RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 GTF3AQ92664 365 aaKnown RBP12.09□□□□□ -0.47
HDAC4-205ENST00000454542 SLAMF6Q96DU3 332 aa12.09□□□□□ -0.47
HDAC4-205ENST00000454542 ZMYND19Q96E35 227 aaPredicted RBP12.09□□□□□ -0.47
HDAC4-205ENST00000454542 ZNF799Q96GE5 643 aa12.09□□□□□ -0.47
HDAC4-205ENST00000454542 RHNO1Q9BSD3 238 aa12.09□□□□□ -0.47
HDAC4-205ENST00000454542 REG4Q9BYZ8 158 aa12.09□□□□□ -0.47
HDAC4-205ENST00000454542 OR51V1Q9H2C8 321 aa12.09□□□□□ -0.47
HDAC4-205ENST00000454542 TVP23BQ9NYZ1 205 aa12.09□□□□□ -0.47
HDAC4-205ENST00000454542 GPR160Q9UJ42 338 aa12.09□□□□□ -0.47
HDAC4-205ENST00000454542 STARD10Q9Y365 291 aa12.09□□□□□ -0.47
HDAC4-205ENST00000454542 GRIP1Q9Y3R0 1128 aa12.09□□□□□ -0.47
HDAC4-205ENST00000454542 ZANQ9Y493 2812 aa12.09□□□□□ -0.47
HDAC4-205ENST00000454542 LOC390937A0A1W2PQ73 354 aa12.08□□□□□ -0.48
HDAC4-205ENST00000454542 RNF223E7ERA6 249 aa12.08□□□□□ -0.48
HDAC4-205ENST00000454542 EI24O14681 340 aa12.08□□□□□ -0.48
HDAC4-205ENST00000454542 SELENOFO60613 162 aa12.08□□□□□ -0.48
HDAC4-205ENST00000454542 DAOP14920 347 aa12.08□□□□□ -0.48
HDAC4-205ENST00000454542 RAC2P15153 192 aa12.08□□□□□ -0.48
HDAC4-205ENST00000454542 ANOS1P23352 680 aa12.08□□□□□ -0.48
HDAC4-205ENST00000454542 GABPB1Q06547 395 aaPredicted RBP12.08□□□□□ -0.48
HDAC4-205ENST00000454542 PCGF3Q3KNV8 242 aa12.08□□□□□ -0.48
HDAC4-205ENST00000454542 ALKBH6Q3KRA9 238 aa12.08□□□□□ -0.48
HDAC4-205ENST00000454542 FAM209AQ5JX71 171 aa12.08□□□□□ -0.48
HDAC4-205ENST00000454542 AADACL4Q5VUY2 407 aa12.08□□□□□ -0.48
HDAC4-205ENST00000454542 TMEM154Q6P9G4 183 aa12.08□□□□□ -0.48
HDAC4-205ENST00000454542 RHOUQ7L0Q8 258 aa12.08□□□□□ -0.48
HDAC4-205ENST00000454542 SHFQ7M4L6 423 aa12.08□□□□□ -0.48
HDAC4-205ENST00000454542 DPY19L4Q7Z388 723 aa12.08□□□□□ -0.48
HDAC4-205ENST00000454542 ERI1Q8IV48 349 aaKnown RBP12.08□□□□□ -0.48
HDAC4-205ENST00000454542 ZNF786Q8N393 782 aa12.08□□□□□ -0.48
HDAC4-205ENST00000454542 OTOSQ8NHW6 89 aa12.08□□□□□ -0.48
HDAC4-205ENST00000454542 TMEM163Q8TC26 289 aa12.08□□□□□ -0.48
HDAC4-205ENST00000454542 SNX33Q8WV41 574 aa12.08□□□□□ -0.48
HDAC4-205ENST00000454542 PLEKHA8Q96JA3 519 aa12.08□□□□□ -0.48
HDAC4-205ENST00000454542 AMELYQ99218 206 aa12.08□□□□□ -0.48
HDAC4-205ENST00000454542 CYSLTR2Q9NS75 346 aa12.08□□□□□ -0.48
HDAC4-205ENST00000454542 PURGQ9UJV8 347 aaKnown RBP12.08□□□□□ -0.48
HDAC4-205ENST00000454542 MTORP42345 2549 aa12.07□□□□□ -0.48
HDAC4-205ENST00000454542 A0A1B0GWJ7 208 aa12.07□□□□□ -0.48
HDAC4-205ENST00000454542 M0R129 80 aa12.07□□□□□ -0.48
HDAC4-205ENST00000454542 RP2O75695 350 aa12.07□□□□□ -0.48
HDAC4-205ENST00000454542 HPXP02790 462 aa12.07□□□□□ -0.48
HDAC4-205ENST00000454542 CD55P08174 381 aa12.07□□□□□ -0.48
HDAC4-205ENST00000454542 POLR2IP36954 125 aaKnown RBP12.07□□□□□ -0.48
HDAC4-205ENST00000454542 LIPAP38571 399 aa12.07□□□□□ -0.48
HDAC4-205ENST00000454542 OPRL1P41146 370 aa12.07□□□□□ -0.48
HDAC4-205ENST00000454542 MAGEB1P43366 347 aa12.07□□□□□ -0.48
HDAC4-205ENST00000454542 ALDH3A2P51648 485 aa12.07□□□□□ -0.48
HDAC4-205ENST00000454542 TPTEP56180 551 aa12.07□□□□□ -0.48
HDAC4-205ENST00000454542 LOXL1Q08397 574 aaPredicted RBP12.07□□□□□ -0.48
HDAC4-205ENST00000454542 RIN1Q13671 783 aa12.07□□□□□ -0.48
HDAC4-205ENST00000454542 APOFQ13790 326 aa12.07□□□□□ -0.48
HDAC4-205ENST00000454542 NXNL2Q5VZ03 156 aa12.07□□□□□ -0.48
HDAC4-205ENST00000454542 DRAM2Q6UX65 266 aa12.07□□□□□ -0.48
HDAC4-205ENST00000454542 ZNF454Q8N9F8 522 aa12.07□□□□□ -0.48
HDAC4-205ENST00000454542 UBASH3BQ8TF42 649 aa12.07□□□□□ -0.48
HDAC4-205ENST00000454542 SPTSSAQ969W0 71 aa12.07□□□□□ -0.48
HDAC4-205ENST00000454542 HAVCR1Q96D42 359 aa12.07□□□□□ -0.48
HDAC4-205ENST00000454542 KCNJ15Q99712 375 aa12.07□□□□□ -0.48
HDAC4-205ENST00000454542 PIMREGQ9BSJ6 248 aa12.07□□□□□ -0.48
HDAC4-205ENST00000454542 ABHD6Q9BV23 337 aa12.07□□□□□ -0.48
HDAC4-205ENST00000454542 F5H5K5 113 aa12.06□□□□□ -0.48
HDAC4-205ENST00000454542 IGHV1-46P01743 117 aa12.06□□□□□ -0.48
HDAC4-205ENST00000454542 MT-ND5P03915 603 aa12.06□□□□□ -0.48
HDAC4-205ENST00000454542 HEXAP06865 529 aa12.06□□□□□ -0.48
HDAC4-205ENST00000454542 ACHEP22303 614 aa12.06□□□□□ -0.48
HDAC4-205ENST00000454542 NR4A2P43354 598 aa12.06□□□□□ -0.48
HDAC4-205ENST00000454542 ZNF81P51508 661 aa12.06□□□□□ -0.48
HDAC4-205ENST00000454542 GRB2P62993 217 aaKnown RBP12.06□□□□□ -0.48
HDAC4-205ENST00000454542 EIF2B1Q14232 305 aaKnown RBP12.06□□□□□ -0.48
HDAC4-205ENST00000454542 KLHL12Q53G59 568 aa12.06□□□□□ -0.48
HDAC4-205ENST00000454542 ZMAT1Q5H9K5 638 aa12.06□□□□□ -0.48
HDAC4-205ENST00000454542 LCN1P1Q5VSP4 162 aa12.06□□□□□ -0.48
HDAC4-205ENST00000454542 Q6ZR03 302 aa12.06□□□□□ -0.48
HDAC4-205ENST00000454542 PRSS45Q7RTY3 260 aa12.06□□□□□ -0.48
HDAC4-205ENST00000454542 CBR4Q8N4T8 237 aa12.06□□□□□ -0.48
HDAC4-205ENST00000454542 TCEANCQ8N8B7 351 aa12.06□□□□□ -0.48
HDAC4-205ENST00000454542 OR5L1Q8NGL2 311 aa12.06□□□□□ -0.48
HDAC4-205ENST00000454542 YIPF5Q969M3 257 aa12.06□□□□□ -0.48
HDAC4-205ENST00000454542 OTULINQ96BN8 352 aa12.06□□□□□ -0.48
HDAC4-205ENST00000454542 SMR3AQ99954 134 aa12.06□□□□□ -0.48
HDAC4-205ENST00000454542 COPS4Q9BT78 406 aa12.06□□□□□ -0.48
HDAC4-205ENST00000454542 BPESC1Q9GZL8 116 aa12.06□□□□□ -0.48
HDAC4-205ENST00000454542 TOR3AQ9H497 397 aa12.06□□□□□ -0.48
HDAC4-205ENST00000454542 RIBC2Q9H4K1 309 aa12.06□□□□□ -0.48
HDAC4-205ENST00000454542 GSX1Q9H4S2 264 aaPredicted RBP12.06□□□□□ -0.48
HDAC4-205ENST00000454542 PTTG3PQ9NZH4 202 aa12.06□□□□□ -0.48
HDAC4-205ENST00000454542 KLHDC2Q9Y2U9 406 aa12.06□□□□□ -0.48
HDAC4-205ENST00000454542 NSD1Q96L73 2696 aaPredicted RBP12.05□□□□□ -0.48
HDAC4-205ENST00000454542 IQCF6A8MYZ5 107 aa12.05□□□□□ -0.48
HDAC4-205ENST00000454542 SMAD7O15105 426 aaKnown RBP12.05□□□□□ -0.48
HDAC4-205ENST00000454542 TIMM8AO60220 97 aaPredicted RBP12.05□□□□□ -0.48
HDAC4-205ENST00000454542 LYNP07948 512 aa12.05□□□□□ -0.48
HDAC4-205ENST00000454542 NAA10P41227 235 aaPredicted RBP12.05□□□□□ -0.48
HDAC4-205ENST00000454542 CDK5R2Q13319 367 aa12.05□□□□□ -0.48
HDAC4-205ENST00000454542 GK2Q14410 553 aaPredicted RBP12.05□□□□□ -0.48
HDAC4-205ENST00000454542 HLXQ14774 488 aaPredicted RBP12.05□□□□□ -0.48
HDAC4-205ENST00000454542 ZSCAN26Q16670 478 aa12.05□□□□□ -0.48
HDAC4-205ENST00000454542 SNAI3Q3KNW1 292 aa12.05□□□□□ -0.48
HDAC4-205ENST00000454542 SLC16A9Q7RTY1 509 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms