RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 HIST2H3AQ71DI3 136 aa13.1□□□□□ -0.31
VARS-219ENST00000461328 LINC01356Q8N9X3 169 aa13.1□□□□□ -0.31
VARS-219ENST00000461328 APOBEC3DQ96AK3 386 aaPredicted RBP13.1□□□□□ -0.31
VARS-219ENST00000461328 ELMOD3Q96FG2 381 aa13.1□□□□□ -0.31
VARS-219ENST00000461328 PLEKHA8Q96JA3 519 aa13.1□□□□□ -0.31
VARS-219ENST00000461328 MDFIQ99750 246 aa13.1□□□□□ -0.31
VARS-219ENST00000461328 TEX12Q9BXU0 123 aa13.1□□□□□ -0.31
VARS-219ENST00000461328 EGLN1Q9GZT9 426 aa13.1□□□□□ -0.31
VARS-219ENST00000461328 MSL2Q9HCI7 577 aa13.1□□□□□ -0.31
VARS-219ENST00000461328 TUBG2Q9NRH3 451 aa13.1□□□□□ -0.31
VARS-219ENST00000461328 NKIRAS2Q9NYR9 191 aa13.1□□□□□ -0.31
VARS-219ENST00000461328 PURGQ9UJV8 347 aaKnown RBP13.1□□□□□ -0.31
VARS-219ENST00000461328 IGHV1-69-2A0A0G2JMI3 117 aa13.09□□□□□ -0.31
VARS-219ENST00000461328 FAM183AA6NL82 134 aa13.09□□□□□ -0.31
VARS-219ENST00000461328 TNFSF4P23510 183 aa13.09□□□□□ -0.31
VARS-219ENST00000461328 SLC6A9P48067 706 aa13.09□□□□□ -0.31
VARS-219ENST00000461328 ENTPD1P49961 510 aa13.09□□□□□ -0.31
VARS-219ENST00000461328 MMP15P51511 669 aa13.09□□□□□ -0.31
VARS-219ENST00000461328 TMEM33P57088 247 aa13.09□□□□□ -0.31
VARS-219ENST00000461328 GINS1Q14691 196 aa13.09□□□□□ -0.31
VARS-219ENST00000461328 FAM120AOSQ5T036 256 aa13.09□□□□□ -0.31
VARS-219ENST00000461328 ZNF362Q5T0B9 420 aaPredicted RBP13.09□□□□□ -0.31
VARS-219ENST00000461328 CCDC121Q6ZUS5 278 aa13.09□□□□□ -0.31
VARS-219ENST00000461328 IL17RELQ6ZVW7 336 aa13.09□□□□□ -0.31
VARS-219ENST00000461328 OR5AS1Q8N127 324 aa13.09□□□□□ -0.31
VARS-219ENST00000461328 ZNF511Q8NB15 262 aa13.09□□□□□ -0.31
VARS-219ENST00000461328 ZNRF4Q8WWF5 429 aa13.09□□□□□ -0.31
VARS-219ENST00000461328 CMBLQ96DG6 245 aa13.09□□□□□ -0.31
VARS-219ENST00000461328 DIRC2Q96SL1 478 aa13.09□□□□□ -0.31
VARS-219ENST00000461328 DDOQ99489 341 aa13.09□□□□□ -0.31
VARS-219ENST00000461328 COPS4Q9BT78 406 aa13.09□□□□□ -0.31
VARS-219ENST00000461328 MED20Q9H944 212 aa13.09□□□□□ -0.31
VARS-219ENST00000461328 WDR76Q9H967 626 aa13.09□□□□□ -0.31
VARS-219ENST00000461328 CLDN25C9JDP6 229 aa13.08□□□□□ -0.32
VARS-219ENST00000461328 PRR23D1E9PI22 279 aaPredicted RBP13.08□□□□□ -0.32
VARS-219ENST00000461328 RP2O75695 350 aa13.08□□□□□ -0.32
VARS-219ENST00000461328 LCATP04180 440 aa13.08□□□□□ -0.32
VARS-219ENST00000461328 PRR23D2P0DMB1 279 aaPredicted RBP13.08□□□□□ -0.32
VARS-219ENST00000461328 SRD5A1P18405 259 aa13.08□□□□□ -0.32
VARS-219ENST00000461328 BLVRAP53004 296 aa13.08□□□□□ -0.32
VARS-219ENST00000461328 CDH15P55291 814 aa13.08□□□□□ -0.32
VARS-219ENST00000461328 TPTEP56180 551 aa13.08□□□□□ -0.32
VARS-219ENST00000461328 TNFAIP6P98066 277 aaPredicted RBP13.08□□□□□ -0.32
VARS-219ENST00000461328 HLXQ14774 488 aaPredicted RBP13.08□□□□□ -0.32
VARS-219ENST00000461328 TAF13Q15543 124 aa13.08□□□□□ -0.32
VARS-219ENST00000461328 ATP6AP1Q15904 470 aa13.08□□□□□ -0.32
VARS-219ENST00000461328 HFEQ30201 348 aa13.08□□□□□ -0.32
VARS-219ENST00000461328 DCXRQ7Z4W1 244 aa13.08□□□□□ -0.32
VARS-219ENST00000461328 OR2Z1Q8NG97 314 aa13.08□□□□□ -0.32
VARS-219ENST00000461328 OR5K1Q8NHB7 308 aa13.08□□□□□ -0.32
VARS-219ENST00000461328 CLDND2Q8NHS1 167 aa13.08□□□□□ -0.32
VARS-219ENST00000461328 DNAJC9Q8WXX5 260 aa13.08□□□□□ -0.32
VARS-219ENST00000461328 PTP4A1Q93096 173 aa13.08□□□□□ -0.32
VARS-219ENST00000461328 SPTSSAQ969W0 71 aa13.08□□□□□ -0.32
VARS-219ENST00000461328 NRBF2Q96F24 287 aa13.08□□□□□ -0.32
VARS-219ENST00000461328 MAP6Q96JE9 813 aa13.08□□□□□ -0.32
VARS-219ENST00000461328 NMNAT2Q9BZQ4 307 aa13.08□□□□□ -0.32
VARS-219ENST00000461328 OR51V1Q9H2C8 321 aa13.08□□□□□ -0.32
VARS-219ENST00000461328 PNRC2Q9NPJ4 139 aaKnown RBP13.08□□□□□ -0.32
VARS-219ENST00000461328 PAPOLBQ9NRJ5 636 aaKnown RBP13.08□□□□□ -0.32
VARS-219ENST00000461328 CENPMQ9NSP4 180 aa13.08□□□□□ -0.32
VARS-219ENST00000461328 ZDHHC8Q9ULC8 765 aa13.08□□□□□ -0.32
VARS-219ENST00000461328 MALRD1Q5VYJ5 2156 aa13.07□□□□□ -0.32
VARS-219ENST00000461328 M0R135 149 aa13.07□□□□□ -0.32
VARS-219ENST00000461328 ZNF593O00488 134 aaPredicted RBP13.07□□□□□ -0.32
VARS-219ENST00000461328 HMGN1P05114 100 aa13.07□□□□□ -0.32
VARS-219ENST00000461328 ACSM4P0C7M7 580 aa13.07□□□□□ -0.32
VARS-219ENST00000461328 FCGR1AP12314 374 aa13.07□□□□□ -0.32
VARS-219ENST00000461328 RAC2P15153 192 aa13.07□□□□□ -0.32
VARS-219ENST00000461328 KITLGP21583 273 aa13.07□□□□□ -0.32
VARS-219ENST00000461328 FASP25445 335 aa13.07□□□□□ -0.32
VARS-219ENST00000461328 CRYBB2P43320 205 aa13.07□□□□□ -0.32
VARS-219ENST00000461328 MALLQ13021 153 aa13.07□□□□□ -0.32
VARS-219ENST00000461328 CR1LQ2VPA4 569 aa13.07□□□□□ -0.32
VARS-219ENST00000461328 AVPI1Q5T686 147 aa13.07□□□□□ -0.32
VARS-219ENST00000461328 OR2T2Q6IF00 324 aa13.07□□□□□ -0.32
VARS-219ENST00000461328 PLBD1Q6P4A8 553 aa13.07□□□□□ -0.32
VARS-219ENST00000461328 ERI1Q8IV48 349 aaKnown RBP13.07□□□□□ -0.32
VARS-219ENST00000461328 OR6N2Q8NGY6 317 aa13.07□□□□□ -0.32
VARS-219ENST00000461328 CCL17Q92583 94 aa13.07□□□□□ -0.32
VARS-219ENST00000461328 HAVCR1Q96D42 359 aa13.07□□□□□ -0.32
VARS-219ENST00000461328 ZNF799Q96GE5 643 aa13.07□□□□□ -0.32
VARS-219ENST00000461328 TIMD4Q96H15 378 aa13.07□□□□□ -0.32
VARS-219ENST00000461328 INTS14Q96SY0 518 aa13.07□□□□□ -0.32
VARS-219ENST00000461328 HCAR1Q9BXC0 346 aa13.07□□□□□ -0.32
VARS-219ENST00000461328 TREM2Q9NZC2 230 aa13.07□□□□□ -0.32
VARS-219ENST00000461328 AP4S1Q9Y587 144 aa13.07□□□□□ -0.32
VARS-219ENST00000461328 WNT9BO14905 357 aa13.06□□□□□ -0.32
VARS-219ENST00000461328 PSKH1P11801 424 aa13.06□□□□□ -0.32
VARS-219ENST00000461328 GSTT1P30711 240 aa13.06□□□□□ -0.32
VARS-219ENST00000461328 RPS7P62081 194 aaKnown RBP13.06□□□□□ -0.32
VARS-219ENST00000461328 MVKQ03426 396 aa13.06□□□□□ -0.32
VARS-219ENST00000461328 EIF2B1Q14232 305 aaKnown RBP13.06□□□□□ -0.32
VARS-219ENST00000461328 KLHL12Q53G59 568 aa13.06□□□□□ -0.32
VARS-219ENST00000461328 ACSM5Q6NUN0 579 aa13.06□□□□□ -0.32
VARS-219ENST00000461328 FBXW12Q6X9E4 464 aa13.06□□□□□ -0.32
VARS-219ENST00000461328 SPATC1Q76KD6 591 aa13.06□□□□□ -0.32
VARS-219ENST00000461328 CXXC5Q7LFL8 322 aaKnown RBP13.06□□□□□ -0.32
VARS-219ENST00000461328 MRPL21Q7Z2W9 205 aaKnown RBP13.06□□□□□ -0.32
VARS-219ENST00000461328 BHLHE23Q8NDY6 225 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms