RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 QDPRP09417 244 aa8.2□□□□□ -1.1
BRCA1-205ENST00000461221 AREGP15514 252 aa8.2□□□□□ -1.1
BRCA1-205ENST00000461221 RPS19P39019 145 aaKnown RBP8.2□□□□□ -1.1
BRCA1-205ENST00000461221 LIPNQ5VXI9 398 aa8.2□□□□□ -1.1
BRCA1-205ENST00000461221 TIPARPQ7Z3E1 657 aaKnown RBP8.2□□□□□ -1.1
BRCA1-205ENST00000461221 CMTM4Q8IZR5 234 aa8.2□□□□□ -1.1
BRCA1-205ENST00000461221 MOB3AQ96BX8 217 aa8.2□□□□□ -1.1
BRCA1-205ENST00000461221 SARAFQ96BY9 339 aa8.2□□□□□ -1.1
BRCA1-205ENST00000461221 NTNG1Q9Y2I2 539 aa8.2□□□□□ -1.1
BRCA1-205ENST00000461221 ZNF785A8K8V0 405 aa8.2□□□□□ -1.1
BRCA1-205ENST00000461221 M0R082 166 aa8.2□□□□□ -1.1
BRCA1-205ENST00000461221 MGMTP16455 207 aa8.2□□□□□ -1.1
BRCA1-205ENST00000461221 SHHQ15465 462 aa8.2□□□□□ -1.1
BRCA1-205ENST00000461221 NKAIN2Q5VXU1 208 aa8.2□□□□□ -1.1
BRCA1-205ENST00000461221 AMIGO3Q86WK7 504 aa8.2□□□□□ -1.1
BRCA1-205ENST00000461221 TMEM130Q8N3G9 435 aa8.2□□□□□ -1.1
BRCA1-205ENST00000461221 ZDHHC16Q969W1 377 aa8.2□□□□□ -1.1
BRCA1-205ENST00000461221 POM121L2Q96KW2 1035 aa8.2□□□□□ -1.1
BRCA1-205ENST00000461221 TECTBQ96PL2 329 aa8.2□□□□□ -1.1
BRCA1-205ENST00000461221 FIZ1Q96SL8 496 aa8.2□□□□□ -1.1
BRCA1-205ENST00000461221 ZIC5Q96T25 663 aa8.2□□□□□ -1.1
BRCA1-205ENST00000461221 PARD6AQ9NPB6 346 aa8.2□□□□□ -1.1
BRCA1-205ENST00000461221 PARP4Q9UKK3 1724 aaKnown RBP8.2□□□□□ -1.1
BRCA1-205ENST00000461221 FAM166BA8MTA8 275 aa8.2□□□□□ -1.1
BRCA1-205ENST00000461221 M0R135 149 aa8.2□□□□□ -1.1
BRCA1-205ENST00000461221 ORM1P02763 201 aa8.2□□□□□ -1.1
BRCA1-205ENST00000461221 OR5H8P0DN80 308 aa8.2□□□□□ -1.1
BRCA1-205ENST00000461221 GPX2P18283 190 aa8.2□□□□□ -1.1
BRCA1-205ENST00000461221 RACK1P63244 317 aaKnown RBP8.2□□□□□ -1.1
BRCA1-205ENST00000461221 OXA1LQ15070 435 aa8.2□□□□□ -1.1
BRCA1-205ENST00000461221 FAM78AQ5JUQ0 283 aa8.2□□□□□ -1.1
BRCA1-205ENST00000461221 CYHR1Q6ZMK1 362 aa8.2□□□□□ -1.1
BRCA1-205ENST00000461221 BAP18Q8IXM2 172 aa8.2□□□□□ -1.1
BRCA1-205ENST00000461221 ZDHHC23Q8IYP9 409 aa8.2□□□□□ -1.1
BRCA1-205ENST00000461221 BCL2L2Q92843 193 aaPredicted RBP8.2□□□□□ -1.1
BRCA1-205ENST00000461221 ZNF799Q96GE5 643 aa8.2□□□□□ -1.1
BRCA1-205ENST00000461221 FYTTD1Q96QD9 318 aaKnown RBP8.2□□□□□ -1.1
BRCA1-205ENST00000461221 LAT2Q9GZY6 243 aa8.2□□□□□ -1.1
BRCA1-205ENST00000461221 PDLIM7Q9NR12 457 aa8.2□□□□□ -1.1
BRCA1-205ENST00000461221 CLEC2DQ9UHP7 191 aa8.2□□□□□ -1.1
BRCA1-205ENST00000461221 A0A1W2PPQ1 181 aa8.19□□□□□ -1.1
BRCA1-205ENST00000461221 ANKUB1A6NFN9 424 aa8.19□□□□□ -1.1
BRCA1-205ENST00000461221 ACOT8O14734 319 aa8.19□□□□□ -1.1
BRCA1-205ENST00000461221 LY86O95711 162 aa8.19□□□□□ -1.1
BRCA1-205ENST00000461221 STAG3L2P0CL84 134 aa8.19□□□□□ -1.1
BRCA1-205ENST00000461221 OR2B8PP59922 312 aa8.19□□□□□ -1.1
BRCA1-205ENST00000461221 OR2B11Q5JQS5 317 aa8.19□□□□□ -1.1
BRCA1-205ENST00000461221 MORN1Q5T089 497 aa8.19□□□□□ -1.1
BRCA1-205ENST00000461221 ZNF574Q6ZN55 896 aaPredicted RBP8.19□□□□□ -1.1
BRCA1-205ENST00000461221 COMMD1Q8N668 190 aa8.19□□□□□ -1.1
BRCA1-205ENST00000461221 UBE2ZQ9H832 354 aaPredicted RBP8.19□□□□□ -1.1
BRCA1-205ENST00000461221 CRLF2Q9HC73 371 aa8.19□□□□□ -1.1
BRCA1-205ENST00000461221 A0A1B0GUH1 482 aa8.19□□□□□ -1.1
BRCA1-205ENST00000461221 ANKRD61A6NGH8 418 aa8.19□□□□□ -1.1
BRCA1-205ENST00000461221 GOSR1O95249 250 aa8.19□□□□□ -1.1
BRCA1-205ENST00000461221 POLR2IP36954 125 aaKnown RBP8.19□□□□□ -1.1
BRCA1-205ENST00000461221 NOVA1P51513 510 aaKnown RBP8.19□□□□□ -1.1
BRCA1-205ENST00000461221 PJVKQ0ZLH3 352 aa8.19□□□□□ -1.1
BRCA1-205ENST00000461221 CEBPEQ15744 281 aa8.19□□□□□ -1.1
BRCA1-205ENST00000461221 SYT14P1Q58G82 188 aa8.19□□□□□ -1.1
BRCA1-205ENST00000461221 NHSL2Q5HYW2 709 aa8.19□□□□□ -1.1
BRCA1-205ENST00000461221 SAXO2Q658L1 398 aa8.19□□□□□ -1.1
BRCA1-205ENST00000461221 LYG2Q86SG7 212 aa8.19□□□□□ -1.1
BRCA1-205ENST00000461221 SYS1Q8N2H4 156 aa8.19□□□□□ -1.1
BRCA1-205ENST00000461221 LKAAEAR1Q8TD35 194 aa8.19□□□□□ -1.1
BRCA1-205ENST00000461221 ERGIC1Q969X5 290 aa8.19□□□□□ -1.1
BRCA1-205ENST00000461221 CMBLQ96DG6 245 aa8.19□□□□□ -1.1
BRCA1-205ENST00000461221 MED18Q9BUE0 208 aa8.19□□□□□ -1.1
BRCA1-205ENST00000461221 GABARAPL1Q9H0R8 117 aa8.19□□□□□ -1.1
BRCA1-205ENST00000461221 BOLA1Q9Y3E2 137 aa8.19□□□□□ -1.1
BRCA1-205ENST00000461221 M0R1B8 84 aa8.19□□□□□ -1.1
BRCA1-205ENST00000461221 SLCO2B1O94956 709 aa8.19□□□□□ -1.1
BRCA1-205ENST00000461221 HPP00738 406 aa8.19□□□□□ -1.1
BRCA1-205ENST00000461221 LBX1P52954 281 aa8.19□□□□□ -1.1
BRCA1-205ENST00000461221 ERVFC1-1P60608 527 aa8.19□□□□□ -1.1
BRCA1-205ENST00000461221 IQCJQ1A5X6 159 aa8.19□□□□□ -1.1
BRCA1-205ENST00000461221 VMA21Q3ZAQ7 101 aa8.19□□□□□ -1.1
BRCA1-205ENST00000461221 BCDIN3DQ7Z5W3 292 aaKnown RBP8.19□□□□□ -1.1
BRCA1-205ENST00000461221 CAMKMTQ7Z624 323 aa8.19□□□□□ -1.1
BRCA1-205ENST00000461221 ATOH1Q92858 354 aaPredicted RBP8.19□□□□□ -1.1
BRCA1-205ENST00000461221 NXPE3Q969Y0 559 aa8.19□□□□□ -1.1
BRCA1-205ENST00000461221 CMC2Q9NRP2 79 aa8.19□□□□□ -1.1
BRCA1-205ENST00000461221 TARM1B6A8C7 271 aa8.19□□□□□ -1.1
BRCA1-205ENST00000461221 TOX3O15405 576 aaPredicted RBP8.19□□□□□ -1.1
BRCA1-205ENST00000461221 PRKRAO75569 313 aaKnown RBP8.19□□□□□ -1.1
BRCA1-205ENST00000461221 PCBP4P57723 403 aaKnown RBP8.19□□□□□ -1.1
BRCA1-205ENST00000461221 PAX5Q02548 391 aa8.19□□□□□ -1.1
BRCA1-205ENST00000461221 MLF2Q15773 248 aaPredicted RBP8.19□□□□□ -1.1
BRCA1-205ENST00000461221 TRNP1Q6NT89 227 aa8.19□□□□□ -1.1
BRCA1-205ENST00000461221 BTNL3Q6UXE8 466 aa8.19□□□□□ -1.1
BRCA1-205ENST00000461221 LILRA2Q8N149 483 aa8.19□□□□□ -1.1
BRCA1-205ENST00000461221 C17orf78Q8N4C9 275 aa8.19□□□□□ -1.1
BRCA1-205ENST00000461221 VN1R2Q8NFZ6 395 aa8.19□□□□□ -1.1
BRCA1-205ENST00000461221 SLC39A13Q96H72 371 aa8.19□□□□□ -1.1
BRCA1-205ENST00000461221 S1PR5Q9H228 398 aa8.19□□□□□ -1.1
BRCA1-205ENST00000461221 R4GMQ9 66 aa8.19□□□□□ -1.1
BRCA1-205ENST00000461221 GPR31O00270 319 aa8.18□□□□□ -1.1
BRCA1-205ENST00000461221 CD27P26842 260 aa8.18□□□□□ -1.1
BRCA1-205ENST00000461221 GPM6AP51674 278 aa8.18□□□□□ -1.1
BRCA1-205ENST00000461221 SNRPNP63162 240 aaKnown RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms