7.7□□□□□ -1.18
BRCA1-207ENST00000461798 MAGIXQ9H6Y5 334 aa7.7□□□□□ -1.18
BRCA1-207ENST00000461798 TMEM165Q9HC07 324 aa7.7□□□□□ -1.18
BRCA1-207ENST00000461798 RPRD1BQ9NQG5 326 aaKnown RBP7.7□□□□□ -1.18
BRCA1-207ENST00000461798 UBAP1Q9NZ09 502 aa7.7□□□□□ -1.18
BRCA1-207ENST00000461798 PTTG3PQ9NZH4 202 aa7.7□□□□□ -1.18
BRCA1-207ENST00000461798 CDH10Q9Y6N8 788 aa7.7□□□□□ -1.18
BRCA1-207ENST00000461798 TCRBV5S2A0A599 114 aa7.69□□□□□ -1.18
BRCA1-207ENST00000461798 B2RBV5 119 aa7.69□□□□□ -1.18
BRCA1-207ENST00000461798 TRAPPC2LH3BP13 241 aa7.69□□□□□ -1.18
BRCA1-207ENST00000461798 MLNRO43193 412 aa7.69□□□□□ -1.18
BRCA1-207ENST00000461798 GASTP01350 101 aa7.69□□□□□ -1.18
BRCA1-207ENST00000461798 ZNF12P17014 697 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms